Experiment: LB in EcoFAB_3.5mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02876 and H281DRAFT_02877 are separated by 35 nucleotides H281DRAFT_02877 and H281DRAFT_02878 are separated by 193 nucleotides H281DRAFT_02878 and H281DRAFT_02879 are separated by 9 nucleotides H281DRAFT_02879 and H281DRAFT_02880 are separated by 109 nucleotides
H281DRAFT_02876: H281DRAFT_02876 - transcriptional regulator, LysR family, at 473,760 to 474,701
_02876
H281DRAFT_02877: H281DRAFT_02877 - transcriptional regulator, LuxR family, at 474,737 to 475,483
_02877
H281DRAFT_02878: H281DRAFT_02878 - response regulator receiver sensor signal transduction histidine kinase, at 475,677 to 476,804
_02878
H281DRAFT_02879: H281DRAFT_02879 - CheB methylesterase, at 476,814 to 477,341
_02879
H281DRAFT_02880: H281DRAFT_02880 - chemotaxis protein methyltransferase CheR, at 477,451 to 478,296
_02880
Position (kb) 475
476
477 Strain fitness (log2 ratio) -1
0
1 at 474.804 kb on + strand at 474.804 kb on + strand at 474.819 kb on + strand, within H281DRAFT_02877 at 474.920 kb on - strand, within H281DRAFT_02877 at 475.091 kb on + strand, within H281DRAFT_02877 at 475.092 kb on - strand, within H281DRAFT_02877 at 475.092 kb on - strand, within H281DRAFT_02877 at 475.290 kb on + strand, within H281DRAFT_02877 at 475.679 kb on - strand at 475.876 kb on - strand, within H281DRAFT_02878 at 476.057 kb on + strand, within H281DRAFT_02878 at 476.082 kb on - strand, within H281DRAFT_02878 at 476.130 kb on + strand, within H281DRAFT_02878 at 476.750 kb on + strand at 476.750 kb on + strand at 476.872 kb on + strand, within H281DRAFT_02879 at 476.873 kb on - strand, within H281DRAFT_02879 at 477.159 kb on + strand, within H281DRAFT_02879 at 477.159 kb on + strand, within H281DRAFT_02879 at 477.159 kb on + strand at 477.465 kb on - strand at 477.468 kb on + strand at 477.468 kb on + strand at 477.615 kb on - strand, within H281DRAFT_02880 at 477.747 kb on - strand, within H281DRAFT_02880 at 477.785 kb on + strand, within H281DRAFT_02880
Per-strain Table
Position Strand Gene LocusTag Fraction LB in EcoFAB_3.5mL remove 474,804 + -0.3 474,804 + -0.3 474,819 + H281DRAFT_02877 0.11 -0.3 474,920 - H281DRAFT_02877 0.24 -1.2 475,091 + H281DRAFT_02877 0.47 -0.5 475,092 - H281DRAFT_02877 0.48 +0.9 475,092 - H281DRAFT_02877 0.48 -0.6 475,290 + H281DRAFT_02877 0.74 -1.0 475,679 - -0.5 475,876 - H281DRAFT_02878 0.18 +1.6 476,057 + H281DRAFT_02878 0.34 +0.1 476,082 - H281DRAFT_02878 0.36 +0.5 476,130 + H281DRAFT_02878 0.40 +0.1 476,750 + -0.5 476,750 + +0.6 476,872 + H281DRAFT_02879 0.11 +0.1 476,873 - H281DRAFT_02879 0.11 -1.2 477,159 + H281DRAFT_02879 0.65 +0.4 477,159 + H281DRAFT_02879 0.65 +1.5 477,159 + -0.6 477,465 - +0.5 477,468 + +0.1 477,468 + +0.0 477,615 - H281DRAFT_02880 0.19 +0.8 477,747 - H281DRAFT_02880 0.35 +0.1 477,785 + H281DRAFT_02880 0.39 +0.7
Or see this region's nucleotide sequence