Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1297

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
1,321,942	+				-1.1
1,321,950	-				+0.9
1,322,013	-		Synpcc7942_1296	0.17	-1.2
1,322,060	+		Synpcc7942_1296	0.23	+2.5
1,322,060	+		Synpcc7942_1296	0.23	-2.8
1,322,060	+		Synpcc7942_1296	0.23	+0.5
1,322,118	-		Synpcc7942_1296	0.32	-3.4
1,322,143	-		Synpcc7942_1296	0.35	-0.5
1,322,149	+		Synpcc7942_1296	0.36	-0.3
1,322,211	+		Synpcc7942_1296	0.45	+1.7
1,322,211	+		Synpcc7942_1296	0.45	-0.3
1,322,219	+		Synpcc7942_1296	0.46	-2.8
1,322,219	-		Synpcc7942_1296	0.46	+2.3
1,322,231	+		Synpcc7942_1296	0.48	-0.5
1,322,237	+		Synpcc7942_1296	0.49	+2.5
1,322,252	+		Synpcc7942_1296	0.51	-0.6
1,322,267	-		Synpcc7942_1296	0.53	-0.3
1,322,276	-		Synpcc7942_1296	0.54	-1.5
1,322,337	+				-1.1
1,322,341	+		Synpcc7942_1296	0.64	+2.1
1,322,345	-		Synpcc7942_1296	0.64	-2.1
1,322,348	+		Synpcc7942_1296	0.65	-1.3
1,322,374	-		Synpcc7942_1296	0.68	-2.5
1,322,394	+		Synpcc7942_1296	0.71	+1.7
1,322,397	-		Synpcc7942_1296	0.72	+1.8
1,322,421	-		Synpcc7942_1296	0.75	-0.5
1,322,442	+		Synpcc7942_1296	0.78	+3.0
1,322,442	+		Synpcc7942_1296	0.78	+0.7
1,322,442	+		Synpcc7942_1296	0.78	+2.8
1,322,450	-		Synpcc7942_1296	0.79	+2.1
1,322,456	-		Synpcc7942_1296	0.80	-1.1
1,322,474	+		Synpcc7942_1296	0.83	+0.6
1,322,474	+		Synpcc7942_1296	0.83	-1.2
1,322,482	-		Synpcc7942_1296	0.84	-1.8
1,322,482	-		Synpcc7942_1296	0.84	-1.1
1,322,496	+		Synpcc7942_1296	0.86	-1.0
1,322,496	+		Synpcc7942_1296	0.86	+1.4
1,322,496	+		Synpcc7942_1296	0.86	-0.1
1,322,501	+		Synpcc7942_1296	0.87	+0.1
1,322,503	+		Synpcc7942_1296	0.87	+0.8
1,322,504	-		Synpcc7942_1296	0.87	-0.5
1,322,504	-		Synpcc7942_1296	0.87	+2.1
1,322,504	-		Synpcc7942_1296	0.87	+1.9
1,322,504	-		Synpcc7942_1296	0.87	+2.3
1,322,504	-		Synpcc7942_1296	0.87	-1.8
1,322,504	-		Synpcc7942_1296	0.87	-0.5
1,322,509	-		Synpcc7942_1296	0.88	-0.9
1,322,509	-		Synpcc7942_1296	0.88	+1.9
1,322,582	+				-1.5
1,322,585	-				+1.7
1,322,618	-				+1.5
1,322,642	+				-2.5
1,322,656	+				+0.3
1,322,656	+				-0.9
1,322,664	-				+0.5
1,322,666	+				+0.1
1,322,666	+				-0.5
1,322,674	-				-1.5
1,322,674	-				-0.1
1,322,703	+				+0.5
1,322,868	+				-1.5
1,322,868	+				+3.1
1,322,868	+				-1.8
1,322,868	+				-0.5
1,322,868	+				-2.1
1,322,873	+				-1.5
1,322,876	-				-2.3
1,322,876	-				+1.8
1,322,876	-				-1.5
1,322,907	-				-2.1
1,322,914	+				-2.5
1,322,914	+				-1.7
1,322,982	+				-0.5
1,323,060	-		Synpcc7942_1297	0.11	+0.8
1,323,097	+		Synpcc7942_1297	0.13	-1.7
1,323,105	-		Synpcc7942_1297	0.14	+0.5
1,323,105	-		Synpcc7942_1297	0.14	-1.5
1,323,107	-		Synpcc7942_1297	0.14	-0.5
1,323,180	+		Synpcc7942_1297	0.19	-1.5
1,323,183	-		Synpcc7942_1297	0.19	-1.5
1,323,193	-		Synpcc7942_1297	0.20	-1.1
1,323,232	+		Synpcc7942_1297	0.23	-1.5
1,323,244	-		Synpcc7942_1297	0.24	-2.3
1,323,285	-		Synpcc7942_1297	0.27	-1.8
1,323,324	-		Synpcc7942_1297	0.29	-2.1
1,323,431	+		Synpcc7942_1297	0.37	-2.3
1,323,458	-		Synpcc7942_1297	0.39	-2.3
1,323,519	+		Synpcc7942_1297	0.43	-0.5
1,323,605	-		Synpcc7942_1297	0.49	-0.5
1,323,670	+		Synpcc7942_1297	0.54	-0.5
1,323,735	+		Synpcc7942_1297	0.59	-1.1
1,323,748	-				-1.1
1,323,869	+		Synpcc7942_1297	0.68	-1.1
1,323,890	-		Synpcc7942_1297	0.70	+3.1
1,323,983	+				-0.1
1,323,991	-		Synpcc7942_1297	0.77	-0.1
1,324,020	-		Synpcc7942_1297	0.79	-1.1
1,324,078	-		Synpcc7942_1297	0.83	-2.3
1,324,088	-				-0.5
1,324,095	+		Synpcc7942_1297	0.84	-2.1
1,324,103	-		Synpcc7942_1297	0.85	+0.8
1,324,118	-		Synpcc7942_1297	0.86	-1.1
1,324,171	+		Synpcc7942_1297	0.89	-3.7
1,324,195	+				-1.5
1,324,300	+				-0.5
1,324,308	-				-0.6
1,324,329	-				+1.1
1,324,334	-				-0.2
1,324,360	-				+2.6
1,324,411	-				+0.3
1,324,413	+				-1.5
1,324,420	-				+0.6
1,324,420	-				-1.5
1,324,420	-				+0.8
1,324,420	-				-0.2
1,324,470	+				-2.1
1,324,478	-				+0.9
1,324,486	+				-2.5
1,324,498	-				-3.5
1,324,517	+				-3.3
1,324,603	+				+0.5
1,324,607	-				-1.8
1,324,612	-				-0.2
1,324,612	-				-0.2
1,324,898	-				+0.1
1,324,905	+				-1.5
1,325,025	+				-1.4
1,325,097	-				-2.2
1,325,135	+				+0.5
1,325,165	+				+1.5
1,325,180	+				+1.5
1,325,181	+				-1.0
1,325,236	+				+2.3
1,325,244	-				-1.0
1,325,244	-				-0.1
1,325,244	-				-1.0
1,325,259	-				+0.7
1,325,278	-				+2.9
1,325,278	-				+2.8
1,325,318	+		Synpcc7942_1298	0.12	-0.0
1,325,318	+		Synpcc7942_1298	0.12	-0.9