Experiment: MoLS4 with limited (C) D,L-Lactate (7mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1762 and DVU1764 are separated by 793 nucleotides DVU1764 and thiH are separated by 27 nucleotides
DVU1762: DVU1762 - membrane protein, putative (TIGR), at 1,825,786 to 1,826,244
DVU1762
DVU1764: DVU1764 - conserved hypothetical protein (TIGR), at 1,827,038 to 1,827,307
DVU1764
DVU1765: thiH - thiH protein, putative (TIGR), at 1,827,335 to 1,828,729
thiH
Position (kb)
1827
1828 Strain fitness (log2 ratio)
-2
-1
0
1 at 1826.132 kb on - strand, within DVU1762 at 1826.396 kb on - strand at 1826.420 kb on + strand at 1826.420 kb on + strand at 1826.428 kb on - strand at 1826.442 kb on + strand at 1826.450 kb on - strand at 1826.451 kb on - strand at 1826.451 kb on - strand at 1826.451 kb on - strand at 1826.504 kb on - strand at 1826.672 kb on - strand at 1826.730 kb on + strand at 1826.730 kb on + strand at 1826.814 kb on + strand at 1826.814 kb on + strand at 1826.814 kb on + strand at 1826.814 kb on + strand at 1826.822 kb on - strand at 1826.859 kb on + strand at 1826.867 kb on - strand at 1826.889 kb on - strand at 1826.926 kb on + strand at 1826.950 kb on - strand at 1826.973 kb on - strand at 1826.978 kb on - strand at 1827.014 kb on + strand at 1827.022 kb on - strand at 1827.060 kb on - strand at 1827.097 kb on + strand, within DVU1764 at 1827.156 kb on + strand, within DVU1764 at 1827.164 kb on - strand, within DVU1764 at 1827.281 kb on + strand at 1827.283 kb on + strand at 1827.310 kb on - strand at 1827.386 kb on + strand at 1827.598 kb on + strand, within thiH at 1827.599 kb on - strand, within thiH at 1827.670 kb on - strand, within thiH at 1827.769 kb on - strand, within thiH at 1827.876 kb on + strand, within thiH at 1827.958 kb on - strand, within thiH at 1827.992 kb on + strand, within thiH at 1828.000 kb on - strand, within thiH at 1828.100 kb on - strand, within thiH at 1828.101 kb on + strand, within thiH at 1828.109 kb on - strand, within thiH at 1828.119 kb on - strand, within thiH at 1828.127 kb on - strand, within thiH at 1828.241 kb on - strand, within thiH
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with limited (C) D,L-Lactate (7mM) remove 1,826,132 - DVU1762 0.75 -1.1 1,826,396 - +1.2 1,826,420 + +0.2 1,826,420 + +0.0 1,826,428 - -0.2 1,826,442 + +0.3 1,826,450 - -0.3 1,826,451 - -0.3 1,826,451 - -0.8 1,826,451 - -0.3 1,826,504 - -0.2 1,826,672 - -1.0 1,826,730 + -0.0 1,826,730 + -0.7 1,826,814 + +0.3 1,826,814 + +0.4 1,826,814 + -0.2 1,826,814 + -0.0 1,826,822 - +0.8 1,826,859 + -1.8 1,826,867 - -0.3 1,826,889 - +0.3 1,826,926 + -0.7 1,826,950 - -0.1 1,826,973 - -0.1 1,826,978 - -0.5 1,827,014 + +0.0 1,827,022 - -0.5 1,827,060 - -0.3 1,827,097 + DVU1764 0.22 -0.6 1,827,156 + DVU1764 0.44 -0.5 1,827,164 - DVU1764 0.47 -0.8 1,827,281 + -0.1 1,827,283 + -0.5 1,827,310 - +0.3 1,827,386 + +0.9 1,827,598 + thiH DVU1765 0.19 +0.1 1,827,599 - thiH DVU1765 0.19 -0.0 1,827,670 - thiH DVU1765 0.24 +0.3 1,827,769 - thiH DVU1765 0.31 -0.5 1,827,876 + thiH DVU1765 0.39 -1.1 1,827,958 - thiH DVU1765 0.45 -0.1 1,827,992 + thiH DVU1765 0.47 -0.4 1,828,000 - thiH DVU1765 0.48 -1.4 1,828,100 - thiH DVU1765 0.55 -0.3 1,828,101 + thiH DVU1765 0.55 +0.4 1,828,109 - thiH DVU1765 0.55 -0.7 1,828,119 - thiH DVU1765 0.56 +0.5 1,828,127 - thiH DVU1765 0.57 -0.2 1,828,241 - thiH DVU1765 0.65 +0.0
Or see this region's nucleotide sequence