Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1859

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
1,927,679	+				+0.7
1,927,679	+				-1.6
1,927,687	-				-3.4
1,927,687	-				+1.4
1,927,725	+				+1.2
1,927,733	-				-1.9
1,927,740	+				-1.9
1,927,752	+				-1.6
1,927,815	-				+2.6
1,927,815	-				-1.2
1,927,815	-				+0.4
1,927,842	-				-1.9
1,927,855	-				-3.2
1,927,864	+				-2.4
1,927,864	+				-1.9
1,927,881	-				+1.2
1,927,881	-				+1.3
1,927,889	+				+0.8
1,927,907	-				+0.4
1,927,965	-				+1.0
1,927,980	-				-1.6
1,928,022	-		Synpcc7942_1859	0.10	+0.8
1,928,031	+		Synpcc7942_1859	0.11	-0.6
1,928,076	-		Synpcc7942_1859	0.12	+2.5
1,928,076	-		Synpcc7942_1859	0.12	+0.1
1,928,159	-		Synpcc7942_1859	0.15	+1.3
1,928,159	-		Synpcc7942_1859	0.15	+1.8
1,928,225	+		Synpcc7942_1859	0.18	-1.4
1,928,300	+		Synpcc7942_1859	0.21	-1.2
1,928,306	-		Synpcc7942_1859	0.21	-1.9
1,928,307	-		Synpcc7942_1859	0.21	+0.0
1,928,307	-		Synpcc7942_1859	0.21	+0.4
1,928,308	-		Synpcc7942_1859	0.21	-0.2
1,928,408	-		Synpcc7942_1859	0.25	+1.3
1,928,424	+		Synpcc7942_1859	0.25	-1.9
1,928,431	+		Synpcc7942_1859	0.25	+0.8
1,928,573	-		Synpcc7942_1859	0.31	+0.4
1,928,573	-				+0.4
1,928,573	-		Synpcc7942_1859	0.31	-0.6
1,928,592	-		Synpcc7942_1859	0.31	+0.5
1,928,655	-		Synpcc7942_1859	0.33	-1.3
1,928,677	-		Synpcc7942_1859	0.34	-0.7
1,928,677	-		Synpcc7942_1859	0.34	-0.1
1,928,735	-		Synpcc7942_1859	0.36	-1.1
1,928,774	+		Synpcc7942_1859	0.38	-0.4
1,928,905	+		Synpcc7942_1859	0.43	+0.4
1,928,919	-		Synpcc7942_1859	0.43	-2.4
1,928,999	-		Synpcc7942_1859	0.46	+0.5
1,929,004	+		Synpcc7942_1859	0.46	+0.4
1,929,110	-		Synpcc7942_1859	0.50	+2.0
1,929,254	+				-0.9
1,929,265	+		Synpcc7942_1859	0.56	-1.8
1,929,348	+		Synpcc7942_1859	0.59	-0.4
1,929,555	+		Synpcc7942_1859	0.66	-0.3
1,929,563	-		Synpcc7942_1859	0.66	-1.2
1,929,599	-		Synpcc7942_1859	0.68	+1.1
1,929,636	-		Synpcc7942_1859	0.69	-2.2
1,929,636	-		Synpcc7942_1859	0.69	+2.0
1,929,700	-		Synpcc7942_1859	0.71	+1.8
1,929,732	+		Synpcc7942_1859	0.73	-1.6
1,929,740	-		Synpcc7942_1859	0.73	-2.0
1,929,740	-		Synpcc7942_1859	0.73	-1.6
1,929,745	-		Synpcc7942_1859	0.73	-0.6
1,929,802	+		Synpcc7942_1859	0.75	+1.0
1,929,812	+		Synpcc7942_1859	0.75	-1.4
1,929,823	+		Synpcc7942_1859	0.76	+1.8
1,929,831	-		Synpcc7942_1859	0.76	+0.4
1,929,859	+		Synpcc7942_1859	0.77	+0.4
1,929,927	+		Synpcc7942_1859	0.80	-1.2
1,929,993	-		Synpcc7942_1859	0.82	+0.1
1,930,016	-		Synpcc7942_1859	0.83	+1.6
1,930,068	+		Synpcc7942_1859	0.85	+3.1
1,930,097	-		Synpcc7942_1859	0.86	+1.7
1,930,166	+		Synpcc7942_1859	0.88	-0.2
1,930,193	+		Synpcc7942_1859	0.89	+0.4
1,930,201	-		Synpcc7942_1859	0.90	+1.4
1,930,257	-				+0.3
1,930,315	+				-0.3
1,930,318	-				+1.8
1,930,353	+				+2.3
1,930,418	-				-1.6
1,930,478	+				+0.3
1,931,194	+				+1.4
1,931,194	+				+0.2
1,931,196	+				-2.2
1,931,200	-				+2.8
1,931,202	-				+0.3
1,931,233	-				+2.6
1,931,241	+				-0.6
1,931,248	-				+0.4
1,931,248	-				+1.6
1,931,248	-				+0.5
1,931,248	-				+0.5
1,931,260	-				+0.4
1,931,279	+				-2.4
1,931,281	-				+0.0
1,931,287	-				-0.6
1,931,293	-				-1.9
1,931,298	+				-1.8
1,931,306	-				-2.0
1,931,320	+				+1.1
1,931,350	-				-0.9
1,931,350	-				-1.4
1,931,364	-				+0.6
1,931,364	-				-0.6
1,931,398	+				+0.3
1,931,407	-				-1.6
1,931,417	-				-1.6
1,931,464	-				+1.6
1,931,464	-				+3.0
1,931,484	+	natB	Synpcc7942_1861	0.11	-1.6