Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2338

Experiment: Rifampicin 0.0001953125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0001953125 mg/ml
2,404,899	-		Synpcc7942_2337	0.32	-0.1
2,404,954	-		Synpcc7942_2337	0.37	-1.1
2,404,985	+		Synpcc7942_2337	0.41	+0.1
2,404,988	-		Synpcc7942_2337	0.41	-2.1
2,404,999	-		Synpcc7942_2337	0.42	-0.3
2,405,034	+		Synpcc7942_2337	0.46	+0.9
2,405,042	-		Synpcc7942_2337	0.47	-0.1
2,405,047	+		Synpcc7942_2337	0.47	-1.1
2,405,048	+		Synpcc7942_2337	0.47	+2.0
2,405,050	-		Synpcc7942_2337	0.47	-0.7
2,405,075	-		Synpcc7942_2337	0.50	-0.1
2,405,086	+		Synpcc7942_2337	0.51	-0.5
2,405,094	-		Synpcc7942_2337	0.52	+2.1
2,405,094	-		Synpcc7942_2337	0.52	+0.5
2,405,114	+		Synpcc7942_2337	0.54	-0.4
2,405,122	-		Synpcc7942_2337	0.55	+1.8
2,405,154	-		Synpcc7942_2337	0.58	+0.1
2,405,225	+		Synpcc7942_2337	0.66	-3.1
2,405,242	+		Synpcc7942_2337	0.68	+1.8
2,405,348	+		Synpcc7942_2337	0.79	+1.5
2,405,356	-		Synpcc7942_2337	0.80	-0.1
2,405,425	-		Synpcc7942_2337	0.87	+1.1
2,405,437	+		Synpcc7942_2337	0.88	+0.3
2,405,437	+		Synpcc7942_2337	0.88	-0.9
2,405,437	+		Synpcc7942_2337	0.88	-0.7
2,405,445	-		Synpcc7942_2337	0.89	+0.9
2,405,445	-		Synpcc7942_2337	0.89	+1.8
2,405,445	-		Synpcc7942_2337	0.89	+0.5
2,405,455	-				-2.4
2,405,464	-				+3.3
2,405,491	-				+1.1
2,405,493	+				+1.5
2,405,516	+				+0.1
2,405,524	-				-1.4
2,405,546	+				+0.9
2,405,596	+				-0.3
2,405,624	+				-0.1
2,405,669	+				+0.9
2,405,682	+				+0.8
2,405,694	-				-3.9
2,405,699	-				-2.1
2,405,715	+				-0.1
2,405,759	-				+1.3
2,405,764	-				-1.1
2,405,777	-				-0.3
2,405,791	-				-0.5
2,405,799	+				-0.5
2,405,812	-				-0.7
2,405,817	-				-0.2
2,405,845	+				-2.7
2,405,845	+				+0.8
2,405,853	+				-1.8
2,405,853	+				-3.6
2,405,853	-				+0.2
2,405,893	-				+0.9
2,405,898	-				+0.1
2,405,966	+		Synpcc7942_2338	0.13	-3.1
2,405,970	+		Synpcc7942_2338	0.13	-5.2
2,405,980	+		Synpcc7942_2338	0.14	+1.3
2,405,982	+		Synpcc7942_2338	0.14	-4.7
2,405,982	+		Synpcc7942_2338	0.14	-2.4
2,405,982	+		Synpcc7942_2338	0.14	-3.4
2,405,990	-		Synpcc7942_2338	0.15	-1.2
2,405,990	-		Synpcc7942_2338	0.15	-1.2
2,405,990	-		Synpcc7942_2338	0.15	-2.1
2,405,991	+		Synpcc7942_2338	0.15	-1.0
2,405,992	+		Synpcc7942_2338	0.16	-2.9
2,405,992	+		Synpcc7942_2338	0.16	+1.8
2,406,013	+		Synpcc7942_2338	0.18	-1.7
2,406,013	+		Synpcc7942_2338	0.18	-0.3
2,406,021	-		Synpcc7942_2338	0.19	-1.0
2,406,021	-		Synpcc7942_2338	0.19	-1.9
2,406,021	-		Synpcc7942_2338	0.19	-0.1
2,406,021	-		Synpcc7942_2338	0.19	-2.9
2,406,021	-		Synpcc7942_2338	0.19	-1.0
2,406,029	+		Synpcc7942_2338	0.20	-2.4
2,406,067	+		Synpcc7942_2338	0.24	-3.1
2,406,127	+		Synpcc7942_2338	0.30	-3.0
2,406,148	+		Synpcc7942_2338	0.33	-1.1
2,406,165	+		Synpcc7942_2338	0.34	-3.7
2,406,194	+		Synpcc7942_2338	0.38	-1.3
2,406,200	-		Synpcc7942_2338	0.38	-3.4
2,406,202	-		Synpcc7942_2338	0.38	-1.7
2,406,205	+		Synpcc7942_2338	0.39	-0.7
2,406,253	+		Synpcc7942_2338	0.44	-1.7
2,406,290	+		Synpcc7942_2338	0.48	-2.7
2,406,296	-		Synpcc7942_2338	0.49	-0.7
2,406,344	+		Synpcc7942_2338	0.54	-1.7
2,406,436	-		Synpcc7942_2338	0.64	-2.7
2,406,495	+		Synpcc7942_2338	0.70	-1.7
2,406,503	-		Synpcc7942_2338	0.71	-2.7
2,406,511	+		Synpcc7942_2338	0.72	-0.5
2,406,513	-		Synpcc7942_2338	0.72	-2.4
2,406,519	-		Synpcc7942_2338	0.73	-0.9
2,406,519	-		Synpcc7942_2338	0.73	-1.1
2,406,536	-		Synpcc7942_2338	0.75	-3.1
2,406,584	+		Synpcc7942_2338	0.80	+0.3
2,406,584	+		Synpcc7942_2338	0.80	-3.1
2,406,592	-		Synpcc7942_2338	0.81	+2.5
2,406,592	-		Synpcc7942_2338	0.81	-3.0
2,406,592	-		Synpcc7942_2338	0.81	-2.4
2,406,592	-		Synpcc7942_2338	0.81	-2.4
2,406,592	-		Synpcc7942_2338	0.81	-3.8
2,406,593	-		Synpcc7942_2338	0.81	-3.4
2,406,593	-		Synpcc7942_2338	0.81	-0.1
2,406,624	-		Synpcc7942_2338	0.84	-1.7
2,406,629	-		Synpcc7942_2338	0.85	-2.4
2,406,629	-		Synpcc7942_2338	0.85	-1.7
2,406,640	+		Synpcc7942_2338	0.86	-2.9
2,406,664	+		Synpcc7942_2338	0.89	-0.7
2,406,672	-		Synpcc7942_2338	0.90	-0.8
2,406,678	+				-1.1
2,406,697	-				-2.6
2,406,733	+				+0.5
2,406,741	-				+0.3