Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1965

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
2,034,740	+				+2.2
2,034,769	-				+2.7
2,035,683	+				+1.7
2,035,683	+				-1.6
2,035,712	+				+0.1
2,035,714	+				+0.6
2,035,720	-				+1.4
2,035,720	-				+0.4
2,035,758	+				-2.2
2,035,771	-				-2.7
2,035,777	+				+0.1
2,035,811	-				-1.4
2,035,841	+				-3.9
2,035,849	-				-1.2
2,035,882	-				-2.3
2,035,939	-	ppx	Synpcc7942_1965	0.13	-1.2
2,035,980	+	ppx	Synpcc7942_1965	0.15	-0.6
2,036,005	-	ppx	Synpcc7942_1965	0.17	-3.7
2,036,014	+	ppx	Synpcc7942_1965	0.17	-3.4
2,036,037	-	ppx	Synpcc7942_1965	0.19	-1.9
2,036,037	-	ppx	Synpcc7942_1965	0.19	-2.3
2,036,037	-	ppx	Synpcc7942_1965	0.19	-1.6
2,036,039	+	ppx	Synpcc7942_1965	0.19	-2.0
2,036,058	-	ppx	Synpcc7942_1965	0.20	-2.2
2,036,083	+	ppx	Synpcc7942_1965	0.21	-2.4
2,036,094	+	ppx	Synpcc7942_1965	0.22	-3.6
2,036,142	+	ppx	Synpcc7942_1965	0.25	-2.2
2,036,142	+	ppx	Synpcc7942_1965	0.25	-3.5
2,036,142	+	ppx	Synpcc7942_1965	0.25	-1.9
2,036,150	-	ppx	Synpcc7942_1965	0.25	-4.2
2,036,150	-	ppx	Synpcc7942_1965	0.25	-2.2
2,036,150	-	ppx	Synpcc7942_1965	0.25	-0.2
2,036,150	-	ppx	Synpcc7942_1965	0.25	-0.2
2,036,267	-	ppx	Synpcc7942_1965	0.33	-2.6
2,036,286	+	ppx	Synpcc7942_1965	0.34	-3.2
2,036,286	+	ppx	Synpcc7942_1965	0.34	-2.4
2,036,314	-	ppx	Synpcc7942_1965	0.35	-2.4
2,036,316	+				+0.4
2,036,321	+	ppx	Synpcc7942_1965	0.36	-2.7
2,036,329	-				+0.4
2,036,335	+	ppx	Synpcc7942_1965	0.37	-2.4
2,036,350	-	ppx	Synpcc7942_1965	0.38	-3.0
2,036,380	+	ppx	Synpcc7942_1965	0.39	-2.4
2,036,380	+	ppx	Synpcc7942_1965	0.39	-3.6
2,036,380	+	ppx	Synpcc7942_1965	0.39	-1.6
2,036,380	+	ppx	Synpcc7942_1965	0.39	-1.9
2,036,438	+	ppx	Synpcc7942_1965	0.43	-0.6
2,036,446	-	ppx	Synpcc7942_1965	0.43	-2.6
2,036,457	+	ppx	Synpcc7942_1965	0.44	-2.6
2,036,471	+	ppx	Synpcc7942_1965	0.45	-1.6
2,036,479	-	ppx	Synpcc7942_1965	0.45	-2.4
2,036,479	-	ppx	Synpcc7942_1965	0.45	-3.2
2,036,493	+	ppx	Synpcc7942_1965	0.46	-2.6
2,036,509	-	ppx	Synpcc7942_1965	0.47	-3.7
2,036,509	-	ppx	Synpcc7942_1965	0.47	-0.4
2,036,516	-	ppx	Synpcc7942_1965	0.48	+0.4
2,036,537	+	ppx	Synpcc7942_1965	0.49	-2.3
2,036,551	-	ppx	Synpcc7942_1965	0.50	-0.2
2,036,552	+	ppx	Synpcc7942_1965	0.50	-2.4
2,036,559	-	ppx	Synpcc7942_1965	0.50	-1.9
2,036,560	-	ppx	Synpcc7942_1965	0.50	-2.6
2,036,576	+	ppx	Synpcc7942_1965	0.51	-2.6
2,036,635	+	ppx	Synpcc7942_1965	0.55	-3.0
2,036,643	-	ppx	Synpcc7942_1965	0.55	-0.6
2,036,651	+	ppx	Synpcc7942_1965	0.56	-3.9
2,036,682	+	ppx	Synpcc7942_1965	0.58	-3.6
2,036,699	+	ppx	Synpcc7942_1965	0.59	-1.2
2,036,704	+	ppx	Synpcc7942_1965	0.59	-2.6
2,036,724	+	ppx	Synpcc7942_1965	0.60	-0.6
2,036,724	+	ppx	Synpcc7942_1965	0.60	-0.6
2,036,724	+	ppx	Synpcc7942_1965	0.60	-1.9
2,036,732	-	ppx	Synpcc7942_1965	0.61	+1.4
2,036,773	+	ppx	Synpcc7942_1965	0.63	-1.5
2,036,780	+	ppx	Synpcc7942_1965	0.64	-1.2
2,036,780	+	ppx	Synpcc7942_1965	0.64	-3.3
2,036,780	+	ppx	Synpcc7942_1965	0.64	-3.0
2,036,780	+	ppx	Synpcc7942_1965	0.64	-0.6
2,036,780	+	ppx	Synpcc7942_1965	0.64	-2.9
2,036,780	+	ppx	Synpcc7942_1965	0.64	-2.2
2,036,788	-	ppx	Synpcc7942_1965	0.64	-1.2
2,036,788	-	ppx	Synpcc7942_1965	0.64	-2.2
2,036,788	-	ppx	Synpcc7942_1965	0.64	+0.4
2,036,823	-	ppx	Synpcc7942_1965	0.66	-1.2
2,036,844	+	ppx	Synpcc7942_1965	0.68	-1.2
2,036,866	-	ppx	Synpcc7942_1965	0.69	-3.8
2,036,873	+	ppx	Synpcc7942_1965	0.69	-1.6
2,036,881	+	ppx	Synpcc7942_1965	0.70	-1.2
2,036,881	-	ppx	Synpcc7942_1965	0.70	-1.9
2,036,881	-	ppx	Synpcc7942_1965	0.70	-0.2
2,036,900	+	ppx	Synpcc7942_1965	0.71	-2.6
2,036,908	+	ppx	Synpcc7942_1965	0.71	-1.6
2,036,914	-	ppx	Synpcc7942_1965	0.72	-0.4
2,036,916	-	ppx	Synpcc7942_1965	0.72	-0.2
2,036,916	-	ppx	Synpcc7942_1965	0.72	-5.2
2,036,916	-	ppx	Synpcc7942_1965	0.72	-1.6
2,036,971	-	ppx	Synpcc7942_1965	0.75	-3.0
2,037,002	+	ppx	Synpcc7942_1965	0.77	+1.7
2,037,066	-	ppx	Synpcc7942_1965	0.81	-1.6
2,037,108	+	ppx	Synpcc7942_1965	0.84	-1.2
2,037,108	+	ppx	Synpcc7942_1965	0.84	-0.3
2,037,116	-	ppx	Synpcc7942_1965	0.84	-2.6
2,037,126	+	ppx	Synpcc7942_1965	0.85	-1.9
2,037,164	-	ppx	Synpcc7942_1965	0.87	-0.6
2,037,200	+	ppx	Synpcc7942_1965	0.89	-2.6
2,037,248	+				-1.2
2,037,263	+				-2.2
2,037,263	+				-1.9
2,037,263	+				+0.8
2,037,291	+				-0.8
2,037,311	+				-3.1
2,037,342	+				-1.2
2,037,364	+				-1.4
2,037,372	-				-1.3
2,037,374	+				-1.6
2,037,377	-				+1.3
2,037,382	-				-0.6
2,037,390	-				+2.7
2,037,410	+				+1.1
2,037,416	-				+0.9
2,037,422	+				-2.3
2,037,423	-				+1.2
2,037,424	-				+2.7
2,037,440	-		Synpcc7942_1966	0.10	-0.4
2,037,468	+				+0.4
2,037,476	-		Synpcc7942_1966	0.24	-1.2
2,037,643	+		Synpcc7942_1966	0.89	-1.9
2,037,651	-				-0.6
2,037,651	-				+4.5
2,037,701	-				+1.4
2,037,777	-				-2.2
2,037,791	-				-1.6