Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2257

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
2,325,704	+		Synpcc7942_2255	0.45	-3.1
2,325,705	+		Synpcc7942_2255	0.46	-1.5
2,325,735	-		Synpcc7942_2255	0.53	+1.2
2,325,798	+		Synpcc7942_2255	0.69	-2.3
2,325,808	+		Synpcc7942_2255	0.71	-0.2
2,325,816	-		Synpcc7942_2255	0.73	-1.3
2,325,857	+		Synpcc7942_2255	0.83	-0.0
2,325,902	+				-1.8
2,325,902	+				-2.5
2,325,902	+				-3.1
2,325,910	-				-2.5
2,325,923	+				-2.5
2,325,928	+				+0.7
2,325,936	-				-0.0
2,325,937	+				-1.7
2,325,950	+				+1.6
2,326,017	+				-3.1
2,326,082	-				+0.5
2,326,084	+				-1.1
2,326,094	-				+0.7
2,326,127	-		Synpcc7942_2256	0.12	-0.5
2,326,143	+		Synpcc7942_2256	0.15	+3.5
2,326,165	+		Synpcc7942_2256	0.19	-0.6
2,326,193	+		Synpcc7942_2256	0.24	+0.5
2,326,193	+		Synpcc7942_2256	0.24	-2.1
2,326,216	-		Synpcc7942_2256	0.28	-0.5
2,326,226	+		Synpcc7942_2256	0.30	+1.1
2,326,269	+		Synpcc7942_2256	0.37	-1.5
2,326,283	+		Synpcc7942_2256	0.40	+0.5
2,326,291	-		Synpcc7942_2256	0.41	-0.5
2,326,298	+				-0.5
2,326,315	+		Synpcc7942_2256	0.46	+1.3
2,326,323	-		Synpcc7942_2256	0.47	-0.7
2,326,323	-		Synpcc7942_2256	0.47	+1.8
2,326,323	-		Synpcc7942_2256	0.47	-0.5
2,326,325	-		Synpcc7942_2256	0.48	+0.5
2,326,328	-		Synpcc7942_2256	0.48	-2.5
2,326,359	+		Synpcc7942_2256	0.54	-1.1
2,326,359	+		Synpcc7942_2256	0.54	-0.2
2,326,359	+		Synpcc7942_2256	0.54	-2.1
2,326,359	+		Synpcc7942_2256	0.54	+0.0
2,326,359	+		Synpcc7942_2256	0.54	+3.6
2,326,359	+		Synpcc7942_2256	0.54	-1.5
2,326,359	+		Synpcc7942_2256	0.54	-1.3
2,326,359	+		Synpcc7942_2256	0.54	-0.7
2,326,359	+		Synpcc7942_2256	0.54	-0.0
2,326,359	+		Synpcc7942_2256	0.54	-1.5
2,326,359	+		Synpcc7942_2256	0.54	+0.1
2,326,359	+		Synpcc7942_2256	0.54	-0.5
2,326,359	+		Synpcc7942_2256	0.54	+3.3
2,326,359	+		Synpcc7942_2256	0.54	+2.0
2,326,359	+		Synpcc7942_2256	0.54	+0.1
2,326,359	+		Synpcc7942_2256	0.54	+1.4
2,326,359	+		Synpcc7942_2256	0.54	-1.6
2,326,359	+		Synpcc7942_2256	0.54	+0.5
2,326,359	+		Synpcc7942_2256	0.54	+0.3
2,326,367	-		Synpcc7942_2256	0.55	+0.4
2,326,367	-		Synpcc7942_2256	0.55	+0.5
2,326,367	-		Synpcc7942_2256	0.55	-0.8
2,326,367	-		Synpcc7942_2256	0.55	+0.4
2,326,367	-		Synpcc7942_2256	0.55	-1.3
2,326,367	-		Synpcc7942_2256	0.55	-1.0
2,326,367	-		Synpcc7942_2256	0.55	-0.5
2,326,367	-		Synpcc7942_2256	0.55	+3.3
2,326,367	-		Synpcc7942_2256	0.55	-1.1
2,326,367	-		Synpcc7942_2256	0.55	-2.1
2,326,367	-		Synpcc7942_2256	0.55	-0.1
2,326,367	-		Synpcc7942_2256	0.55	+1.3
2,326,367	-		Synpcc7942_2256	0.55	-0.1
2,326,367	-		Synpcc7942_2256	0.55	-1.7
2,326,385	-		Synpcc7942_2256	0.58	-0.5
2,326,411	-		Synpcc7942_2256	0.63	-0.5
2,326,417	+		Synpcc7942_2256	0.64	-0.5
2,326,417	-		Synpcc7942_2256	0.64	+2.1
2,326,445	-		Synpcc7942_2256	0.69	-0.1
2,326,449	-		Synpcc7942_2256	0.70	+0.9
2,326,487	-		Synpcc7942_2256	0.77	-2.1
2,326,525	-		Synpcc7942_2256	0.84	+2.5
2,326,536	-		Synpcc7942_2256	0.86	-0.4
2,326,536	-				-1.1
2,326,536	-		Synpcc7942_2256	0.86	-1.5
2,326,564	+				-2.1
2,326,586	-				+0.5
2,326,646	-				+0.2
2,326,671	-				+0.5
2,326,710	-		Synpcc7942_2257	0.27	-2.1
2,326,767	+		Synpcc7942_2257	0.61	-1.8
2,326,811	+		Synpcc7942_2257	0.87	+0.5
2,326,875	+				-2.7
2,326,893	-				-1.1
2,326,915	+				-1.1
2,326,928	-				-3.1
2,326,963	+				-0.3
2,327,017	+				-0.9
2,327,017	+				-0.8
2,327,051	+				+0.1
2,327,057	+				+1.1
2,327,058	-				+2.1
2,327,098	-				-2.6
2,327,099	-				+0.3
2,327,109	+				-2.0
2,327,123	-				-1.1
2,327,124	-				-0.1
2,327,159	+				+0.5
2,327,172	-	avtA	Synpcc7942_2258	0.12	-0.5
2,327,174	+	avtA	Synpcc7942_2258	0.13	-0.3
2,327,174	+	avtA	Synpcc7942_2258	0.13	+1.5
2,327,174	+	avtA	Synpcc7942_2258	0.13	+2.1
2,327,174	+	avtA	Synpcc7942_2258	0.13	+0.4
2,327,174	+	avtA	Synpcc7942_2258	0.13	-0.5
2,327,179	+	avtA	Synpcc7942_2258	0.13	-0.5
2,327,182	-	avtA	Synpcc7942_2258	0.13	+1.7
2,327,182	-	avtA	Synpcc7942_2258	0.13	+1.9
2,327,182	-	avtA	Synpcc7942_2258	0.13	-0.7
2,327,206	+	avtA	Synpcc7942_2258	0.15	-1.3
2,327,209	+	avtA	Synpcc7942_2258	0.15	+0.2
2,327,247	+	avtA	Synpcc7942_2258	0.18	+2.2
2,327,247	+	avtA	Synpcc7942_2258	0.18	+0.7
2,327,247	+	avtA	Synpcc7942_2258	0.18	+1.1
2,327,247	+	avtA	Synpcc7942_2258	0.18	+0.2
2,327,254	+	avtA	Synpcc7942_2258	0.19	-0.9
2,327,254	+	avtA	Synpcc7942_2258	0.19	+3.1
2,327,255	-	avtA	Synpcc7942_2258	0.19	-0.9
2,327,255	-	avtA	Synpcc7942_2258	0.19	-2.5
2,327,255	-	avtA	Synpcc7942_2258	0.19	-1.8
2,327,257	+	avtA	Synpcc7942_2258	0.19	-1.7
2,327,262	-	avtA	Synpcc7942_2258	0.19	-1.1
2,327,262	-	avtA	Synpcc7942_2258	0.19	-0.2
2,327,286	-	avtA	Synpcc7942_2258	0.21	-2.5
2,327,305	-	avtA	Synpcc7942_2258	0.23	+0.9
2,327,389	+	avtA	Synpcc7942_2258	0.29	+2.7
2,327,397	-	avtA	Synpcc7942_2258	0.30	+1.2
2,327,402	-	avtA	Synpcc7942_2258	0.30	+0.0
2,327,435	+	avtA	Synpcc7942_2258	0.33	-1.1
2,327,541	-	avtA	Synpcc7942_2258	0.41	+2.3
2,327,559	+	avtA	Synpcc7942_2258	0.43	+0.7
2,327,602	-	avtA	Synpcc7942_2258	0.46	+2.4
2,327,628	+	avtA	Synpcc7942_2258	0.48	-0.5
2,327,642	+	avtA	Synpcc7942_2258	0.49	-1.1
2,327,658	+	avtA	Synpcc7942_2258	0.50	+1.3
2,327,666	-	avtA	Synpcc7942_2258	0.51	+0.5
2,327,666	-	avtA	Synpcc7942_2258	0.51	-3.0
2,327,666	-	avtA	Synpcc7942_2258	0.51	-0.1
2,327,673	+	avtA	Synpcc7942_2258	0.51	+1.7
2,327,688	+	avtA	Synpcc7942_2258	0.53	+0.7
2,327,737	+	avtA	Synpcc7942_2258	0.56	-1.1
2,327,738	-	avtA	Synpcc7942_2258	0.56	-0.5
2,327,744	+	avtA	Synpcc7942_2258	0.57	+0.5
2,327,757	-	avtA	Synpcc7942_2258	0.58	-0.1
2,327,761	+	avtA	Synpcc7942_2258	0.58	-1.0
2,327,815	+	avtA	Synpcc7942_2258	0.62	+0.5
2,327,815	+	avtA	Synpcc7942_2258	0.62	-2.7
2,327,823	-	avtA	Synpcc7942_2258	0.63	+0.1
2,327,823	-	avtA	Synpcc7942_2258	0.63	-0.5