Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2567

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
2,645,671	+				-0.5
2,645,751	-	ppiB	Synpcc7942_2566	0.21	+1.3
2,645,779	+				+1.5
2,645,878	+	ppiB	Synpcc7942_2566	0.32	+1.1
2,645,923	+	ppiB	Synpcc7942_2566	0.37	-2.3
2,646,124	-				+0.5
2,646,136	-	ppiB	Synpcc7942_2566	0.56	-0.5
2,646,184	-	ppiB	Synpcc7942_2566	0.60	+1.3
2,646,264	-	ppiB	Synpcc7942_2566	0.68	-1.1
2,646,423	-	ppiB	Synpcc7942_2566	0.82	-0.5
2,646,459	-	ppiB	Synpcc7942_2566	0.85	+3.5
2,646,526	+				+1.9
2,646,534	-				+1.3
2,646,574	+				-0.5
2,646,581	-				+2.9
2,646,615	+				+0.5
2,646,622	-				+0.8
2,646,622	-				-0.5
2,647,618	-				+1.5
2,647,626	+				-1.1
2,647,626	+				-0.5
2,647,672	+				-2.1
2,647,712	-		Synpcc7942_2568	0.18	-1.7
2,647,725	+		Synpcc7942_2568	0.20	-1.5
2,647,759	+		Synpcc7942_2568	0.28	-3.2
2,647,795	+		Synpcc7942_2568	0.35	+0.2
2,647,807	+		Synpcc7942_2568	0.38	-2.3
2,647,807	+		Synpcc7942_2568	0.38	-1.1
2,647,861	+		Synpcc7942_2568	0.49	-1.8
2,647,931	-		Synpcc7942_2568	0.64	-3.6
2,647,957	+		Synpcc7942_2568	0.69	-1.8
2,647,958	+		Synpcc7942_2568	0.70	-2.3
2,647,980	-		Synpcc7942_2568	0.74	-1.5
2,648,038	-		Synpcc7942_2568	0.86	+1.5
2,648,043	+		Synpcc7942_2568	0.88	-1.9
2,648,051	-		Synpcc7942_2568	0.89	-2.5
2,648,075	+				-0.9
2,648,097	+				-0.5
2,648,107	-				+2.3