Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0117

Experiment: Rifampicin 0.0001953125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.0001953125 mg/ml
114,391	+				+0.2
114,393	-				+0.9
114,399	-	cscK	Synpcc7942_0116	0.10	-0.4
114,450	-	cscK	Synpcc7942_0116	0.15	+0.6
114,477	-	cscK	Synpcc7942_0116	0.18	-0.0
114,491	-	cscK	Synpcc7942_0116	0.20	+0.0
114,491	-	cscK	Synpcc7942_0116	0.20	-2.1
114,491	-	cscK	Synpcc7942_0116	0.20	-1.1
114,518	+	cscK	Synpcc7942_0116	0.22	+0.7
114,518	+	cscK	Synpcc7942_0116	0.22	+1.2
114,538	-	cscK	Synpcc7942_0116	0.25	-0.8
114,548	+	cscK	Synpcc7942_0116	0.26	+0.5
114,548	+	cscK	Synpcc7942_0116	0.26	+0.2
114,556	-	cscK	Synpcc7942_0116	0.26	-0.4
114,580	+	cscK	Synpcc7942_0116	0.29	+1.8
114,588	-	cscK	Synpcc7942_0116	0.30	-0.1
114,605	+	cscK	Synpcc7942_0116	0.31	-3.4
114,624	+	cscK	Synpcc7942_0116	0.33	-1.1
114,715	+	cscK	Synpcc7942_0116	0.43	+0.2
114,717	+	cscK	Synpcc7942_0116	0.43	-0.3
114,725	-	cscK	Synpcc7942_0116	0.44	+0.2
114,745	-	cscK	Synpcc7942_0116	0.46	+2.6
114,750	-	cscK	Synpcc7942_0116	0.46	-1.1
114,750	-	cscK	Synpcc7942_0116	0.46	-2.9
114,801	-	cscK	Synpcc7942_0116	0.51	+0.6
114,803	-	cscK	Synpcc7942_0116	0.52	-1.7
114,812	+	cscK	Synpcc7942_0116	0.53	-0.1
115,021	-	cscK	Synpcc7942_0116	0.74	+2.1
115,124	+	cscK	Synpcc7942_0116	0.85	+0.5
115,146	+	cscK	Synpcc7942_0116	0.87	+0.3
115,172	+	cscK	Synpcc7942_0116	0.90	-1.7
116,040	+		Synpcc7942_0117	0.49	+1.6
116,268	-		Synpcc7942_0117	0.66	-0.3
116,279	-		Synpcc7942_0117	0.67	+0.8
116,280	-		Synpcc7942_0117	0.67	+0.4
116,439	-		Synpcc7942_0117	0.79	+0.4
116,520	+		Synpcc7942_0117	0.85	-0.1
116,576	-		Synpcc7942_0117	0.89	+0.7
116,685	+				-2.1
116,688	+				+0.7
116,770	+				-0.2
116,770	+				+1.0
116,770	+				+0.1
116,770	+				-0.0
116,770	+				+2.7
116,770	+				+0.4
116,778	-				+0.5
116,778	-				+0.0
116,778	-				-1.1
116,778	-				+0.9
116,778	-				-0.2
116,824	-				+0.8
116,897	+				-0.1
116,897	+				-0.4
116,902	+				+0.6
116,905	-				-3.4
116,905	-				-0.0
116,910	-				-0.8