Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2067

Experiment: Rifampicin 0.0001953125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0001953125 mg/ml
2,142,368	-				-3.2
2,142,376	+				-0.1
2,142,376	+				+2.6
2,142,376	+				-0.3
2,142,384	-		Synpcc7942_2066	0.10	+0.5
2,142,412	+		Synpcc7942_2066	0.13	-0.6
2,142,429	-		Synpcc7942_2066	0.15	+2.3
2,142,430	-		Synpcc7942_2066	0.15	+0.2
2,142,460	+		Synpcc7942_2066	0.18	-0.6
2,142,466	-		Synpcc7942_2066	0.18	-1.1
2,142,476	+		Synpcc7942_2066	0.19	+0.2
2,142,484	-		Synpcc7942_2066	0.20	+1.1
2,142,524	+		Synpcc7942_2066	0.24	+0.1
2,142,530	+		Synpcc7942_2066	0.24	-0.7
2,142,532	-		Synpcc7942_2066	0.25	+0.8
2,142,538	+		Synpcc7942_2066	0.25	+2.6
2,142,538	+		Synpcc7942_2066	0.25	-1.5
2,142,538	+		Synpcc7942_2066	0.25	-2.6
2,142,607	+		Synpcc7942_2066	0.32	+1.1
2,142,625	-		Synpcc7942_2066	0.34	+3.2
2,142,634	+		Synpcc7942_2066	0.34	-0.9
2,142,642	-		Synpcc7942_2066	0.35	+1.9
2,142,750	+		Synpcc7942_2066	0.46	+1.1
2,142,770	-		Synpcc7942_2066	0.48	+3.3
2,142,785	-		Synpcc7942_2066	0.49	+0.4
2,142,794	+				-1.1
2,142,809	+		Synpcc7942_2066	0.51	-0.9
2,142,836	-		Synpcc7942_2066	0.54	+0.7
2,142,836	-		Synpcc7942_2066	0.54	+0.2
2,142,836	-		Synpcc7942_2066	0.54	-2.6
2,142,883	+		Synpcc7942_2066	0.59	-1.1
2,142,914	+		Synpcc7942_2066	0.62	+1.7
2,142,914	+		Synpcc7942_2066	0.62	-0.9
2,142,914	+		Synpcc7942_2066	0.62	+1.7
2,142,914	+		Synpcc7942_2066	0.62	+0.2
2,142,922	-		Synpcc7942_2066	0.62	-0.5
2,142,922	-		Synpcc7942_2066	0.62	-0.1
2,142,922	-		Synpcc7942_2066	0.62	+0.5
2,142,922	-		Synpcc7942_2066	0.62	-0.3
2,142,922	-		Synpcc7942_2066	0.62	+0.9
2,142,922	-				+2.5
2,142,922	-		Synpcc7942_2066	0.62	-3.5
2,142,922	-		Synpcc7942_2066	0.62	+2.5
2,142,922	-		Synpcc7942_2066	0.62	+0.5
2,142,922	-		Synpcc7942_2066	0.62	+0.1
2,142,922	-		Synpcc7942_2066	0.62	+2.4
2,142,922	-		Synpcc7942_2066	0.62	+0.3
2,142,922	-		Synpcc7942_2066	0.62	+3.1
2,142,924	-		Synpcc7942_2066	0.62	+1.8
2,142,934	-		Synpcc7942_2066	0.63	-2.1
2,142,935	+		Synpcc7942_2066	0.64	+1.1
2,142,948	+		Synpcc7942_2066	0.65	-0.9
2,142,958	+		Synpcc7942_2066	0.66	-2.1
2,143,029	+		Synpcc7942_2066	0.73	+0.9
2,143,031	-		Synpcc7942_2066	0.73	+0.5
2,143,059	+		Synpcc7942_2066	0.76	+0.9
2,143,060	-		Synpcc7942_2066	0.76	-1.6
2,143,067	-		Synpcc7942_2066	0.76	+2.5
2,143,068	-		Synpcc7942_2066	0.76	-0.0
2,143,106	-		Synpcc7942_2066	0.80	-0.9
2,143,109	-		Synpcc7942_2066	0.80	+0.1
2,143,163	-		Synpcc7942_2066	0.86	+2.3
2,143,171	+		Synpcc7942_2066	0.86	+1.8
2,143,184	-		Synpcc7942_2066	0.88	+0.9
2,143,184	-		Synpcc7942_2066	0.88	+0.6
2,143,256	+				-1.4
2,143,264	+				-0.4
2,143,264	-				+1.2
2,143,277	-				+1.5
2,143,277	-				+2.1
2,143,277	-				+3.5
2,143,277	-				-1.9
2,143,277	-				+0.0
2,143,277	-				-1.5
2,143,279	-				+0.8
2,143,292	+				+2.1
2,143,301	+				-0.1
2,143,301	+				-0.1
2,143,322	+				+1.5
2,143,325	+				+1.0
2,143,326	+				-0.6
2,143,331	-				-1.2
2,143,333	-				-1.1
2,143,343	-				+2.3
2,143,347	+				-0.1
2,143,404	+				+0.3
2,143,404	+				+1.9
2,143,412	-				-1.1
2,143,414	-				+0.8
2,143,429	+				+0.6
2,143,429	+				+1.4
2,143,437	-				-1.6
2,143,438	+				-0.6
2,143,446	-				+1.8
2,143,457	-				+1.6
2,143,500	-		Synpcc7942_2067	0.13	+0.6
2,143,507	+		Synpcc7942_2067	0.14	-2.9
2,143,507	+		Synpcc7942_2067	0.14	-0.8
2,143,515	-		Synpcc7942_2067	0.14	-1.3
2,143,515	-		Synpcc7942_2067	0.14	+1.8
2,143,526	-		Synpcc7942_2067	0.15	+1.3
2,143,539	-		Synpcc7942_2067	0.16	+3.1
2,143,562	+		Synpcc7942_2067	0.18	-0.6
2,143,581	+		Synpcc7942_2067	0.20	-2.4
2,143,609	+		Synpcc7942_2067	0.22	-2.6
2,143,631	-		Synpcc7942_2067	0.24	-1.1
2,143,706	-		Synpcc7942_2067	0.30	-2.9
2,143,730	-		Synpcc7942_2067	0.31	+1.1
2,143,745	-		Synpcc7942_2067	0.33	-3.1
2,143,776	+		Synpcc7942_2067	0.35	+0.7
2,143,776	+		Synpcc7942_2067	0.35	+1.2
2,143,811	+		Synpcc7942_2067	0.38	-0.1
2,143,875	+		Synpcc7942_2067	0.43	+0.6
2,143,875	+		Synpcc7942_2067	0.43	-2.1
2,143,883	-		Synpcc7942_2067	0.44	-0.1
2,143,883	-		Synpcc7942_2067	0.44	-3.1
2,143,911	+		Synpcc7942_2067	0.46	-2.2
2,143,911	+		Synpcc7942_2067	0.46	-0.2
2,143,911	+		Synpcc7942_2067	0.46	-1.6
2,143,911	+		Synpcc7942_2067	0.46	+1.9
2,143,914	-		Synpcc7942_2067	0.46	-0.5
2,143,919	-		Synpcc7942_2067	0.47	-0.6
2,143,924	+		Synpcc7942_2067	0.47	+1.3
2,143,953	-		Synpcc7942_2067	0.49	+0.7
2,143,953	-		Synpcc7942_2067	0.49	+4.1
2,143,966	+		Synpcc7942_2067	0.50	+1.4
2,143,979	-		Synpcc7942_2067	0.51	+0.3
2,143,987	-		Synpcc7942_2067	0.52	-1.1
2,144,002	+		Synpcc7942_2067	0.53	+0.5
2,144,018	+		Synpcc7942_2067	0.55	+0.6
2,144,046	+		Synpcc7942_2067	0.57	-0.6
2,144,054	+		Synpcc7942_2067	0.57	+2.7
2,144,054	-		Synpcc7942_2067	0.57	-1.4
2,144,054	-		Synpcc7942_2067	0.57	+0.5
2,144,054	-		Synpcc7942_2067	0.57	-1.6
2,144,054	-		Synpcc7942_2067	0.57	-2.6
2,144,076	+		Synpcc7942_2067	0.59	-0.9
2,144,076	+		Synpcc7942_2067	0.59	+1.4
2,144,084	-		Synpcc7942_2067	0.60	+0.1
2,144,101	+		Synpcc7942_2067	0.61	-1.4
2,144,101	+		Synpcc7942_2067	0.61	-0.1
2,144,106	+		Synpcc7942_2067	0.62	+0.4
2,144,106	+				-1.1
2,144,132	+		Synpcc7942_2067	0.64	-1.1
2,144,164	+		Synpcc7942_2067	0.66	-0.3
2,144,171	+		Synpcc7942_2067	0.67	+0.8
2,144,172	-		Synpcc7942_2067	0.67	+0.3
2,144,208	-		Synpcc7942_2067	0.70	-2.6
2,144,223	+		Synpcc7942_2067	0.71	-2.6
2,144,244	-		Synpcc7942_2067	0.73	+0.7
2,144,257	-		Synpcc7942_2067	0.74	+0.9
2,144,260	+		Synpcc7942_2067	0.74	+1.3
2,144,316	-		Synpcc7942_2067	0.78	-2.1
2,144,323	-		Synpcc7942_2067	0.79	+0.6
2,144,326	-		Synpcc7942_2067	0.79	+1.1
2,144,402	+		Synpcc7942_2067	0.85	-1.7
2,144,402	+		Synpcc7942_2067	0.85	+0.9
2,144,413	+		Synpcc7942_2067	0.86	-0.6
2,144,421	-		Synpcc7942_2067	0.87	-0.0
2,144,435	+		Synpcc7942_2067	0.88	-0.1
2,144,453	-		Synpcc7942_2067	0.89	-0.0
2,144,455	-		Synpcc7942_2067	0.90	-0.9
2,144,462	-				-1.0
2,144,473	+				+1.3
2,144,523	-				+0.4
2,144,555	+				+0.4
2,144,570	-				-1.6
2,144,577	-				+0.2
2,144,584	+				-0.0
2,144,584	+				+0.3
2,144,592	-				+0.7
2,144,604	-				-0.5
2,144,616	+				-0.0
2,144,621	+		Synpcc7942_2068	0.13	-2.9
2,144,627	-		Synpcc7942_2068	0.14	-0.5
2,144,629	-		Synpcc7942_2068	0.14	+2.2
2,144,629	-		Synpcc7942_2068	0.14	-0.0
2,144,629	-		Synpcc7942_2068	0.14	-2.9
2,144,641	+		Synpcc7942_2068	0.17	+0.3
2,144,666	+		Synpcc7942_2068	0.21	-0.9
2,144,704	-		Synpcc7942_2068	0.28	-1.4
2,144,728	-		Synpcc7942_2068	0.32	+1.5
2,144,729	-		Synpcc7942_2068	0.32	-2.4
2,144,741	-		Synpcc7942_2068	0.35	+0.1
2,144,743	+		Synpcc7942_2068	0.35	+0.4
2,144,746	-				-1.0
2,144,748	+		Synpcc7942_2068	0.36	+2.0
2,144,751	-		Synpcc7942_2068	0.36	+0.4
2,144,753	+		Synpcc7942_2068	0.37	-3.4
2,144,756	-		Synpcc7942_2068	0.37	-0.0
2,144,761	-		Synpcc7942_2068	0.38	+0.5
2,144,767	-		Synpcc7942_2068	0.39	-2.6
2,144,782	+		Synpcc7942_2068	0.42	-1.0
2,144,859	-		Synpcc7942_2068	0.56	+0.1
2,144,897	+		Synpcc7942_2068	0.63	-0.0
2,144,907	-		Synpcc7942_2068	0.65	-1.3
2,144,929	+		Synpcc7942_2068	0.68	+0.8
2,144,940	+		Synpcc7942_2068	0.70	-1.0
2,144,968	-		Synpcc7942_2068	0.75	-2.0
2,144,974	-		Synpcc7942_2068	0.77	+1.0
2,144,999	+		Synpcc7942_2068	0.81	+0.5
2,144,999	+		Synpcc7942_2068	0.81	+1.5
2,145,007	+		Synpcc7942_2068	0.83	-0.0
2,145,007	+		Synpcc7942_2068	0.83	-0.4
2,145,012	+		Synpcc7942_2068	0.83	+0.2
2,145,012	+		Synpcc7942_2068	0.83	+3.2
2,145,012	+		Synpcc7942_2068	0.83	-0.6
2,145,015	-		Synpcc7942_2068	0.84	-1.0
2,145,069	+				-0.0
2,145,069	+				+2.3
2,145,077	-				-0.7
2,145,077	-				+0.4
2,145,088	+				+1.0
2,145,096	-				+0.6
2,145,101	-				-0.8
2,145,113	+				-2.6
2,145,113	+				-1.9
2,145,114	+				-1.9
2,145,121	-				-0.7
2,145,121	-				-0.6
2,145,192	-				-3.7
2,145,197	-				-1.9
2,145,347	+	pilC	Synpcc7942_2069	0.19	-2.4
2,145,357	+	pilC	Synpcc7942_2069	0.20	-1.2
2,145,357	+	pilC	Synpcc7942_2069	0.20	-2.2
2,145,375	-	pilC	Synpcc7942_2069	0.22	-2.4
2,145,380	+	pilC	Synpcc7942_2069	0.22	-2.1
2,145,380	+	pilC	Synpcc7942_2069	0.22	-2.4
2,145,390	-	pilC	Synpcc7942_2069	0.23	-3.2
2,145,391	+	pilC	Synpcc7942_2069	0.23	-2.4
2,145,461	+	pilC	Synpcc7942_2069	0.29	-2.8
2,145,461	+	pilC	Synpcc7942_2069	0.29	-3.5
2,145,469	-	pilC	Synpcc7942_2069	0.29	-2.4
2,145,482	+	pilC	Synpcc7942_2069	0.30	-2.1
2,145,492	+	pilC	Synpcc7942_2069	0.31	-2.4
2,145,561	+	pilC	Synpcc7942_2069	0.37	-1.9
2,145,561	+	pilC	Synpcc7942_2069	0.37	-3.4
2,145,561	+	pilC	Synpcc7942_2069	0.37	-3.1
2,145,569	-	pilC	Synpcc7942_2069	0.37	-2.5
2,145,575	+	pilC	Synpcc7942_2069	0.38	-2.6