Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2258

Experiment: D-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (N)
2,573,663	-				+1.4
2,573,716	+		Pf1N1B4_2257	0.21	+1.0
2,573,717	-		Pf1N1B4_2257	0.21	+1.4
2,573,717	-		Pf1N1B4_2257	0.21	+0.2
2,573,717	-		Pf1N1B4_2257	0.21	-1.9
2,573,719	+		Pf1N1B4_2257	0.21	+0.9
2,573,719	+				+0.4
2,573,719	+		Pf1N1B4_2257	0.21	+1.4
2,573,719	+		Pf1N1B4_2257	0.21	-1.6
2,573,719	+		Pf1N1B4_2257	0.21	-1.4
2,573,719	+		Pf1N1B4_2257	0.21	+2.0
2,573,720	-		Pf1N1B4_2257	0.21	-0.0
2,573,720	-		Pf1N1B4_2257	0.21	+0.7
2,573,720	-		Pf1N1B4_2257	0.21	+2.2
2,573,720	-		Pf1N1B4_2257	0.21	+0.4
2,573,720	-		Pf1N1B4_2257	0.21	+2.0
2,573,720	-		Pf1N1B4_2257	0.21	+0.8
2,573,720	-		Pf1N1B4_2257	0.21	+0.9
2,573,720	-		Pf1N1B4_2257	0.21	+1.6
2,573,720	-		Pf1N1B4_2257	0.21	+0.9
2,573,720	-		Pf1N1B4_2257	0.21	+0.1
2,573,968	+		Pf1N1B4_2257	0.42	-0.6
2,573,968	+		Pf1N1B4_2257	0.42	+0.4
2,573,968	+		Pf1N1B4_2257	0.42	+1.4
2,573,968	+		Pf1N1B4_2257	0.42	-0.6
2,573,968	+		Pf1N1B4_2257	0.42	+0.4
2,573,968	+		Pf1N1B4_2257	0.42	-0.0
2,573,968	+		Pf1N1B4_2257	0.42	+0.4
2,573,968	+		Pf1N1B4_2257	0.42	+2.7
2,573,968	+		Pf1N1B4_2257	0.42	-1.9
2,573,968	+		Pf1N1B4_2257	0.42	+0.4
2,573,968	+		Pf1N1B4_2257	0.42	+0.4
2,573,968	+		Pf1N1B4_2257	0.42	+0.1
2,573,968	+		Pf1N1B4_2257	0.42	+0.4
2,573,968	+		Pf1N1B4_2257	0.42	-0.0
2,573,968	+		Pf1N1B4_2257	0.42	+1.7
2,573,968	+		Pf1N1B4_2257	0.42	+2.2
2,573,968	+		Pf1N1B4_2257	0.42	-1.2
2,573,968	+		Pf1N1B4_2257	0.42	+0.8
2,573,968	+		Pf1N1B4_2257	0.42	+1.0
2,573,968	+		Pf1N1B4_2257	0.42	-0.2
2,573,968	+		Pf1N1B4_2257	0.42	+1.4
2,573,968	+		Pf1N1B4_2257	0.42	+2.0
2,573,968	+		Pf1N1B4_2257	0.42	+0.4
2,573,968	+		Pf1N1B4_2257	0.42	-0.6
2,573,968	+		Pf1N1B4_2257	0.42	+0.4
2,573,968	+		Pf1N1B4_2257	0.42	+0.4
2,573,968	+		Pf1N1B4_2257	0.42	+1.0
2,573,968	+		Pf1N1B4_2257	0.42	-0.0
2,573,968	+				+1.4
2,573,968	+		Pf1N1B4_2257	0.42	+0.6
2,573,969	-		Pf1N1B4_2257	0.42	+1.1
2,573,969	-		Pf1N1B4_2257	0.42	-0.2
2,573,969	-		Pf1N1B4_2257	0.42	-2.1
2,573,969	-		Pf1N1B4_2257	0.42	-2.2
2,573,969	-		Pf1N1B4_2257	0.42	+0.6
2,573,969	-		Pf1N1B4_2257	0.42	+1.0
2,573,969	-		Pf1N1B4_2257	0.42	+0.2
2,573,969	-		Pf1N1B4_2257	0.42	+2.0
2,573,969	-		Pf1N1B4_2257	0.42	+1.6
2,573,969	-		Pf1N1B4_2257	0.42	-0.9
2,573,969	-		Pf1N1B4_2257	0.42	+1.2
2,573,969	-		Pf1N1B4_2257	0.42	+0.6
2,573,969	-		Pf1N1B4_2257	0.42	-2.6
2,573,969	-		Pf1N1B4_2257	0.42	-0.2
2,573,969	-		Pf1N1B4_2257	0.42	-0.0
2,573,969	-		Pf1N1B4_2257	0.42	+1.4
2,573,969	-		Pf1N1B4_2257	0.42	-1.6
2,573,969	-		Pf1N1B4_2257	0.42	+1.4
2,573,969	-		Pf1N1B4_2257	0.42	+1.4
2,573,969	-		Pf1N1B4_2257	0.42	+0.9
2,573,969	-		Pf1N1B4_2257	0.42	-0.5
2,573,969	-		Pf1N1B4_2257	0.42	+0.2
2,573,969	-		Pf1N1B4_2257	0.42	+0.2
2,573,969	-		Pf1N1B4_2257	0.42	+0.8
2,573,969	-		Pf1N1B4_2257	0.42	-0.3
2,573,969	-		Pf1N1B4_2257	0.42	+0.7
2,573,969	-		Pf1N1B4_2257	0.42	+0.4
2,573,969	-		Pf1N1B4_2257	0.42	+2.1
2,573,969	-		Pf1N1B4_2257	0.42	+1.0
2,573,969	-		Pf1N1B4_2257	0.42	-0.2
2,573,969	-		Pf1N1B4_2257	0.42	+2.2
2,573,969	-		Pf1N1B4_2257	0.42	-1.6
2,573,969	-		Pf1N1B4_2257	0.42	+1.7
2,573,969	-		Pf1N1B4_2257	0.42	+0.8
2,573,969	-		Pf1N1B4_2257	0.42	-0.0
2,573,969	-		Pf1N1B4_2257	0.42	+1.4
2,573,969	-		Pf1N1B4_2257	0.42	-0.6
2,573,970	+		Pf1N1B4_2257	0.42	+0.4
2,573,970	+		Pf1N1B4_2257	0.42	+0.1
2,573,970	+		Pf1N1B4_2257	0.42	+1.0
2,573,970	+		Pf1N1B4_2257	0.42	-0.1
2,573,970	+		Pf1N1B4_2257	0.42	+0.7
2,573,971	-		Pf1N1B4_2257	0.42	+1.6
2,573,971	-		Pf1N1B4_2257	0.42	-0.2
2,573,971	-		Pf1N1B4_2257	0.42	-0.2
2,574,025	+		Pf1N1B4_2257	0.47	+1.4
2,574,069	+		Pf1N1B4_2257	0.50	-2.6
2,574,187	+		Pf1N1B4_2257	0.60	-1.6
2,574,187	+		Pf1N1B4_2257	0.60	+0.8
2,574,187	+		Pf1N1B4_2257	0.60	+0.4
2,574,220	+		Pf1N1B4_2257	0.63	+0.1
2,574,220	+		Pf1N1B4_2257	0.63	-0.4
2,574,221	-		Pf1N1B4_2257	0.63	-1.6
2,574,221	-		Pf1N1B4_2257	0.63	-0.0
2,574,295	+		Pf1N1B4_2257	0.69	+0.1
2,574,296	-		Pf1N1B4_2257	0.69	+0.4
2,574,296	-		Pf1N1B4_2257	0.69	-0.0
2,574,346	+				+0.4
2,574,346	+		Pf1N1B4_2257	0.73	+1.4
2,574,347	-		Pf1N1B4_2257	0.73	+1.8
2,574,347	-		Pf1N1B4_2257	0.73	+0.1
2,574,347	-		Pf1N1B4_2257	0.73	+0.4
2,574,347	-		Pf1N1B4_2257	0.73	-0.4
2,574,347	-		Pf1N1B4_2257	0.73	+0.4
2,574,348	+		Pf1N1B4_2257	0.73	+0.4
2,574,349	-		Pf1N1B4_2257	0.74	+1.6
2,574,430	+		Pf1N1B4_2257	0.80	-0.0
2,574,431	-		Pf1N1B4_2257	0.80	-0.4
2,574,477	+		Pf1N1B4_2257	0.84	+1.7
2,574,477	+		Pf1N1B4_2257	0.84	+1.1
2,574,529	+		Pf1N1B4_2257	0.89	+0.9
2,574,529	+		Pf1N1B4_2257	0.89	+3.0
2,574,529	+		Pf1N1B4_2257	0.89	+0.4
2,574,530	-		Pf1N1B4_2257	0.89	+0.4
2,574,530	-		Pf1N1B4_2257	0.89	+0.1
2,574,749	+		Pf1N1B4_2258	0.52	-0.6
2,574,749	+		Pf1N1B4_2258	0.52	+0.4
2,574,750	-		Pf1N1B4_2258	0.53	-0.4
2,574,825	+				+1.4
2,574,825	+				+1.1
2,574,826	-				+1.1
2,574,826	-				+0.9
2,574,826	-				-0.2
2,574,832	+				+0.4
2,574,833	-				-0.2
2,574,833	-				-0.0
2,574,833	-				+0.8
2,574,924	+				-1.2
2,574,969	+				+0.1
2,575,005	+				-0.6
2,575,005	+				-0.1
2,575,005	+				-0.2
2,575,005	+				+0.1
2,575,005	+				-0.0
2,575,005	+				-0.9
2,575,005	+				+0.1
2,575,006	-				-0.6
2,575,006	-				+2.4
2,575,006	-				+0.3
2,575,006	-				-0.1
2,575,006	-				+0.6
2,575,006	-				+2.4
2,575,006	-				+0.4
2,575,006	-				+0.4
2,575,009	+				-0.9
2,575,009	+				+1.4
2,575,010	-				-0.2
2,575,010	-				-1.2
2,575,010	-				-0.2
2,575,017	+				-0.9
2,575,017	+				-0.2
2,575,017	+				+0.7
2,575,017	+				+1.5
2,575,017	+				+0.4
2,575,017	+				-1.2
2,575,017	+				-0.6
2,575,018	-				-0.2
2,575,018	-				-0.6
2,575,018	-				+1.5
2,575,018	-				-1.2
2,575,018	-				+1.0
2,575,018	-				-1.6
2,575,018	-				-0.8
2,575,018	-				-0.4
2,575,100	+				+0.4
2,575,100	+				-0.1
2,575,101	-				+0.7
2,575,101	-				+2.0
2,575,101	-				-0.4
2,575,101	-				-1.5
2,575,115	+		Pf1N1B4_2259	0.11	+0.4
2,575,115	+		Pf1N1B4_2259	0.11	-1.1
2,575,115	+		Pf1N1B4_2259	0.11	+0.4
2,575,116	-		Pf1N1B4_2259	0.11	+0.5
2,575,116	-		Pf1N1B4_2259	0.11	+1.1
2,575,116	-		Pf1N1B4_2259	0.11	-0.4
2,575,116	-		Pf1N1B4_2259	0.11	+0.8
2,575,172	+		Pf1N1B4_2259	0.16	+0.5
2,575,290	-		Pf1N1B4_2259	0.27	+1.0
2,575,394	+		Pf1N1B4_2259	0.36	-0.6
2,575,394	+		Pf1N1B4_2259	0.36	-1.0
2,575,395	-		Pf1N1B4_2259	0.36	+0.4
2,575,395	-		Pf1N1B4_2259	0.36	-0.6
2,575,395	-		Pf1N1B4_2259	0.36	+1.2
2,575,395	-		Pf1N1B4_2259	0.36	-0.6
2,575,575	-		Pf1N1B4_2259	0.52	+0.4
2,575,575	-		Pf1N1B4_2259	0.52	-0.4
2,575,662	-		Pf1N1B4_2259	0.60	+1.5
2,575,662	-		Pf1N1B4_2259	0.60	+1.2
2,575,680	-		Pf1N1B4_2259	0.62	+1.4
2,575,680	-		Pf1N1B4_2259	0.62	+0.8
2,575,680	-		Pf1N1B4_2259	0.62	+0.4
2,575,680	-		Pf1N1B4_2259	0.62	-0.9
2,575,680	-		Pf1N1B4_2259	0.62	+1.0
2,575,680	-		Pf1N1B4_2259	0.62	+0.6
2,575,740	-		Pf1N1B4_2259	0.67	+1.0
2,575,740	-		Pf1N1B4_2259	0.67	-0.6
2,575,740	-		Pf1N1B4_2259	0.67	+2.0
2,575,740	-		Pf1N1B4_2259	0.67	-0.2
2,575,740	-		Pf1N1B4_2259	0.67	-0.6
2,575,740	-		Pf1N1B4_2259	0.67	+0.4
2,575,740	-		Pf1N1B4_2259	0.67	+0.4
2,575,790	+		Pf1N1B4_2259	0.71	+1.8
2,575,790	+		Pf1N1B4_2259	0.71	-0.4
2,575,790	+		Pf1N1B4_2259	0.71	-1.2
2,575,791	-		Pf1N1B4_2259	0.72	-0.9
2,575,791	-		Pf1N1B4_2259	0.72	+0.4
2,575,823	+		Pf1N1B4_2259	0.74	+1.0
2,575,824	-		Pf1N1B4_2259	0.74	-0.0
2,575,824	-		Pf1N1B4_2259	0.74	+0.5
2,575,824	-		Pf1N1B4_2259	0.74	+0.0
2,575,824	-		Pf1N1B4_2259	0.74	-0.4