Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_200 and Ac3H11_201 are separated by 192 nucleotides Ac3H11_201 and Ac3H11_202 are separated by 128 nucleotides Ac3H11_202 and Ac3H11_203 are separated by 126 nucleotides Ac3H11_203 and Ac3H11_204 are separated by 150 nucleotides
Ac3H11_200 - Transcriptional regulator, at 11,443 to 12,357
_200
Ac3H11_201 - FIG00349048: hypothetical protein, at 12,550 to 12,858
_201
Ac3H11_202 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 12,987 to 13,346
_202
Ac3H11_203 - Probable proline-rich protein, at 13,473 to 13,991
_203
Ac3H11_204 - Acetate permease ActP (cation/acetate symporter), at 14,142 to 16,241
_204
Position (kb) 12
13
14 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 12.320 kb on - strand at 12.320 kb on - strand at 12.320 kb on - strand at 12.320 kb on - strand at 12.320 kb on - strand at 12.391 kb on + strand at 12.468 kb on + strand at 12.469 kb on - strand at 12.470 kb on + strand at 12.470 kb on + strand at 12.470 kb on + strand at 12.907 kb on + strand at 12.915 kb on + strand at 12.916 kb on - strand at 12.916 kb on - strand at 12.919 kb on + strand at 12.920 kb on - strand at 12.920 kb on - strand at 12.920 kb on - strand at 12.948 kb on - strand at 12.955 kb on - strand at 13.020 kb on + strand at 13.083 kb on + strand, within Ac3H11_202 at 13.083 kb on + strand, within Ac3H11_202 at 13.084 kb on - strand, within Ac3H11_202 at 13.084 kb on - strand, within Ac3H11_202 at 13.098 kb on + strand, within Ac3H11_202 at 13.098 kb on + strand, within Ac3H11_202 at 13.098 kb on + strand, within Ac3H11_202 at 13.098 kb on + strand, within Ac3H11_202 at 13.098 kb on + strand, within Ac3H11_202 at 13.642 kb on + strand, within Ac3H11_203 at 13.643 kb on - strand, within Ac3H11_203 at 13.643 kb on - strand, within Ac3H11_203 at 14.001 kb on - strand at 14.001 kb on - strand at 14.001 kb on - strand at 14.011 kb on + strand at 14.012 kb on - strand at 14.023 kb on + strand at 14.023 kb on + strand at 14.023 kb on + strand at 14.024 kb on - strand at 14.024 kb on - strand at 14.063 kb on + strand at 14.091 kb on - strand at 14.106 kb on + strand at 14.106 kb on + strand at 14.107 kb on - strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.112 kb on + strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.113 kb on - strand at 14.116 kb on + strand at 14.116 kb on + strand at 14.116 kb on + strand at 14.116 kb on + strand at 14.117 kb on - strand at 14.143 kb on + strand at 14.144 kb on - strand at 14.144 kb on - strand at 14.144 kb on - strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.332 kb on + strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.333 kb on - strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.335 kb on + strand at 14.336 kb on - strand at 14.336 kb on - strand at 14.336 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 12,320 - -1.9 12,320 - +0.3 12,320 - -0.8 12,320 - -0.4 12,320 - -2.8 12,391 + +1.7 12,468 + -2.2 12,469 - +0.2 12,470 + +0.4 12,470 + +0.5 12,470 + +0.9 12,907 + +3.2 12,915 + +0.4 12,916 - -1.2 12,916 - -1.8 12,919 + +0.5 12,920 - +0.5 12,920 - +0.6 12,920 - -0.2 12,948 - -0.7 12,955 - +1.6 13,020 + -0.8 13,083 + Ac3H11_202 0.27 +1.8 13,083 + Ac3H11_202 0.27 -0.9 13,084 - Ac3H11_202 0.27 -2.0 13,084 - Ac3H11_202 0.27 +1.7 13,098 + Ac3H11_202 0.31 -1.1 13,098 + Ac3H11_202 0.31 +1.0 13,098 + Ac3H11_202 0.31 +0.1 13,098 + Ac3H11_202 0.31 +2.9 13,098 + Ac3H11_202 0.31 +0.4 13,642 + Ac3H11_203 0.33 -0.6 13,643 - Ac3H11_203 0.33 +2.1 13,643 - Ac3H11_203 0.33 -2.3 14,001 - +0.0 14,001 - +1.1 14,001 - -0.1 14,011 + +0.8 14,012 - +1.9 14,023 + -1.1 14,023 + -1.5 14,023 + +0.6 14,024 - +0.3 14,024 - -0.5 14,063 + -2.4 14,091 - -0.6 14,106 + +0.3 14,106 + -1.9 14,107 - -1.8 14,112 + +2.3 14,112 + +0.9 14,112 + +0.3 14,112 + -3.2 14,112 + +0.2 14,112 + +1.7 14,112 + +1.1 14,112 + +1.1 14,113 - +0.9 14,113 - -1.6 14,113 - +0.1 14,113 - -1.2 14,113 - -0.8 14,113 - +1.3 14,116 + -0.9 14,116 + +2.1 14,116 + +1.5 14,116 + -1.0 14,117 - -0.1 14,143 + +1.8 14,144 - +0.5 14,144 - -2.7 14,144 - -0.1 14,332 + +0.1 14,332 + -0.1 14,332 + -1.7 14,332 + -0.8 14,332 + +0.7 14,332 + -0.7 14,332 + -3.1 14,332 + +1.0 14,332 + -0.3 14,332 + -1.0 14,332 + -3.1 14,332 + +2.4 14,332 + -1.0 14,332 + -2.8 14,332 + -0.3 14,333 - +1.3 14,333 - +1.0 14,333 - +0.2 14,333 - -1.4 14,333 - +0.6 14,333 - +1.3 14,333 - -0.8 14,333 - -0.5 14,333 - +2.1 14,333 - +0.8 14,333 - +2.0 14,333 - +0.2 14,333 - -2.4 14,333 - +0.6 14,333 - -2.7 14,333 - +0.2 14,333 - -2.0 14,335 + +1.1 14,335 + +0.9 14,335 + +1.1 14,335 + +0.9 14,335 + -1.6 14,335 + -1.6 14,335 + +1.7 14,336 - -1.2 14,336 - -1.8 14,336 - +0.7
Or see this region's nucleotide sequence