Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS07800

Experiment: D-Ribose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS07795 and BWI76_RS07800 are separated by 160 nucleotidesBWI76_RS07800 and BWI76_RS07805 overlap by 4 nucleotides BWI76_RS07795: BWI76_RS07795 - oxidoreductase, at 1,651,747 to 1,652,835 _RS07795 BWI76_RS07800: BWI76_RS07800 - ABC transporter, at 1,652,996 to 1,654,498 _RS07800 BWI76_RS07805: BWI76_RS07805 - sugar ABC transporter permease, at 1,654,495 to 1,655,493 _RS07805 Position (kb) 1652 1653 1654 1655Strain fitness (log2 ratio) -1 0 1at 1652.061 kb on - strand, within BWI76_RS07795at 1652.160 kb on - strand, within BWI76_RS07795at 1652.161 kb on - strand, within BWI76_RS07795at 1652.237 kb on - strand, within BWI76_RS07795at 1652.552 kb on - strand, within BWI76_RS07795at 1652.711 kb on + strand, within BWI76_RS07795at 1652.719 kb on - strand, within BWI76_RS07795at 1652.724 kb on - strand, within BWI76_RS07795at 1652.747 kb on - strandat 1653.212 kb on - strand, within BWI76_RS07800at 1653.261 kb on - strand, within BWI76_RS07800at 1653.289 kb on - strand, within BWI76_RS07800at 1653.573 kb on - strand, within BWI76_RS07800at 1653.717 kb on + strand, within BWI76_RS07800at 1653.725 kb on - strand, within BWI76_RS07800at 1653.762 kb on + strand, within BWI76_RS07800at 1653.762 kb on + strand, within BWI76_RS07800at 1653.770 kb on - strand, within BWI76_RS07800at 1653.943 kb on - strand, within BWI76_RS07800at 1654.821 kb on - strand, within BWI76_RS07805at 1654.838 kb on - strand, within BWI76_RS07805at 1655.123 kb on - strand, within BWI76_RS07805

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Ribose (C)
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1,652,061 - BWI76_RS07795 0.29 -0.0
1,652,160 - BWI76_RS07795 0.38 -0.5
1,652,161 - BWI76_RS07795 0.38 +0.2
1,652,237 - BWI76_RS07795 0.45 -0.6
1,652,552 - BWI76_RS07795 0.74 -0.0
1,652,711 + BWI76_RS07795 0.89 +0.6
1,652,719 - BWI76_RS07795 0.89 -0.9
1,652,724 - BWI76_RS07795 0.90 +0.5
1,652,747 - -0.9
1,653,212 - BWI76_RS07800 0.14 -0.2
1,653,261 - BWI76_RS07800 0.18 -0.1
1,653,289 - BWI76_RS07800 0.19 -0.3
1,653,573 - BWI76_RS07800 0.38 +0.3
1,653,717 + BWI76_RS07800 0.48 -1.1
1,653,725 - BWI76_RS07800 0.49 +0.1
1,653,762 + BWI76_RS07800 0.51 -0.2
1,653,762 + BWI76_RS07800 0.51 +0.3
1,653,770 - BWI76_RS07800 0.51 -0.2
1,653,943 - BWI76_RS07800 0.63 -0.3
1,654,821 - BWI76_RS07805 0.33 -0.4
1,654,838 - BWI76_RS07805 0.34 -0.2
1,655,123 - BWI76_RS07805 0.63 +0.8

Or see this region's nucleotide sequence