Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_659 and Ac3H11_660 are separated by 62 nucleotides Ac3H11_660 and Ac3H11_661 are separated by 62 nucleotides Ac3H11_661 and Ac3H11_662 are separated by 34 nucleotides
Ac3H11_659 - FIG00348829: hypothetical protein, at 15,118 to 15,747
_659
Ac3H11_660 - hypothetical protein, at 15,810 to 16,349
_660
Ac3H11_661 - NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2), at 16,412 to 18,019
_661
Ac3H11_662 - NAD(P) transhydrogenase subunit beta (EC 1.6.1.2), at 18,054 to 19,466
_662
Position (kb) 16
17
18
19 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 15.505 kb on + strand, within Ac3H11_659 at 15.505 kb on + strand, within Ac3H11_659 at 15.505 kb on + strand, within Ac3H11_659 at 15.506 kb on - strand, within Ac3H11_659 at 15.511 kb on + strand, within Ac3H11_659 at 15.511 kb on + strand, within Ac3H11_659 at 15.511 kb on + strand, within Ac3H11_659 at 15.511 kb on + strand, within Ac3H11_659 at 15.511 kb on + strand, within Ac3H11_659 at 15.511 kb on + strand, within Ac3H11_659 at 15.520 kb on + strand, within Ac3H11_659 at 15.520 kb on + strand, within Ac3H11_659 at 15.697 kb on + strand at 15.698 kb on - strand at 15.746 kb on - strand at 15.773 kb on + strand at 15.774 kb on - strand at 15.963 kb on + strand, within Ac3H11_660 at 15.963 kb on + strand, within Ac3H11_660 at 15.963 kb on + strand, within Ac3H11_660 at 15.964 kb on - strand, within Ac3H11_660 at 15.964 kb on - strand, within Ac3H11_660 at 15.964 kb on - strand, within Ac3H11_660 at 15.964 kb on - strand, within Ac3H11_660 at 16.174 kb on + strand, within Ac3H11_660 at 16.174 kb on + strand, within Ac3H11_660 at 16.175 kb on - strand, within Ac3H11_660 at 16.175 kb on - strand, within Ac3H11_660 at 16.206 kb on + strand, within Ac3H11_660 at 16.206 kb on + strand, within Ac3H11_660 at 16.392 kb on + strand at 16.392 kb on + strand at 16.392 kb on + strand at 16.393 kb on - strand at 16.446 kb on + strand at 16.446 kb on + strand at 16.446 kb on + strand at 16.447 kb on - strand at 16.447 kb on - strand at 16.447 kb on - strand at 17.093 kb on + strand, within Ac3H11_661 at 17.093 kb on + strand, within Ac3H11_661 at 17.093 kb on + strand, within Ac3H11_661 at 17.093 kb on + strand, within Ac3H11_661 at 17.094 kb on - strand, within Ac3H11_661 at 17.094 kb on - strand, within Ac3H11_661 at 17.123 kb on + strand, within Ac3H11_661 at 17.171 kb on + strand, within Ac3H11_661 at 17.171 kb on + strand, within Ac3H11_661 at 17.171 kb on + strand, within Ac3H11_661 at 17.171 kb on + strand, within Ac3H11_661 at 17.171 kb on + strand, within Ac3H11_661 at 17.171 kb on + strand, within Ac3H11_661 at 17.171 kb on + strand, within Ac3H11_661 at 17.172 kb on - strand, within Ac3H11_661 at 17.172 kb on - strand, within Ac3H11_661 at 17.172 kb on - strand, within Ac3H11_661 at 17.172 kb on - strand, within Ac3H11_661 at 17.172 kb on - strand, within Ac3H11_661 at 17.172 kb on - strand, within Ac3H11_661 at 17.423 kb on + strand, within Ac3H11_661 at 17.424 kb on - strand, within Ac3H11_661 at 17.424 kb on - strand, within Ac3H11_661 at 17.717 kb on + strand, within Ac3H11_661 at 17.718 kb on - strand, within Ac3H11_661 at 17.718 kb on - strand, within Ac3H11_661 at 17.777 kb on + strand, within Ac3H11_661 at 17.777 kb on + strand, within Ac3H11_661 at 17.777 kb on + strand, within Ac3H11_661 at 17.777 kb on + strand, within Ac3H11_661 at 17.777 kb on + strand, within Ac3H11_661 at 17.778 kb on - strand, within Ac3H11_661 at 17.778 kb on - strand, within Ac3H11_661 at 17.778 kb on - strand, within Ac3H11_661 at 17.778 kb on - strand, within Ac3H11_661 at 18.017 kb on + strand at 18.017 kb on + strand at 18.017 kb on + strand at 18.018 kb on - strand at 18.018 kb on - strand at 18.018 kb on - strand at 18.082 kb on - strand at 18.082 kb on - strand at 18.276 kb on + strand, within Ac3H11_662 at 18.276 kb on + strand, within Ac3H11_662 at 18.276 kb on + strand, within Ac3H11_662 at 18.276 kb on + strand, within Ac3H11_662 at 18.277 kb on - strand, within Ac3H11_662 at 18.277 kb on - strand, within Ac3H11_662 at 18.375 kb on + strand, within Ac3H11_662 at 18.376 kb on - strand, within Ac3H11_662 at 18.376 kb on - strand, within Ac3H11_662 at 18.376 kb on - strand, within Ac3H11_662 at 18.383 kb on + strand, within Ac3H11_662 at 18.435 kb on + strand, within Ac3H11_662 at 18.435 kb on + strand, within Ac3H11_662 at 18.435 kb on + strand, within Ac3H11_662 at 18.435 kb on + strand, within Ac3H11_662 at 18.436 kb on - strand, within Ac3H11_662 at 18.436 kb on - strand, within Ac3H11_662 at 18.729 kb on + strand, within Ac3H11_662 at 18.729 kb on + strand, within Ac3H11_662 at 18.729 kb on + strand, within Ac3H11_662 at 18.729 kb on + strand, within Ac3H11_662 at 18.730 kb on - strand, within Ac3H11_662 at 18.730 kb on - strand, within Ac3H11_662 at 18.730 kb on - strand, within Ac3H11_662 at 18.730 kb on - strand, within Ac3H11_662 at 18.730 kb on - strand, within Ac3H11_662 at 18.783 kb on - strand, within Ac3H11_662 at 18.828 kb on + strand, within Ac3H11_662 at 18.828 kb on + strand, within Ac3H11_662 at 18.828 kb on + strand, within Ac3H11_662 at 18.829 kb on - strand, within Ac3H11_662 at 18.829 kb on - strand, within Ac3H11_662 at 18.829 kb on - strand, within Ac3H11_662 at 18.829 kb on - strand, within Ac3H11_662 at 18.829 kb on - strand, within Ac3H11_662 at 18.829 kb on - strand, within Ac3H11_662 at 18.829 kb on - strand, within Ac3H11_662
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 15,505 + Ac3H11_659 0.61 +1.9 15,505 + Ac3H11_659 0.61 +0.7 15,505 + Ac3H11_659 0.61 -2.0 15,506 - Ac3H11_659 0.62 -1.9 15,511 + Ac3H11_659 0.62 -0.9 15,511 + Ac3H11_659 0.62 +1.1 15,511 + Ac3H11_659 0.62 -1.2 15,511 + Ac3H11_659 0.62 -0.4 15,511 + Ac3H11_659 0.62 +2.9 15,511 + Ac3H11_659 0.62 -0.8 15,520 + Ac3H11_659 0.64 +0.2 15,520 + Ac3H11_659 0.64 -0.3 15,697 + -3.4 15,698 - -1.5 15,746 - -0.4 15,773 + -2.8 15,774 - +4.0 15,963 + Ac3H11_660 0.28 +1.0 15,963 + Ac3H11_660 0.28 +2.5 15,963 + Ac3H11_660 0.28 -0.1 15,964 - Ac3H11_660 0.29 -0.5 15,964 - Ac3H11_660 0.29 +1.3 15,964 - Ac3H11_660 0.29 +2.1 15,964 - Ac3H11_660 0.29 -1.5 16,174 + Ac3H11_660 0.67 -2.0 16,174 + Ac3H11_660 0.67 -0.5 16,175 - Ac3H11_660 0.68 +1.5 16,175 - Ac3H11_660 0.68 +1.6 16,206 + Ac3H11_660 0.73 +0.0 16,206 + Ac3H11_660 0.73 -2.3 16,392 + +1.0 16,392 + -1.4 16,392 + +3.0 16,393 - +0.9 16,446 + -0.7 16,446 + -3.2 16,446 + +0.7 16,447 - -0.5 16,447 - -1.8 16,447 - -0.1 17,093 + Ac3H11_661 0.42 -1.3 17,093 + Ac3H11_661 0.42 -0.2 17,093 + Ac3H11_661 0.42 -1.4 17,093 + Ac3H11_661 0.42 -0.5 17,094 - Ac3H11_661 0.42 -2.5 17,094 - Ac3H11_661 0.42 +0.9 17,123 + Ac3H11_661 0.44 -1.7 17,171 + Ac3H11_661 0.47 +2.5 17,171 + Ac3H11_661 0.47 +1.2 17,171 + Ac3H11_661 0.47 -0.5 17,171 + Ac3H11_661 0.47 +0.4 17,171 + Ac3H11_661 0.47 +2.2 17,171 + Ac3H11_661 0.47 +1.9 17,171 + Ac3H11_661 0.47 +2.9 17,172 - Ac3H11_661 0.47 +1.4 17,172 - Ac3H11_661 0.47 -2.1 17,172 - Ac3H11_661 0.47 -0.8 17,172 - Ac3H11_661 0.47 +0.3 17,172 - Ac3H11_661 0.47 -1.2 17,172 - Ac3H11_661 0.47 +0.1 17,423 + Ac3H11_661 0.63 -1.5 17,424 - Ac3H11_661 0.63 +1.8 17,424 - Ac3H11_661 0.63 -0.1 17,717 + Ac3H11_661 0.81 -0.4 17,718 - Ac3H11_661 0.81 -1.9 17,718 - Ac3H11_661 0.81 +2.0 17,777 + Ac3H11_661 0.85 -1.7 17,777 + Ac3H11_661 0.85 -0.2 17,777 + Ac3H11_661 0.85 +0.8 17,777 + Ac3H11_661 0.85 +1.6 17,777 + Ac3H11_661 0.85 -2.9 17,778 - Ac3H11_661 0.85 +0.2 17,778 - Ac3H11_661 0.85 -0.9 17,778 - Ac3H11_661 0.85 -0.7 17,778 - Ac3H11_661 0.85 +3.3 18,017 + +0.4 18,017 + +0.9 18,017 + +1.5 18,018 - -0.1 18,018 - -0.5 18,018 - +1.3 18,082 - +0.2 18,082 - -0.6 18,276 + Ac3H11_662 0.16 +2.4 18,276 + Ac3H11_662 0.16 -1.8 18,276 + Ac3H11_662 0.16 +0.6 18,276 + Ac3H11_662 0.16 +2.3 18,277 - Ac3H11_662 0.16 -1.9 18,277 - Ac3H11_662 0.16 -2.6 18,375 + Ac3H11_662 0.23 +2.6 18,376 - Ac3H11_662 0.23 +0.9 18,376 - Ac3H11_662 0.23 +1.5 18,376 - Ac3H11_662 0.23 +0.6 18,383 + Ac3H11_662 0.23 +1.0 18,435 + Ac3H11_662 0.27 +2.1 18,435 + Ac3H11_662 0.27 +1.9 18,435 + Ac3H11_662 0.27 +1.4 18,435 + Ac3H11_662 0.27 +1.5 18,436 - Ac3H11_662 0.27 +1.1 18,436 - Ac3H11_662 0.27 +0.9 18,729 + Ac3H11_662 0.48 -1.5 18,729 + Ac3H11_662 0.48 -1.7 18,729 + Ac3H11_662 0.48 -0.7 18,729 + Ac3H11_662 0.48 +0.3 18,730 - Ac3H11_662 0.48 +0.2 18,730 - Ac3H11_662 0.48 +0.9 18,730 - Ac3H11_662 0.48 +0.8 18,730 - Ac3H11_662 0.48 -1.4 18,730 - Ac3H11_662 0.48 -1.9 18,783 - Ac3H11_662 0.52 +2.2 18,828 + Ac3H11_662 0.55 +1.3 18,828 + Ac3H11_662 0.55 +1.2 18,828 + Ac3H11_662 0.55 +5.7 18,829 - Ac3H11_662 0.55 +0.5 18,829 - Ac3H11_662 0.55 +2.4 18,829 - Ac3H11_662 0.55 -3.0 18,829 - Ac3H11_662 0.55 +1.7 18,829 - Ac3H11_662 0.55 -0.8 18,829 - Ac3H11_662 0.55 -0.1 18,829 - Ac3H11_662 0.55 +4.6
Or see this region's nucleotide sequence