Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1249

Experiment: Rifampicin 0.0001953125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0001953125 mg/ml
1,272,622	+		Synpcc7942_1248	0.12	+0.9
1,272,622	+		Synpcc7942_1248	0.12	-0.5
1,272,627	+		Synpcc7942_1248	0.13	-0.7
1,272,635	-		Synpcc7942_1248	0.15	+0.4
1,272,717	+		Synpcc7942_1248	0.29	+1.1
1,272,722	+		Synpcc7942_1248	0.30	-0.1
1,272,725	-		Synpcc7942_1248	0.30	+0.3
1,272,730	-		Synpcc7942_1248	0.31	-0.4
1,272,732	+		Synpcc7942_1248	0.32	-2.9
1,272,735	-		Synpcc7942_1248	0.32	-1.9
1,272,741	+		Synpcc7942_1248	0.33	-0.4
1,272,762	+		Synpcc7942_1248	0.37	-3.4
1,272,762	+		Synpcc7942_1248	0.37	+1.1
1,272,770	-		Synpcc7942_1248	0.38	-0.8
1,272,786	+		Synpcc7942_1248	0.41	+0.3
1,272,794	-		Synpcc7942_1248	0.42	-1.1
1,272,806	-		Synpcc7942_1248	0.45	+0.8
1,272,846	+		Synpcc7942_1248	0.51	+0.8
1,272,859	+		Synpcc7942_1248	0.54	+0.9
1,272,864	+		Synpcc7942_1248	0.55	-1.0
1,272,864	+		Synpcc7942_1248	0.55	-0.9
1,272,864	+		Synpcc7942_1248	0.55	-2.9
1,272,874	+		Synpcc7942_1248	0.56	-1.3
1,272,882	-		Synpcc7942_1248	0.58	+0.2
1,272,886	-		Synpcc7942_1248	0.58	+0.9
1,272,908	+				+1.2
1,272,908	+		Synpcc7942_1248	0.62	-1.6
1,272,908	+		Synpcc7942_1248	0.62	+0.5
1,272,908	+		Synpcc7942_1248	0.62	+1.9
1,272,915	-		Synpcc7942_1248	0.64	-0.7
1,272,916	-		Synpcc7942_1248	0.64	-0.5
1,272,916	-		Synpcc7942_1248	0.64	+0.9
1,273,016	-		Synpcc7942_1248	0.81	+1.4
1,273,017	-		Synpcc7942_1248	0.81	-0.7
1,273,041	+		Synpcc7942_1248	0.86	-1.7
1,273,078	+				+2.5
1,273,101	+				-3.1
1,273,101	+				-0.0
1,273,146	+				-1.1
1,273,229	+				-0.5
1,273,229	+				-1.1
1,273,237	-				-1.1
1,273,237	-				-2.4
1,273,237	-				-0.5
1,273,273	-				-1.7
1,273,286	-				+1.1
1,273,295	+				-0.1
1,273,334	+				+0.8
1,273,418	-				+1.8
1,273,469	+				-0.3
1,273,587	-				+2.9
1,273,962	-	psaF	Synpcc7942_1250	0.38	-1.7
1,274,169	-	psaF	Synpcc7942_1250	0.81	+0.5
1,274,193	+	psaF	Synpcc7942_1250	0.86	-3.4
1,274,218	+				-1.7
1,274,271	+				-1.7
1,274,285	+				-2.9
1,274,285	+				-1.4
1,274,293	-				-0.5