Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07875 and BWI76_RS07880 are separated by 38 nucleotides BWI76_RS07880 and BWI76_RS07885 are separated by 11 nucleotides BWI76_RS07885 and BWI76_RS07890 overlap by 1 nucleotides BWI76_RS07890 and BWI76_RS07895 overlap by 4 nucleotides
BWI76_RS07875: BWI76_RS07875 - dihydrofolate reductase, at 1,671,520 to 1,672,548
_RS07875
BWI76_RS07880: BWI76_RS07880 - PfkB domain-containing protein, at 1,672,587 to 1,673,531
_RS07880
BWI76_RS07885: BWI76_RS07885 - sugar ABC transporter permease, at 1,673,543 to 1,674,544
_RS07885
BWI76_RS07890: BWI76_RS07890 - putative ABC-type sugar transport system permease component, at 1,674,544 to 1,675,530
_RS07890
BWI76_RS07895: BWI76_RS07895 - sugar ABC transporter ATPase, at 1,675,527 to 1,677,080
_RS07895
Position (kb)
1673
1674
1675 Strain fitness (log2 ratio)
-1
0
1
2 at 1672.789 kb on + strand, within BWI76_RS07880 at 1672.994 kb on + strand, within BWI76_RS07880 at 1673.002 kb on - strand, within BWI76_RS07880 at 1673.186 kb on + strand, within BWI76_RS07880 at 1673.186 kb on + strand, within BWI76_RS07880 at 1673.278 kb on - strand, within BWI76_RS07880 at 1673.524 kb on - strand at 1673.680 kb on + strand, within BWI76_RS07885 at 1673.754 kb on + strand, within BWI76_RS07885 at 1673.928 kb on - strand, within BWI76_RS07885 at 1674.113 kb on + strand, within BWI76_RS07885 at 1674.667 kb on + strand, within BWI76_RS07890 at 1674.667 kb on + strand, within BWI76_RS07890 at 1674.667 kb on + strand, within BWI76_RS07890 at 1674.675 kb on - strand, within BWI76_RS07890 at 1674.675 kb on - strand, within BWI76_RS07890 at 1674.897 kb on - strand at 1675.166 kb on - strand, within BWI76_RS07890 at 1675.234 kb on - strand, within BWI76_RS07890 at 1675.280 kb on - strand, within BWI76_RS07890 at 1675.309 kb on + strand, within BWI76_RS07890 at 1675.347 kb on + strand, within BWI76_RS07890 at 1675.355 kb on - strand, within BWI76_RS07890 at 1675.431 kb on + strand, within BWI76_RS07890
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 1,672,789 + BWI76_RS07880 0.21 -0.1 1,672,994 + BWI76_RS07880 0.43 -0.3 1,673,002 - BWI76_RS07880 0.44 -0.2 1,673,186 + BWI76_RS07880 0.63 +0.2 1,673,186 + BWI76_RS07880 0.63 -0.6 1,673,278 - BWI76_RS07880 0.73 +0.3 1,673,524 - +2.1 1,673,680 + BWI76_RS07885 0.14 +1.1 1,673,754 + BWI76_RS07885 0.21 -0.1 1,673,928 - BWI76_RS07885 0.38 -0.2 1,674,113 + BWI76_RS07885 0.57 -0.4 1,674,667 + BWI76_RS07890 0.12 -0.8 1,674,667 + BWI76_RS07890 0.12 -0.2 1,674,667 + BWI76_RS07890 0.12 +0.7 1,674,675 - BWI76_RS07890 0.13 -0.4 1,674,675 - BWI76_RS07890 0.13 -0.6 1,674,897 - +0.1 1,675,166 - BWI76_RS07890 0.63 -0.3 1,675,234 - BWI76_RS07890 0.70 -0.2 1,675,280 - BWI76_RS07890 0.75 +0.5 1,675,309 + BWI76_RS07890 0.78 -0.5 1,675,347 + BWI76_RS07890 0.81 -0.5 1,675,355 - BWI76_RS07890 0.82 -0.3 1,675,431 + BWI76_RS07890 0.90 +0.2
Or see this region's nucleotide sequence