Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23170

Experiment: a-Cyclodextrin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23165 and BWI76_RS23170 overlap by 4 nucleotidesBWI76_RS23170 and BWI76_RS23175 are separated by 11 nucleotides BWI76_RS23165: BWI76_RS23165 - ATP:cob(I)alamin adenosyltransferase, at 4,825,959 to 4,826,969 _RS23165 BWI76_RS23170: BWI76_RS23170 - aldehyde dehydrogenase EutE, at 4,826,966 to 4,828,357 _RS23170 BWI76_RS23175: BWI76_RS23175 - propanediol utilization protein, at 4,828,369 to 4,829,481 _RS23175 Position (kb) 4826 4827 4828 4829Strain fitness (log2 ratio) -1 0 1 2at 4825.973 kb on - strandat 4826.213 kb on + strand, within BWI76_RS23165at 4826.266 kb on + strand, within BWI76_RS23165at 4826.442 kb on + strand, within BWI76_RS23165at 4826.457 kb on + strand, within BWI76_RS23165at 4826.550 kb on + strand, within BWI76_RS23165at 4826.580 kb on - strand, within BWI76_RS23165at 4826.996 kb on - strandat 4827.014 kb on + strandat 4827.104 kb on + strandat 4827.265 kb on + strand, within BWI76_RS23170at 4827.389 kb on - strand, within BWI76_RS23170at 4827.415 kb on - strand, within BWI76_RS23170at 4827.474 kb on + strand, within BWI76_RS23170at 4827.482 kb on - strand, within BWI76_RS23170at 4827.688 kb on + strand, within BWI76_RS23170at 4828.247 kb on + strandat 4828.469 kb on + strandat 4828.491 kb on + strand, within BWI76_RS23175at 4828.499 kb on - strand, within BWI76_RS23175at 4828.579 kb on + strand, within BWI76_RS23175at 4828.739 kb on + strand, within BWI76_RS23175at 4828.747 kb on - strand, within BWI76_RS23175at 4828.784 kb on + strand, within BWI76_RS23175at 4828.825 kb on - strand, within BWI76_RS23175at 4829.095 kb on + strand, within BWI76_RS23175at 4829.168 kb on - strand, within BWI76_RS23175

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Cyclodextrin (C)
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4,825,973 - +1.1
4,826,213 + BWI76_RS23165 0.25 +0.6
4,826,266 + BWI76_RS23165 0.30 -0.1
4,826,442 + BWI76_RS23165 0.48 -0.2
4,826,457 + BWI76_RS23165 0.49 -1.4
4,826,550 + BWI76_RS23165 0.58 +1.8
4,826,580 - BWI76_RS23165 0.61 -0.2
4,826,996 - -0.1
4,827,014 + -0.5
4,827,104 + -0.7
4,827,265 + BWI76_RS23170 0.21 +0.2
4,827,389 - BWI76_RS23170 0.30 +0.0
4,827,415 - BWI76_RS23170 0.32 +0.1
4,827,474 + BWI76_RS23170 0.36 +2.6
4,827,482 - BWI76_RS23170 0.37 +0.5
4,827,688 + BWI76_RS23170 0.52 -0.8
4,828,247 + +0.0
4,828,469 + +0.3
4,828,491 + BWI76_RS23175 0.11 -0.5
4,828,499 - BWI76_RS23175 0.12 -0.2
4,828,579 + BWI76_RS23175 0.19 -1.3
4,828,739 + BWI76_RS23175 0.33 -0.6
4,828,747 - BWI76_RS23175 0.34 -0.5
4,828,784 + BWI76_RS23175 0.37 -1.3
4,828,825 - BWI76_RS23175 0.41 +0.1
4,829,095 + BWI76_RS23175 0.65 +0.0
4,829,168 - BWI76_RS23175 0.72 +0.1

Or see this region's nucleotide sequence