Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS04790

Experiment: a-Cyclodextrin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS04785 and BWI76_RS04790 are separated by 100 nucleotidesBWI76_RS04790 and BWI76_RS04795 are separated by 247 nucleotidesBWI76_RS04795 and BWI76_RS04800 are separated by 62 nucleotides BWI76_RS04785: BWI76_RS04785 - cell division protein FtsZ, at 999,607 to 1,000,758 _RS04785 BWI76_RS04790: BWI76_RS04790 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, at 1,000,859 to 1,001,776 _RS04790 BWI76_RS04795: BWI76_RS04795 - SecA regulator SecM, at 1,002,024 to 1,002,533 _RS04795 BWI76_RS04800: BWI76_RS04800 - preprotein translocase subunit SecA, at 1,002,596 to 1,005,301 _RS04800 Position (kb) 1000 1001 1002Strain fitness (log2 ratio) -1 0 1at 1001.716 kb on - strandat 1001.764 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Cyclodextrin (C)
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1,001,716 - -0.9
1,001,764 + +0.5

Or see this region's nucleotide sequence