Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1168

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
1,200,492	-		Synpcc7942_1166	0.80	-1.4
1,200,507	+		Synpcc7942_1166	0.81	+0.4
1,200,512	+		Synpcc7942_1166	0.81	+1.0
1,200,562	+		Synpcc7942_1166	0.85	+1.4
1,200,568	+		Synpcc7942_1166	0.85	-0.4
1,200,573	+		Synpcc7942_1166	0.86	+1.3
1,200,693	+				+0.5
1,200,719	-				+0.5
1,200,719	-				-0.9
1,200,729	-				-0.3
1,200,738	+				+0.5
1,200,759	+				-0.4
1,200,882	+		Synpcc7942_1167	0.20	-1.4
1,200,882	+		Synpcc7942_1167	0.20	-2.5
1,200,885	-		Synpcc7942_1167	0.20	+1.0
1,200,890	-		Synpcc7942_1167	0.21	+2.5
1,200,890	-		Synpcc7942_1167	0.21	+0.5
1,200,920	+		Synpcc7942_1167	0.26	+3.5
1,200,921	+		Synpcc7942_1167	0.27	-0.1
1,200,933	+		Synpcc7942_1167	0.29	+0.8
1,200,933	+		Synpcc7942_1167	0.29	-2.1
1,200,933	+		Synpcc7942_1167	0.29	+1.5
1,200,933	+		Synpcc7942_1167	0.29	-1.5
1,200,952	+		Synpcc7942_1167	0.32	+0.6
1,200,989	+		Synpcc7942_1167	0.39	+0.5
1,201,002	+		Synpcc7942_1167	0.41	+3.2
1,201,023	-		Synpcc7942_1167	0.45	-2.5
1,201,034	+		Synpcc7942_1167	0.47	+0.7
1,201,035	-		Synpcc7942_1167	0.47	+2.3
1,201,039	+		Synpcc7942_1167	0.48	+0.9
1,201,042	-		Synpcc7942_1167	0.48	+1.9
1,201,042	-		Synpcc7942_1167	0.48	+1.8
1,201,057	+		Synpcc7942_1167	0.51	+0.5
1,201,059	+		Synpcc7942_1167	0.51	+0.0
1,201,067	+		Synpcc7942_1167	0.53	+0.6
1,201,067	+				+0.5
1,201,075	-		Synpcc7942_1167	0.54	+0.6
1,201,080	-		Synpcc7942_1167	0.55	-0.5
1,201,097	+		Synpcc7942_1167	0.58	+0.3
1,201,138	+		Synpcc7942_1167	0.65	+2.7
1,201,247	-		Synpcc7942_1167	0.85	+3.0
1,201,278	-				+1.5
1,201,318	+				-0.1
1,201,325	+				-0.1
1,201,326	-				-1.4
1,201,419	+	cpmA	Synpcc7942_1168	0.12	-1.6
1,201,541	+	cpmA	Synpcc7942_1168	0.27	-2.6
1,201,549	-	cpmA	Synpcc7942_1168	0.28	-2.1
1,201,624	+	cpmA	Synpcc7942_1168	0.38	+0.4
1,202,031	+				-1.6
1,202,032	+				-0.3
1,202,083	+				+0.4
1,202,083	+				+0.2
1,202,112	+				+0.9
1,202,150	+				+0.8
1,202,156	-				-0.9
1,202,170	-				+1.3
1,202,173	+				+1.5
1,202,181	-				+2.0
1,202,191	-				-0.6
1,202,191	-				-1.9
1,202,191	-				-1.6
1,202,218	+				-1.3
1,202,237	-				+0.4
1,202,469	-		Synpcc7942_1169	0.21	+2.0
1,202,481	-		Synpcc7942_1169	0.21	+2.6
1,202,538	-		Synpcc7942_1169	0.25	+0.7
1,202,538	-		Synpcc7942_1169	0.25	-1.6
1,202,538	-		Synpcc7942_1169	0.25	-1.1
1,202,568	+		Synpcc7942_1169	0.26	-0.0
1,202,568	+		Synpcc7942_1169	0.26	-2.7
1,202,576	-		Synpcc7942_1169	0.27	+0.7
1,202,608	+		Synpcc7942_1169	0.29	-1.1
1,202,625	+		Synpcc7942_1169	0.30	+0.9
1,202,640	-		Synpcc7942_1169	0.30	+0.4
1,202,642	+		Synpcc7942_1169	0.31	-2.4
1,202,650	-		Synpcc7942_1169	0.31	-0.6
1,202,666	+		Synpcc7942_1169	0.32	-1.6
1,202,726	+		Synpcc7942_1169	0.35	-1.9
1,202,726	+		Synpcc7942_1169	0.35	-2.7
1,202,797	-		Synpcc7942_1169	0.39	+0.9
1,202,802	-		Synpcc7942_1169	0.40	-2.1
1,202,802	-		Synpcc7942_1169	0.40	-0.9
1,202,913	+		Synpcc7942_1169	0.46	-3.3
1,202,920	-		Synpcc7942_1169	0.46	-1.1
1,202,968	+		Synpcc7942_1169	0.49	+0.1
1,202,968	+		Synpcc7942_1169	0.49	-0.9
1,202,979	+		Synpcc7942_1169	0.50	-1.9
1,202,979	+		Synpcc7942_1169	0.50	+1.9
1,202,979	+		Synpcc7942_1169	0.50	-0.9
1,202,979	+		Synpcc7942_1169	0.50	-0.6
1,202,979	+		Synpcc7942_1169	0.50	-1.1
1,202,979	+		Synpcc7942_1169	0.50	-0.6
1,202,987	-		Synpcc7942_1169	0.50	-0.8
1,203,085	+		Synpcc7942_1169	0.56	-1.3