Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_202 and Ac3H11_203 are separated by 126 nucleotides Ac3H11_203 and Ac3H11_204 are separated by 150 nucleotides Ac3H11_204 and Ac3H11_205 overlap by 8 nucleotides Ac3H11_205 and Ac3H11_206 are separated by 99 nucleotides
Ac3H11_202 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 12,987 to 13,346
_202
Ac3H11_203 - Probable proline-rich protein, at 13,473 to 13,991
_203
Ac3H11_204 - Acetate permease ActP (cation/acetate symporter), at 14,142 to 16,241
_204
Ac3H11_205 - FIG152265: Sodium:solute symporter associated protein, at 16,234 to 16,533
_205
Ac3H11_206 - Phosphoenolpyruvate synthase (EC 2.7.9.2), at 16,633 to 19,023
_206
Position (kb) 14
15
16
17 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 13.642 kb on + strand, within Ac3H11_203 at 13.643 kb on - strand, within Ac3H11_203 at 13.643 kb on - strand, within Ac3H11_203 at 14.001 kb on - strand at 14.001 kb on - strand at 14.001 kb on - strand at 14.011 kb on + strand at 14.012 kb on - strand at 14.023 kb on + strand at 14.023 kb on + strand at 14.023 kb on + strand at 14.024 kb on - strand at 14.024 kb on - strand at 14.063 kb on + strand at 14.091 kb on - strand at 14.106 kb on + strand at 14.106 kb on + strand at 14.107 kb on - strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.116 kb on + strand at 14.116 kb on + strand at 14.116 kb on + strand at 14.116 kb on + strand at 14.117 kb on - strand at 14.143 kb on + strand at 14.144 kb on - strand at 14.144 kb on - strand at 14.144 kb on - strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.336 kb on - strand at 14.336 kb on - strand at 14.336 kb on - strand at 14.590 kb on + strand, within Ac3H11_204 at 14.591 kb on - strand, within Ac3H11_204 at 14.692 kb on + strand, within Ac3H11_204 at 14.692 kb on + strand, within Ac3H11_204 at 14.692 kb on + strand, within Ac3H11_204 at 14.693 kb on - strand, within Ac3H11_204 at 14.693 kb on - strand, within Ac3H11_204 at 14.693 kb on - strand, within Ac3H11_204 at 14.693 kb on - strand, within Ac3H11_204 at 14.693 kb on - strand, within Ac3H11_204 at 14.693 kb on - strand, within Ac3H11_204 at 14.921 kb on - strand, within Ac3H11_204 at 14.989 kb on + strand, within Ac3H11_204 at 14.989 kb on + strand, within Ac3H11_204 at 14.990 kb on - strand, within Ac3H11_204 at 14.990 kb on - strand, within Ac3H11_204 at 14.990 kb on - strand, within Ac3H11_204 at 15.076 kb on + strand, within Ac3H11_204 at 15.118 kb on + strand, within Ac3H11_204 at 15.118 kb on + strand, within Ac3H11_204 at 15.118 kb on + strand, within Ac3H11_204 at 15.118 kb on + strand, within Ac3H11_204 at 15.118 kb on + strand, within Ac3H11_204 at 15.119 kb on - strand, within Ac3H11_204 at 15.119 kb on - strand, within Ac3H11_204 at 15.119 kb on - strand, within Ac3H11_204 at 15.119 kb on - strand, within Ac3H11_204 at 15.166 kb on + strand, within Ac3H11_204 at 15.166 kb on + strand, within Ac3H11_204 at 15.167 kb on - strand, within Ac3H11_204 at 15.167 kb on - strand, within Ac3H11_204 at 15.167 kb on - strand, within Ac3H11_204 at 15.167 kb on - strand, within Ac3H11_204 at 15.379 kb on + strand, within Ac3H11_204 at 15.379 kb on + strand, within Ac3H11_204 at 15.379 kb on + strand, within Ac3H11_204 at 15.380 kb on - strand, within Ac3H11_204 at 15.460 kb on + strand, within Ac3H11_204 at 15.461 kb on - strand, within Ac3H11_204 at 15.461 kb on - strand, within Ac3H11_204 at 15.461 kb on - strand, within Ac3H11_204 at 15.461 kb on - strand, within Ac3H11_204 at 15.496 kb on + strand, within Ac3H11_204 at 15.496 kb on + strand, within Ac3H11_204 at 15.496 kb on + strand, within Ac3H11_204 at 15.496 kb on + strand, within Ac3H11_204 at 15.496 kb on + strand, within Ac3H11_204 at 15.496 kb on + strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.497 kb on - strand, within Ac3H11_204 at 15.544 kb on + strand, within Ac3H11_204 at 15.544 kb on + strand, within Ac3H11_204 at 15.545 kb on - strand, within Ac3H11_204 at 15.545 kb on - strand, within Ac3H11_204 at 15.545 kb on - strand, within Ac3H11_204 at 15.650 kb on + strand, within Ac3H11_204 at 15.651 kb on - strand, within Ac3H11_204 at 15.651 kb on - strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.679 kb on + strand, within Ac3H11_204 at 15.680 kb on - strand, within Ac3H11_204 at 15.680 kb on - strand, within Ac3H11_204 at 15.680 kb on - strand, within Ac3H11_204 at 15.697 kb on + strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.698 kb on - strand, within Ac3H11_204 at 15.787 kb on + strand, within Ac3H11_204 at 15.787 kb on + strand, within Ac3H11_204 at 15.787 kb on + strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.788 kb on - strand, within Ac3H11_204 at 15.862 kb on + strand, within Ac3H11_204 at 15.862 kb on + strand, within Ac3H11_204 at 15.863 kb on - strand, within Ac3H11_204 at 15.863 kb on - strand, within Ac3H11_204 at 15.910 kb on + strand, within Ac3H11_204 at 15.911 kb on - strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.979 kb on + strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 15.980 kb on - strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.009 kb on + strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.010 kb on - strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.012 kb on + strand, within Ac3H11_204 at 16.013 kb on - strand, within Ac3H11_204 at 16.040 kb on - strand at 16.040 kb on - strand at 16.040 kb on - strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.165 kb on + strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.166 kb on - strand at 16.199 kb on - strand at 16.199 kb on - strand at 16.328 kb on + strand, within Ac3H11_205 at 16.329 kb on - strand, within Ac3H11_205 at 16.329 kb on - strand, within Ac3H11_205 at 16.383 kb on - strand, within Ac3H11_205 at 16.433 kb on + strand, within Ac3H11_205 at 16.433 kb on + strand, within Ac3H11_205 at 16.433 kb on + strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.434 kb on - strand, within Ac3H11_205 at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.763 kb on + strand at 16.764 kb on - strand at 16.764 kb on - strand at 16.764 kb on - strand at 16.989 kb on + strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 16.990 kb on - strand, within Ac3H11_206 at 17.171 kb on + strand, within Ac3H11_206 at 17.171 kb on + strand, within Ac3H11_206 at 17.172 kb on - strand, within Ac3H11_206 at 17.222 kb on + strand, within Ac3H11_206
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 13,642 + Ac3H11_203 0.33 -0.6 13,643 - Ac3H11_203 0.33 +2.1 13,643 - Ac3H11_203 0.33 -2.3 14,001 - +0.0 14,001 - +1.1 14,001 - -0.1 14,011 + +0.8 14,012 - +1.9 14,023 + -1.1 14,023 + -1.5 14,023 + +0.6 14,024 - +0.3 14,024 - -0.5 14,063 + -2.4 14,091 - -0.6 14,106 + +0.3 14,106 + -1.9 14,107 - -1.8 14,112 + +2.3 14,112 + +0.9 14,112 + +0.3 14,112 + -3.2 14,112 + +0.2 14,112 + +1.7 14,112 + +1.1 14,112 + +1.1 14,113 - +0.9 14,113 - -1.6 14,113 - +0.1 14,113 - -1.2 14,113 - -0.8 14,113 - +1.3 14,116 + -0.9 14,116 + +2.1 14,116 + +1.5 14,116 + -1.0 14,117 - -0.1 14,143 + +1.8 14,144 - +0.5 14,144 - -2.7 14,144 - -0.1 14,332 + +0.1 14,332 + -0.1 14,332 + -1.7 14,332 + -0.8 14,332 + +0.7 14,332 + -0.7 14,332 + -3.1 14,332 + +1.0 14,332 + -0.3 14,332 + -1.0 14,332 + -3.1 14,332 + +2.4 14,332 + -1.0 14,332 + -2.8 14,332 + -0.3 14,333 - +1.3 14,333 - +1.0 14,333 - +0.2 14,333 - -1.4 14,333 - +0.6 14,333 - +1.3 14,333 - -0.8 14,333 - -0.5 14,333 - +2.1 14,333 - +0.8 14,333 - +2.0 14,333 - +0.2 14,333 - -2.4 14,333 - +0.6 14,333 - -2.7 14,333 - +0.2 14,333 - -2.0 14,335 + +1.1 14,335 + +0.9 14,335 + +1.1 14,335 + +0.9 14,335 + -1.6 14,335 + -1.6 14,335 + +1.7 14,336 - -1.2 14,336 - -1.8 14,336 - +0.7 14,590 + Ac3H11_204 0.21 -1.1 14,591 - Ac3H11_204 0.21 -0.5 14,692 + Ac3H11_204 0.26 +1.2 14,692 + Ac3H11_204 0.26 -2.1 14,692 + Ac3H11_204 0.26 +0.5 14,693 - Ac3H11_204 0.26 +0.0 14,693 - Ac3H11_204 0.26 -0.1 14,693 - Ac3H11_204 0.26 +2.4 14,693 - Ac3H11_204 0.26 +0.0 14,693 - Ac3H11_204 0.26 -2.0 14,693 - Ac3H11_204 0.26 -0.9 14,921 - Ac3H11_204 0.37 -2.9 14,989 + Ac3H11_204 0.40 +0.7 14,989 + Ac3H11_204 0.40 +1.7 14,990 - Ac3H11_204 0.40 -0.2 14,990 - Ac3H11_204 0.40 +1.3 14,990 - Ac3H11_204 0.40 +0.0 15,076 + Ac3H11_204 0.44 -0.8 15,118 + Ac3H11_204 0.46 -0.7 15,118 + Ac3H11_204 0.46 +0.9 15,118 + Ac3H11_204 0.46 +0.2 15,118 + Ac3H11_204 0.46 -0.9 15,118 + Ac3H11_204 0.46 -0.5 15,119 - Ac3H11_204 0.47 +2.2 15,119 - Ac3H11_204 0.47 -1.4 15,119 - Ac3H11_204 0.47 +1.3 15,119 - Ac3H11_204 0.47 -0.7 15,166 + Ac3H11_204 0.49 +1.5 15,166 + Ac3H11_204 0.49 +0.3 15,167 - Ac3H11_204 0.49 +1.1 15,167 - Ac3H11_204 0.49 -0.7 15,167 - Ac3H11_204 0.49 -1.2 15,167 - Ac3H11_204 0.49 -0.6 15,379 + Ac3H11_204 0.59 -0.6 15,379 + Ac3H11_204 0.59 -1.3 15,379 + Ac3H11_204 0.59 -0.2 15,380 - Ac3H11_204 0.59 +1.1 15,460 + Ac3H11_204 0.63 -0.9 15,461 - Ac3H11_204 0.63 +2.8 15,461 - Ac3H11_204 0.63 -0.3 15,461 - Ac3H11_204 0.63 +0.4 15,461 - Ac3H11_204 0.63 +0.9 15,496 + Ac3H11_204 0.64 +0.6 15,496 + Ac3H11_204 0.64 -0.5 15,496 + Ac3H11_204 0.64 +3.1 15,496 + Ac3H11_204 0.64 +2.9 15,496 + Ac3H11_204 0.64 +0.6 15,496 + Ac3H11_204 0.64 +2.9 15,497 - Ac3H11_204 0.65 -1.9 15,497 - Ac3H11_204 0.65 -0.8 15,497 - Ac3H11_204 0.65 +0.2 15,497 - Ac3H11_204 0.65 +2.1 15,497 - Ac3H11_204 0.65 -1.2 15,497 - Ac3H11_204 0.65 +1.8 15,497 - Ac3H11_204 0.65 -0.0 15,544 + Ac3H11_204 0.67 -1.4 15,544 + Ac3H11_204 0.67 +3.3 15,545 - Ac3H11_204 0.67 +1.0 15,545 - Ac3H11_204 0.67 +2.9 15,545 - Ac3H11_204 0.67 +0.1 15,650 + Ac3H11_204 0.72 +2.5 15,651 - Ac3H11_204 0.72 -1.9 15,651 - Ac3H11_204 0.72 +1.2 15,679 + Ac3H11_204 0.73 +0.7 15,679 + Ac3H11_204 0.73 -1.9 15,679 + Ac3H11_204 0.73 +2.1 15,679 + Ac3H11_204 0.73 +0.2 15,679 + Ac3H11_204 0.73 -1.9 15,680 - Ac3H11_204 0.73 -0.4 15,680 - Ac3H11_204 0.73 +1.3 15,680 - Ac3H11_204 0.73 +5.9 15,697 + Ac3H11_204 0.74 -2.0 15,698 - Ac3H11_204 0.74 +0.5 15,698 - Ac3H11_204 0.74 +1.5 15,698 - Ac3H11_204 0.74 +1.8 15,698 - Ac3H11_204 0.74 -0.6 15,698 - Ac3H11_204 0.74 -1.0 15,787 + Ac3H11_204 0.78 +0.6 15,787 + Ac3H11_204 0.78 -1.1 15,787 + Ac3H11_204 0.78 -0.6 15,788 - Ac3H11_204 0.78 +1.6 15,788 - Ac3H11_204 0.78 -1.6 15,788 - Ac3H11_204 0.78 -0.5 15,788 - Ac3H11_204 0.78 +0.0 15,788 - Ac3H11_204 0.78 +0.7 15,788 - Ac3H11_204 0.78 +0.2 15,862 + Ac3H11_204 0.82 +0.6 15,862 + Ac3H11_204 0.82 +0.6 15,863 - Ac3H11_204 0.82 -0.5 15,863 - Ac3H11_204 0.82 +1.9 15,910 + Ac3H11_204 0.84 +1.1 15,911 - Ac3H11_204 0.84 +0.5 15,979 + Ac3H11_204 0.87 -2.8 15,979 + Ac3H11_204 0.87 -2.1 15,979 + +1.8 15,979 + Ac3H11_204 0.87 +2.4 15,979 + Ac3H11_204 0.87 +0.2 15,979 + Ac3H11_204 0.87 -0.7 15,979 + Ac3H11_204 0.87 +1.4 15,979 + Ac3H11_204 0.87 +0.4 15,979 + Ac3H11_204 0.87 -1.1 15,980 - Ac3H11_204 0.88 -1.1 15,980 - Ac3H11_204 0.88 +1.5 15,980 - Ac3H11_204 0.88 -1.0 15,980 - Ac3H11_204 0.88 -2.3 15,980 - Ac3H11_204 0.88 -1.1 15,980 - Ac3H11_204 0.88 -1.2 15,980 - Ac3H11_204 0.88 +0.5 16,009 + Ac3H11_204 0.89 -1.3 16,009 + Ac3H11_204 0.89 -0.9 16,009 + Ac3H11_204 0.89 -0.8 16,009 + Ac3H11_204 0.89 +0.1 16,009 + Ac3H11_204 0.89 -0.0 16,009 + Ac3H11_204 0.89 +1.8 16,010 - Ac3H11_204 0.89 +0.5 16,010 - Ac3H11_204 0.89 -0.3 16,010 - Ac3H11_204 0.89 +0.5 16,010 - Ac3H11_204 0.89 -0.5 16,010 - Ac3H11_204 0.89 +1.4 16,010 - Ac3H11_204 0.89 +1.1 16,010 - Ac3H11_204 0.89 +2.0 16,010 - Ac3H11_204 0.89 +0.3 16,010 - Ac3H11_204 0.89 +0.5 16,010 - Ac3H11_204 0.89 -0.0 16,012 + Ac3H11_204 0.89 +0.9 16,012 + Ac3H11_204 0.89 +1.9 16,012 + Ac3H11_204 0.89 +1.5 16,012 + Ac3H11_204 0.89 -1.5 16,013 - Ac3H11_204 0.89 +1.3 16,040 - +0.4 16,040 - +0.6 16,040 - +0.4 16,165 + -1.6 16,165 + +1.8 16,165 + -1.2 16,165 + -1.1 16,165 + +2.8 16,165 + -0.2 16,165 + -3.2 16,166 - +0.1 16,166 - -1.2 16,166 - +0.5 16,166 - -0.4 16,166 - -0.2 16,166 - -0.9 16,199 - +0.4 16,199 - -0.4 16,328 + Ac3H11_205 0.31 +0.3 16,329 - Ac3H11_205 0.32 -0.9 16,329 - Ac3H11_205 0.32 -0.9 16,383 - Ac3H11_205 0.50 +3.0 16,433 + Ac3H11_205 0.66 -0.0 16,433 + Ac3H11_205 0.66 -1.6 16,433 + Ac3H11_205 0.66 -1.6 16,434 - Ac3H11_205 0.67 -0.6 16,434 - Ac3H11_205 0.67 +0.6 16,434 - Ac3H11_205 0.67 +1.3 16,434 - Ac3H11_205 0.67 -0.7 16,434 - Ac3H11_205 0.67 -1.6 16,434 - Ac3H11_205 0.67 -1.0 16,763 + -0.7 16,763 + -1.7 16,763 + -1.8 16,763 + -0.9 16,763 + -2.4 16,763 + -0.2 16,763 + -0.4 16,764 - -1.0 16,764 - -3.5 16,764 - +0.0 16,989 + Ac3H11_206 0.15 -1.2 16,990 - Ac3H11_206 0.15 -2.4 16,990 - Ac3H11_206 0.15 -0.4 16,990 - Ac3H11_206 0.15 -2.0 16,990 - Ac3H11_206 0.15 -0.9 17,171 + Ac3H11_206 0.23 -2.4 17,171 + Ac3H11_206 0.23 -2.8 17,172 - Ac3H11_206 0.23 -1.0 17,222 + Ac3H11_206 0.25 -1.2
Or see this region's nucleotide sequence