Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2273

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
2,339,169	-				+0.5
2,339,205	-		Synpcc7942_2271	0.29	+0.2
2,339,207	+		Synpcc7942_2271	0.29	+0.2
2,339,250	-		Synpcc7942_2271	0.37	-0.6
2,339,250	-		Synpcc7942_2271	0.37	+1.0
2,339,251	+		Synpcc7942_2271	0.37	-2.3
2,339,279	+		Synpcc7942_2271	0.42	-0.1
2,339,287	-		Synpcc7942_2271	0.44	+0.9
2,339,362	-		Synpcc7942_2271	0.57	-0.6
2,339,433	-		Synpcc7942_2271	0.70	+0.1
2,339,453	+		Synpcc7942_2271	0.74	-2.5
2,339,461	-		Synpcc7942_2271	0.75	-2.7
2,339,524	-		Synpcc7942_2271	0.87	+0.5
2,339,550	+				-2.5
2,339,556	+				-1.1
2,339,594	-				-2.8
2,339,594	-				+0.5
2,339,602	+				+1.8
2,339,611	-				+1.1
2,339,629	-				+2.1
2,340,138	+				+1.8
2,340,153	+				+0.5
2,340,181	+				+0.4
2,340,213	-				+1.1
2,340,229	+				-0.5
2,340,229	+				+0.5
2,340,250	+		Synpcc7942_2273	0.13	+1.1
2,340,258	-		Synpcc7942_2273	0.14	+2.8
2,340,258	-		Synpcc7942_2273	0.14	+0.5
2,340,262	+		Synpcc7942_2273	0.14	-0.5
2,340,262	+		Synpcc7942_2273	0.14	-1.7
2,340,270	-		Synpcc7942_2273	0.15	-0.9
2,340,272	+		Synpcc7942_2273	0.15	+0.5
2,340,273	+		Synpcc7942_2273	0.16	+0.5
2,340,278	+		Synpcc7942_2273	0.16	-0.2
2,340,287	-		Synpcc7942_2273	0.17	+0.3
2,340,317	+		Synpcc7942_2273	0.21	+0.5
2,340,318	+		Synpcc7942_2273	0.21	-0.3
2,340,326	-		Synpcc7942_2273	0.23	-1.1
2,340,337	+		Synpcc7942_2273	0.24	+1.1
2,340,341	+		Synpcc7942_2273	0.24	+1.0
2,340,397	+		Synpcc7942_2273	0.32	+1.5
2,340,416	+		Synpcc7942_2273	0.34	-0.0
2,340,424	-		Synpcc7942_2273	0.35	+1.2
2,340,473	-		Synpcc7942_2273	0.42	+0.1
2,340,473	-				+2.1
2,340,481	-		Synpcc7942_2273	0.43	+0.5
2,340,489	+		Synpcc7942_2273	0.44	+1.5
2,340,499	+		Synpcc7942_2273	0.45	+1.6
2,340,504	+		Synpcc7942_2273	0.46	-1.8
2,340,543	+		Synpcc7942_2273	0.51	+1.3
2,340,543	+		Synpcc7942_2273	0.51	-0.0
2,340,543	+		Synpcc7942_2273	0.51	-2.1
2,340,551	-		Synpcc7942_2273	0.52	-1.5
2,340,551	-		Synpcc7942_2273	0.52	+2.3
2,340,551	-		Synpcc7942_2273	0.52	-2.9
2,340,551	-		Synpcc7942_2273	0.52	-2.1
2,340,552	+		Synpcc7942_2273	0.52	-0.5
2,340,558	-		Synpcc7942_2273	0.53	+0.3
2,340,591	+		Synpcc7942_2273	0.57	-1.3
2,340,610	-		Synpcc7942_2273	0.60	+2.5
2,340,620	+		Synpcc7942_2273	0.61	-0.5
2,340,625	+		Synpcc7942_2273	0.61	+0.5
2,340,628	-		Synpcc7942_2273	0.62	-2.5
2,340,633	-		Synpcc7942_2273	0.62	-2.5
2,340,635	+				-0.5
2,340,635	-		Synpcc7942_2273	0.63	+3.9
2,340,641	-		Synpcc7942_2273	0.64	+0.5
2,340,664	-		Synpcc7942_2273	0.67	-1.0
2,340,677	+		Synpcc7942_2273	0.68	-2.3
2,340,689	+		Synpcc7942_2273	0.70	+0.7
2,340,700	+		Synpcc7942_2273	0.71	+0.3
2,340,729	+		Synpcc7942_2273	0.75	+1.1
2,340,746	+		Synpcc7942_2273	0.77	-2.3
2,340,771	+		Synpcc7942_2273	0.80	-1.5
2,340,778	-		Synpcc7942_2273	0.81	+1.5
2,340,784	-		Synpcc7942_2273	0.82	-1.5
2,340,799	-		Synpcc7942_2273	0.84	-1.8
2,340,824	+		Synpcc7942_2273	0.87	-1.1
2,340,832	+		Synpcc7942_2273	0.88	-0.5
2,340,832	+		Synpcc7942_2273	0.88	+2.6
2,340,833	-				+2.1
2,340,840	-		Synpcc7942_2273	0.89	+0.5
2,340,840	-		Synpcc7942_2273	0.89	-1.2
2,340,840	-		Synpcc7942_2273	0.89	-1.5
2,340,851	+				-2.3
2,340,867	+				+0.5
2,340,870	-				-1.1
2,340,875	-				-1.1
2,340,876	-				+0.3
2,340,955	-				-1.1
2,340,970	-				+0.2