Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1296

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
1,320,930	+		Synpcc7942_1295	0.40	-2.8
1,320,931	-		Synpcc7942_1295	0.40	-1.1
1,320,938	-		Synpcc7942_1295	0.41	+0.8
1,320,938	-		Synpcc7942_1295	0.41	+1.9
1,320,938	-		Synpcc7942_1295	0.41	+1.3
1,320,938	-		Synpcc7942_1295	0.41	+0.4
1,320,938	-		Synpcc7942_1295	0.41	-1.1
1,320,943	+		Synpcc7942_1295	0.41	+2.1
1,320,974	+		Synpcc7942_1295	0.43	+0.7
1,321,010	+		Synpcc7942_1295	0.46	-0.2
1,321,045	+		Synpcc7942_1295	0.49	-0.2
1,321,054	-		Synpcc7942_1295	0.49	+1.6
1,321,054	-		Synpcc7942_1295	0.49	-0.5
1,321,054	-		Synpcc7942_1295	0.49	+1.5
1,321,062	+		Synpcc7942_1295	0.50	+1.8
1,321,062	+		Synpcc7942_1295	0.50	-0.5
1,321,070	-		Synpcc7942_1295	0.50	+2.4
1,321,070	-		Synpcc7942_1295	0.50	-1.8
1,321,071	-		Synpcc7942_1295	0.50	+0.7
1,321,071	-		Synpcc7942_1295	0.50	+0.7
1,321,074	+		Synpcc7942_1295	0.51	+0.5
1,321,077	-		Synpcc7942_1295	0.51	-1.9
1,321,083	-		Synpcc7942_1295	0.51	+6.3
1,321,130	+		Synpcc7942_1295	0.55	+1.8
1,321,130	+		Synpcc7942_1295	0.55	-1.2
1,321,138	-		Synpcc7942_1295	0.55	-2.5
1,321,161	-		Synpcc7942_1295	0.57	-2.3
1,321,161	-		Synpcc7942_1295	0.57	+0.2
1,321,164	+		Synpcc7942_1295	0.57	+1.3
1,321,188	+		Synpcc7942_1295	0.59	+0.6
1,321,196	-		Synpcc7942_1295	0.59	-1.5
1,321,262	-		Synpcc7942_1295	0.64	-0.3
1,321,269	+		Synpcc7942_1295	0.65	+0.8
1,321,322	+		Synpcc7942_1295	0.69	+1.0
1,321,330	-		Synpcc7942_1295	0.69	-0.2
1,321,332	-		Synpcc7942_1295	0.69	+0.5
1,321,334	+		Synpcc7942_1295	0.69	-1.1
1,321,356	+		Synpcc7942_1295	0.71	+1.2
1,321,356	+		Synpcc7942_1295	0.71	+2.2
1,321,356	+		Synpcc7942_1295	0.71	+0.2
1,321,364	-				-0.5
1,321,390	+		Synpcc7942_1295	0.73	-0.1
1,321,399	-		Synpcc7942_1295	0.74	-1.5
1,321,399	-		Synpcc7942_1295	0.74	+0.6
1,321,411	+		Synpcc7942_1295	0.75	-0.5
1,321,414	-		Synpcc7942_1295	0.75	-1.1
1,321,414	-		Synpcc7942_1295	0.75	+1.5
1,321,454	-		Synpcc7942_1295	0.78	-0.1
1,321,456	+				-0.5
1,321,513	+		Synpcc7942_1295	0.82	-0.2
1,321,526	-		Synpcc7942_1295	0.83	+0.5
1,321,528	+		Synpcc7942_1295	0.83	+1.4
1,321,578	+		Synpcc7942_1295	0.87	-0.5
1,321,591	+		Synpcc7942_1295	0.88	-0.9
1,321,616	+		Synpcc7942_1295	0.90	+3.8
1,321,670	+				+0.6
1,321,670	+				+3.1
1,321,694	+				-0.2
1,321,696	-				-1.6
1,321,696	-				+1.0
1,321,696	-				-1.1
1,321,700	+				+1.0
1,321,702	-				-2.3
1,321,702	-				+0.5
1,321,703	-				-0.3
1,321,725	-				-1.6
1,321,735	-				-1.7
1,321,747	+				+1.8
1,321,755	-				+0.2
1,321,755	-				+0.9
1,321,755	-				+0.5
1,321,755	-				-2.3
1,321,755	-				+3.1
1,321,755	-				-1.1
1,321,762	-				+1.8
1,321,790	+				+0.1
1,321,799	+				-3.1
1,321,801	+				+0.8
1,321,821	-				+1.3
1,321,848	+				+1.1
1,321,856	-				-2.8
1,321,868	-				+1.8
1,321,942	+				-1.1
1,321,950	-				+0.9
1,322,013	-		Synpcc7942_1296	0.17	-1.2
1,322,060	+		Synpcc7942_1296	0.23	+2.5
1,322,060	+		Synpcc7942_1296	0.23	-2.8
1,322,060	+		Synpcc7942_1296	0.23	+0.5
1,322,118	-		Synpcc7942_1296	0.32	-3.4
1,322,143	-		Synpcc7942_1296	0.35	-0.5
1,322,149	+		Synpcc7942_1296	0.36	-0.3
1,322,211	+		Synpcc7942_1296	0.45	+1.7
1,322,211	+		Synpcc7942_1296	0.45	-0.3
1,322,219	+		Synpcc7942_1296	0.46	-2.8
1,322,219	-		Synpcc7942_1296	0.46	+2.3
1,322,231	+		Synpcc7942_1296	0.48	-0.5
1,322,237	+		Synpcc7942_1296	0.49	+2.5
1,322,252	+		Synpcc7942_1296	0.51	-0.6
1,322,267	-		Synpcc7942_1296	0.53	-0.3
1,322,276	-		Synpcc7942_1296	0.54	-1.5
1,322,337	+				-1.1
1,322,341	+		Synpcc7942_1296	0.64	+2.1
1,322,345	-		Synpcc7942_1296	0.64	-2.1
1,322,348	+		Synpcc7942_1296	0.65	-1.3
1,322,374	-		Synpcc7942_1296	0.68	-2.5
1,322,394	+		Synpcc7942_1296	0.71	+1.7
1,322,397	-		Synpcc7942_1296	0.72	+1.8
1,322,421	-		Synpcc7942_1296	0.75	-0.5
1,322,442	+		Synpcc7942_1296	0.78	+3.0
1,322,442	+		Synpcc7942_1296	0.78	+0.7
1,322,442	+		Synpcc7942_1296	0.78	+2.8
1,322,450	-		Synpcc7942_1296	0.79	+2.1
1,322,456	-		Synpcc7942_1296	0.80	-1.1
1,322,474	+		Synpcc7942_1296	0.83	+0.6
1,322,474	+		Synpcc7942_1296	0.83	-1.2
1,322,482	-		Synpcc7942_1296	0.84	-1.8
1,322,482	-		Synpcc7942_1296	0.84	-1.1
1,322,496	+		Synpcc7942_1296	0.86	-1.0
1,322,496	+		Synpcc7942_1296	0.86	+1.4
1,322,496	+		Synpcc7942_1296	0.86	-0.1
1,322,501	+		Synpcc7942_1296	0.87	+0.1
1,322,503	+		Synpcc7942_1296	0.87	+0.8
1,322,504	-		Synpcc7942_1296	0.87	-0.5
1,322,504	-		Synpcc7942_1296	0.87	+2.1
1,322,504	-		Synpcc7942_1296	0.87	+1.9
1,322,504	-		Synpcc7942_1296	0.87	+2.3
1,322,504	-		Synpcc7942_1296	0.87	-1.8
1,322,504	-		Synpcc7942_1296	0.87	-0.5
1,322,509	-		Synpcc7942_1296	0.88	-0.9
1,322,509	-		Synpcc7942_1296	0.88	+1.9
1,322,582	+				-1.5
1,322,585	-				+1.7
1,322,618	-				+1.5
1,322,642	+				-2.5
1,322,656	+				+0.3
1,322,656	+				-0.9
1,322,664	-				+0.5
1,322,666	+				+0.1
1,322,666	+				-0.5
1,322,674	-				-1.5
1,322,674	-				-0.1
1,322,703	+				+0.5
1,322,868	+				-1.5
1,322,868	+				+3.1
1,322,868	+				-1.8
1,322,868	+				-0.5
1,322,868	+				-2.1
1,322,873	+				-1.5
1,322,876	-				-2.3
1,322,876	-				+1.8
1,322,876	-				-1.5
1,322,907	-				-2.1
1,322,914	+				-2.5
1,322,914	+				-1.7
1,322,982	+				-0.5
1,323,060	-		Synpcc7942_1297	0.11	+0.8
1,323,097	+		Synpcc7942_1297	0.13	-1.7
1,323,105	-		Synpcc7942_1297	0.14	+0.5
1,323,105	-		Synpcc7942_1297	0.14	-1.5
1,323,107	-		Synpcc7942_1297	0.14	-0.5
1,323,180	+		Synpcc7942_1297	0.19	-1.5
1,323,183	-		Synpcc7942_1297	0.19	-1.5
1,323,193	-		Synpcc7942_1297	0.20	-1.1
1,323,232	+		Synpcc7942_1297	0.23	-1.5
1,323,244	-		Synpcc7942_1297	0.24	-2.3
1,323,285	-		Synpcc7942_1297	0.27	-1.8
1,323,324	-		Synpcc7942_1297	0.29	-2.1
1,323,431	+		Synpcc7942_1297	0.37	-2.3
1,323,458	-		Synpcc7942_1297	0.39	-2.3
1,323,519	+		Synpcc7942_1297	0.43	-0.5