Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1414

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
1,464,719	-		Synpcc7942_1412	0.78	+0.5
1,464,719	-		Synpcc7942_1412	0.78	-1.7
1,464,735	+		Synpcc7942_1412	0.82	-3.4
1,464,780	+				-1.7
1,464,813	+				-0.1
1,464,821	-				-0.2
1,464,831	-				-4.3
1,464,857	-				-3.6
1,464,857	-				-1.8
1,464,857	-				-1.1
1,464,871	+				+4.4
1,464,871	+				+1.6
1,464,879	-				+0.7
1,464,881	+				-0.7
1,464,905	-				+0.1
1,464,906	+				-0.6
1,464,907	+				+1.6
1,464,925	-				-1.3
1,465,007	+				+0.7
1,465,010	+				-0.5
1,465,027	-		Synpcc7942_1413	0.11	-1.1
1,465,035	+		Synpcc7942_1413	0.12	-2.3
1,465,035	+		Synpcc7942_1413	0.12	+4.1
1,465,043	-				+0.5
1,465,052	+		Synpcc7942_1413	0.15	-1.5
1,465,090	-		Synpcc7942_1413	0.20	-0.5
1,465,092	+		Synpcc7942_1413	0.20	-2.1
1,465,157	-		Synpcc7942_1413	0.29	-1.1
1,465,163	+		Synpcc7942_1413	0.29	+0.5
1,465,179	-		Synpcc7942_1413	0.31	+0.5
1,465,181	+		Synpcc7942_1413	0.32	+2.3
1,465,223	+		Synpcc7942_1413	0.37	-1.1
1,465,264	-		Synpcc7942_1413	0.43	+0.6
1,465,315	+		Synpcc7942_1413	0.49	+0.5
1,465,315	+				+0.5
1,465,315	+				-0.5
1,465,329	+		Synpcc7942_1413	0.51	+1.5
1,465,338	-		Synpcc7942_1413	0.53	+1.1
1,465,349	-		Synpcc7942_1413	0.54	-0.5
1,465,351	+		Synpcc7942_1413	0.54	-0.3
1,465,359	-		Synpcc7942_1413	0.55	+2.1
1,465,369	-		Synpcc7942_1413	0.57	+0.0
1,465,387	+		Synpcc7942_1413	0.59	+1.4
1,465,387	+		Synpcc7942_1413	0.59	+1.0
1,465,447	+		Synpcc7942_1413	0.67	+0.6
1,465,460	+		Synpcc7942_1413	0.69	+0.0
1,465,497	+		Synpcc7942_1413	0.74	-0.9
1,465,502	+		Synpcc7942_1413	0.74	-1.0
1,465,502	+		Synpcc7942_1413	0.74	+0.6
1,465,502	+		Synpcc7942_1413	0.74	+1.9
1,465,512	+				+0.5
1,465,512	+				-1.1
1,465,529	+		Synpcc7942_1413	0.78	-1.8
1,465,541	+		Synpcc7942_1413	0.79	+0.2
1,465,567	-		Synpcc7942_1413	0.83	-2.7
1,465,576	-		Synpcc7942_1413	0.84	-1.7
1,465,625	+				+0.9
1,465,664	-				+0.1
1,465,682	+				-2.1
1,465,691	-				-1.1
1,465,707	+				+2.6
1,465,715	-				-0.5
1,465,768	-				-2.3
1,465,775	+				-2.1
1,465,807	-		Synpcc7942_1414	0.13	-1.3
1,465,843	-		Synpcc7942_1414	0.18	-3.7
1,465,910	+		Synpcc7942_1414	0.28	-2.5
1,465,920	-		Synpcc7942_1414	0.29	-1.8
1,465,925	+		Synpcc7942_1414	0.30	-2.3
1,465,933	-		Synpcc7942_1414	0.31	-1.5
1,465,933	-		Synpcc7942_1414	0.31	-1.7
1,465,955	+		Synpcc7942_1414	0.34	-1.1
1,465,967	+		Synpcc7942_1414	0.36	+0.1
1,465,980	+		Synpcc7942_1414	0.37	-1.2
1,465,988	-		Synpcc7942_1414	0.38	-1.1
1,466,021	-		Synpcc7942_1414	0.43	-1.1
1,466,031	-		Synpcc7942_1414	0.44	-3.0
1,466,033	+		Synpcc7942_1414	0.45	-2.1
1,466,041	-		Synpcc7942_1414	0.46	-2.8
1,466,120	+		Synpcc7942_1414	0.57	-2.7
1,466,124	-		Synpcc7942_1414	0.57	-4.4
1,466,189	+		Synpcc7942_1414	0.66	-3.8
1,466,231	-		Synpcc7942_1414	0.72	-2.7
1,466,246	-		Synpcc7942_1414	0.74	-0.5
1,466,300	+		Synpcc7942_1414	0.81	-2.7
1,466,323	-		Synpcc7942_1414	0.85	+0.5
1,466,356	-		Synpcc7942_1414	0.89	-3.5
1,466,356	-		Synpcc7942_1414	0.89	-1.1
1,466,366	+				-0.2
1,466,410	-				-4.3
1,466,490	-				-3.0
1,466,492	-				-1.1
1,466,493	+				-0.1
1,466,493	+				-0.6
1,466,498	+				+0.6
1,466,642	+				-3.7
1,466,644	+				-2.8
1,466,650	-				-2.1