Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2352

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
2,418,714	-		Synpcc7942_2351	0.33	-1.1
2,419,052	-		Synpcc7942_2351	0.61	-0.3
2,419,053	+		Synpcc7942_2351	0.61	-2.3
2,419,118	+		Synpcc7942_2351	0.67	-1.8
2,419,556	-				-0.5
2,419,573	+				-0.2
2,419,593	-				-1.2
2,419,593	-				+0.1
2,419,723	-	lrtA	Synpcc7942_2352	0.24	-1.3
2,419,729	+	lrtA	Synpcc7942_2352	0.25	-2.3
2,419,766	-	lrtA	Synpcc7942_2352	0.31	-0.2
2,419,767	-	lrtA	Synpcc7942_2352	0.31	-1.5
2,419,879	+	lrtA	Synpcc7942_2352	0.49	+0.8
2,419,879	+	lrtA	Synpcc7942_2352	0.49	+1.2
2,420,231	+				-1.1
2,420,309	+				-1.8
2,420,386	+				+0.9
2,421,141	+				+0.1
2,421,182	+				+0.3
2,421,187	+				-0.5