Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_917

Experiment: D-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (N)
1,041,472	+		Pf1N1B4_916	0.33	-0.9
1,041,472	+		Pf1N1B4_916	0.33	+0.1
1,041,472	+		Pf1N1B4_916	0.33	-0.3
1,041,472	+		Pf1N1B4_916	0.33	+0.1
1,041,473	-		Pf1N1B4_916	0.33	-1.3
1,041,809	+		Pf1N1B4_916	0.63	-0.9
1,041,900	+		Pf1N1B4_916	0.71	+0.1
1,041,900	+		Pf1N1B4_916	0.71	-1.2
1,041,901	-		Pf1N1B4_916	0.71	-1.7
1,041,901	-		Pf1N1B4_916	0.71	-0.9
1,041,901	-		Pf1N1B4_916	0.71	+0.1
1,041,904	+		Pf1N1B4_916	0.71	+1.1
1,041,904	+				+1.1
1,041,904	+		Pf1N1B4_916	0.71	-1.7
1,041,904	+		Pf1N1B4_916	0.71	+0.7
1,041,904	+		Pf1N1B4_916	0.71	-0.3
1,041,904	+		Pf1N1B4_916	0.71	-0.5
1,041,904	+		Pf1N1B4_916	0.71	+0.7
1,041,904	+		Pf1N1B4_916	0.71	-1.3
1,041,904	+		Pf1N1B4_916	0.71	+0.1
1,041,904	+		Pf1N1B4_916	0.71	+0.1
1,041,904	+		Pf1N1B4_916	0.71	+0.1
1,041,904	+		Pf1N1B4_916	0.71	+0.7
1,041,904	+		Pf1N1B4_916	0.71	-0.9
1,041,904	+		Pf1N1B4_916	0.71	-1.7
1,041,904	+				+2.4
1,041,904	+		Pf1N1B4_916	0.71	-0.9
1,041,904	+		Pf1N1B4_916	0.71	+2.4
1,041,904	+		Pf1N1B4_916	0.71	-1.9
1,041,904	+		Pf1N1B4_916	0.71	+0.1
1,041,905	-		Pf1N1B4_916	0.71	-1.5
1,041,905	-		Pf1N1B4_916	0.71	-0.3
1,041,905	-		Pf1N1B4_916	0.71	-0.3
1,041,905	-		Pf1N1B4_916	0.71	-0.8
1,041,905	-		Pf1N1B4_916	0.71	+1.4
1,041,905	-		Pf1N1B4_916	0.71	-0.5
1,041,905	-		Pf1N1B4_916	0.71	-1.3
1,041,905	-		Pf1N1B4_916	0.71	+0.1
1,041,905	-		Pf1N1B4_916	0.71	+0.1
1,041,905	-		Pf1N1B4_916	0.71	-0.9
1,041,905	-		Pf1N1B4_916	0.71	-2.5
1,041,905	-		Pf1N1B4_916	0.71	+0.1
1,041,905	-		Pf1N1B4_916	0.71	-0.9
1,041,905	-		Pf1N1B4_916	0.71	-0.5
1,041,905	-		Pf1N1B4_916	0.71	-0.7
1,041,905	-		Pf1N1B4_916	0.71	-0.6
1,041,905	-		Pf1N1B4_916	0.71	-1.5
1,041,905	-		Pf1N1B4_916	0.71	-0.9
1,042,045	+		Pf1N1B4_916	0.84	-1.0
1,042,045	+		Pf1N1B4_916	0.84	-1.2
1,042,045	+				+1.1
1,042,045	+		Pf1N1B4_916	0.84	-0.3
1,042,045	+		Pf1N1B4_916	0.84	-1.9
1,042,045	+		Pf1N1B4_916	0.84	-1.5
1,042,045	+		Pf1N1B4_916	0.84	+0.1
1,042,045	+		Pf1N1B4_916	0.84	-0.7
1,042,045	+		Pf1N1B4_916	0.84	-0.9
1,042,045	+		Pf1N1B4_916	0.84	-0.3
1,042,045	+		Pf1N1B4_916	0.84	-0.7
1,042,045	+		Pf1N1B4_916	0.84	+0.1
1,042,045	+		Pf1N1B4_916	0.84	+0.1
1,042,045	+		Pf1N1B4_916	0.84	-1.5
1,042,046	-		Pf1N1B4_916	0.84	-0.9
1,042,046	-		Pf1N1B4_916	0.84	+1.1
1,042,046	-		Pf1N1B4_916	0.84	-0.7
1,042,046	-		Pf1N1B4_916	0.84	+1.7
1,042,046	-		Pf1N1B4_916	0.84	+1.1
1,042,046	-		Pf1N1B4_916	0.84	+0.1
1,042,046	-		Pf1N1B4_916	0.84	-0.3
1,042,063	+		Pf1N1B4_916	0.85	+0.1
1,042,064	-		Pf1N1B4_916	0.85	-0.9
1,042,064	-		Pf1N1B4_916	0.85	-0.2
1,042,127	+				+0.9
1,042,127	+				-1.4
1,042,128	-				+0.1
1,042,171	+				-0.3
1,042,259	+				+0.4
1,042,259	+				-1.3
1,042,259	+				+0.1
1,042,259	+				-0.9
1,042,260	-				+0.1
1,042,260	-				-0.9
1,042,299	+				-0.3
1,042,299	+				+0.3
1,042,300	-				+1.9
1,042,341	+				+0.1
1,042,341	+				+0.1
1,042,342	-				+0.7
1,042,342	-				+0.7
1,042,342	-				+0.3
1,042,342	-				+0.4
1,042,342	-				+0.5
1,042,342	-				+0.8
1,042,342	-				-1.3
1,042,342	-				-0.6
1,042,342	-				+1.0
1,042,342	-				+0.4
1,042,342	-				+0.1
1,042,342	-				+1.5
1,042,342	-				+0.7
1,042,369	-				-0.5
1,042,426	+				-1.9
1,042,427	-				+0.1
1,042,427	-				-0.9
1,042,461	+		Pf1N1B4_917	0.11	-1.7
1,042,462	-		Pf1N1B4_917	0.11	+0.1
1,042,462	-		Pf1N1B4_917	0.11	+0.1
1,042,462	-		Pf1N1B4_917	0.11	-1.5
1,042,462	-		Pf1N1B4_917	0.11	-1.7
1,042,462	-		Pf1N1B4_917	0.11	-0.9
1,042,547	-		Pf1N1B4_917	0.19	-0.9
1,042,547	-		Pf1N1B4_917	0.19	+0.1
1,042,547	-		Pf1N1B4_917	0.19	-0.7
1,042,547	-		Pf1N1B4_917	0.19	+1.4
1,042,547	-		Pf1N1B4_917	0.19	-1.5
1,042,547	-		Pf1N1B4_917	0.19	-1.5
1,042,547	-		Pf1N1B4_917	0.19	-1.2
1,042,547	-		Pf1N1B4_917	0.19	-0.6
1,042,679	-		Pf1N1B4_917	0.32	+0.3
1,042,731	+				-1.9
1,042,732	-				+0.1
1,042,732	-		Pf1N1B4_917	0.37	+1.2
1,042,732	-		Pf1N1B4_917	0.37	+0.1
1,042,732	-		Pf1N1B4_917	0.37	-0.3
1,042,732	-		Pf1N1B4_917	0.37	+0.1
1,042,860	+		Pf1N1B4_917	0.50	+0.1
1,042,860	+		Pf1N1B4_917	0.50	+0.3
1,042,861	-		Pf1N1B4_917	0.50	-0.3
1,042,861	-		Pf1N1B4_917	0.50	+0.1
1,042,885	-		Pf1N1B4_917	0.52	-0.3
1,043,001	+		Pf1N1B4_917	0.63	+0.1
1,043,001	+		Pf1N1B4_917	0.63	-1.8
1,043,004	+		Pf1N1B4_917	0.63	+0.3
1,043,004	+		Pf1N1B4_917	0.63	+0.1
1,043,004	+		Pf1N1B4_917	0.63	+0.8
1,043,005	-		Pf1N1B4_917	0.64	+0.1
1,043,005	-				+1.1
1,043,005	-		Pf1N1B4_917	0.64	-0.7
1,043,005	-		Pf1N1B4_917	0.64	+0.1
1,043,255	+		Pf1N1B4_917	0.88	-0.5
1,043,255	+		Pf1N1B4_917	0.88	-0.0
1,043,256	-		Pf1N1B4_917	0.88	-1.3
1,043,256	-		Pf1N1B4_917	0.88	+1.7
1,043,469	-				+1.0
1,043,483	+				-0.3
1,043,483	+				-0.5
1,043,484	-				+0.5
1,043,484	-				+0.1
1,043,504	+				-0.3
1,043,505	-				+1.1
1,043,505	-				+0.8
1,043,505	-				+2.9
1,043,505	-				-0.9
1,043,508	-				+0.3
1,043,508	-				+0.9
1,043,530	+				+0.1
1,043,530	+				+0.1
1,043,531	-				+0.8
1,043,531	-				-0.2
1,043,565	-				-0.5
1,043,565	-				+0.6
1,043,646	+				-1.5
1,043,646	+				+0.1
1,043,647	-				+0.4
1,043,647	-				-1.5
1,043,647	-				+1.0
1,043,647	-				-0.9
1,043,647	-				+2.1
1,043,647	-				+0.8
1,043,647	-				+1.0
1,043,647	-				+2.7
1,043,647	-				+0.8
1,043,647	-				+1.8
1,043,654	+				-0.3
1,043,654	+				+0.1
1,043,655	-				+0.3
1,043,655	-				+1.5
1,043,655	-				+1.1
1,043,655	-				+1.2
1,043,655	-				-2.7
1,043,655	-				+0.3
1,043,655	-				+1.2
1,043,670	+				+1.1
1,043,671	-				+0.8
1,043,671	-				+1.7
1,043,671	-				+0.6
1,043,671	-				+3.8
1,043,671	-				+1.2
1,043,780	+				+1.7
1,043,781	-				+0.9
1,043,794	-				+0.9
1,043,794	-				-0.3
1,043,794	-				-0.4
1,043,817	+				-1.1
1,043,818	-				+1.3
1,043,818	-				+0.4
1,043,818	-				+1.1
1,043,818	-				+0.1
1,043,993	-		Pf1N1B4_918	0.22	+1.7
1,044,051	+		Pf1N1B4_918	0.31	+0.3
1,044,058	+		Pf1N1B4_918	0.32	+0.1
1,044,059	-		Pf1N1B4_918	0.32	+0.4
1,044,059	-		Pf1N1B4_918	0.32	+0.7
1,044,059	-		Pf1N1B4_918	0.32	+1.1
1,044,059	-		Pf1N1B4_918	0.32	+2.1
1,044,158	-		Pf1N1B4_918	0.47	+0.1
1,044,158	-		Pf1N1B4_918	0.47	+2.8
1,044,208	+		Pf1N1B4_918	0.54	-0.7
1,044,209	-		Pf1N1B4_918	0.55	-1.2
1,044,209	-		Pf1N1B4_918	0.55	+0.1
1,044,253	+		Pf1N1B4_918	0.61	-0.9
1,044,253	+		Pf1N1B4_918	0.61	+1.7
1,044,254	-		Pf1N1B4_918	0.61	+0.7
1,044,254	-		Pf1N1B4_918	0.61	+1.4
1,044,254	-		Pf1N1B4_918	0.61	+0.1
1,044,254	-		Pf1N1B4_918	0.61	+0.7
1,044,270	+		Pf1N1B4_918	0.64	-0.5
1,044,270	+		Pf1N1B4_918	0.64	+0.6
1,044,271	-		Pf1N1B4_918	0.64	+0.7
1,044,271	-		Pf1N1B4_918	0.64	-0.2
1,044,348	+				-1.5
1,044,348	+		Pf1N1B4_918	0.76	+0.5
1,044,349	-		Pf1N1B4_918	0.76	+0.9