Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0150

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
150,185	-				-2.1
150,191	-				+0.5
150,214	+				+0.1
150,224	-				-2.5
150,241	+				-1.5
150,258	-		Synpcc7942_0149	0.13	+2.3
150,265	+		Synpcc7942_0149	0.14	+0.0
150,275	-		Synpcc7942_0149	0.16	-1.5
150,330	+		Synpcc7942_0149	0.26	-1.1
150,338	-		Synpcc7942_0149	0.27	+0.4
150,341	+		Synpcc7942_0149	0.28	-2.7
150,341	+		Synpcc7942_0149	0.28	+0.5
150,341	+		Synpcc7942_0149	0.28	-0.5
150,341	+		Synpcc7942_0149	0.28	+0.3
150,341	+		Synpcc7942_0149	0.28	-0.1
150,341	+		Synpcc7942_0149	0.28	-2.3
150,349	-		Synpcc7942_0149	0.29	-0.2
150,349	-		Synpcc7942_0149	0.29	+1.8
150,349	-		Synpcc7942_0149	0.29	-2.1
150,349	-		Synpcc7942_0149	0.29	+0.2
150,349	-		Synpcc7942_0149	0.29	-0.5
150,349	-		Synpcc7942_0149	0.29	-0.7
150,349	-		Synpcc7942_0149	0.29	-0.5
150,349	-		Synpcc7942_0149	0.29	+0.8
150,349	-		Synpcc7942_0149	0.29	+0.6
150,349	-		Synpcc7942_0149	0.29	+1.0
150,349	-		Synpcc7942_0149	0.29	-1.2
150,365	+		Synpcc7942_0149	0.32	-2.1
150,378	-		Synpcc7942_0149	0.34	+1.1
150,378	-		Synpcc7942_0149	0.34	-2.1
150,392	+		Synpcc7942_0149	0.37	+0.5
150,435	+		Synpcc7942_0149	0.44	+2.1
150,440	+		Synpcc7942_0149	0.45	-1.8
150,464	-		Synpcc7942_0149	0.50	+0.5
150,465	+		Synpcc7942_0149	0.50	+0.5
150,487	+		Synpcc7942_0149	0.54	+0.2
150,649	+		Synpcc7942_0149	0.83	+0.2
150,664	-		Synpcc7942_0149	0.85	+2.2
150,671	-		Synpcc7942_0149	0.87	+0.5
150,679	-		Synpcc7942_0149	0.88	-1.8
150,699	+				+0.5
150,748	+				+1.5
150,796	-				-1.1
150,951	+		Synpcc7942_0150	0.17	-1.1
151,019	-		Synpcc7942_0150	0.23	-1.5
151,039	+		Synpcc7942_0150	0.25	-0.5
151,045	-		Synpcc7942_0150	0.25	-0.5
151,079	+		Synpcc7942_0150	0.28	-1.3
151,135	+		Synpcc7942_0150	0.33	-1.1
151,165	+		Synpcc7942_0150	0.35	-2.8
151,167	+		Synpcc7942_0150	0.36	-0.9
151,167	+		Synpcc7942_0150	0.36	+0.7
151,167	+		Synpcc7942_0150	0.36	+0.9
151,175	-		Synpcc7942_0150	0.36	-3.1
151,183	-		Synpcc7942_0150	0.37	-1.5
151,185	-		Synpcc7942_0150	0.37	-1.5
151,185	-		Synpcc7942_0150	0.37	-0.5
151,185	-		Synpcc7942_0150	0.37	-2.1
151,219	+		Synpcc7942_0150	0.40	-0.1
151,273	+		Synpcc7942_0150	0.45	-2.1
151,287	+		Synpcc7942_0150	0.46	-3.4
151,323	-		Synpcc7942_0150	0.49	-1.1
151,351	+		Synpcc7942_0150	0.51	-1.4
151,351	+		Synpcc7942_0150	0.51	-0.5
151,359	-		Synpcc7942_0150	0.52	+0.5
151,359	-		Synpcc7942_0150	0.52	-1.1
151,372	-		Synpcc7942_0150	0.53	-2.5
151,373	-		Synpcc7942_0150	0.53	+0.5
151,374	+		Synpcc7942_0150	0.53	-0.5
151,393	-		Synpcc7942_0150	0.55	-0.5
151,420	+		Synpcc7942_0150	0.57	-0.5
151,420	+		Synpcc7942_0150	0.57	-0.5
151,428	-		Synpcc7942_0150	0.58	-0.9
151,428	-		Synpcc7942_0150	0.58	+0.5
151,507	-		Synpcc7942_0150	0.65	-1.1
151,524	+		Synpcc7942_0150	0.66	-0.7
151,556	+		Synpcc7942_0150	0.69	-1.5
151,616	+		Synpcc7942_0150	0.74	-2.8
151,616	+		Synpcc7942_0150	0.74	-2.5
151,624	-		Synpcc7942_0150	0.75	-0.5
151,676	-		Synpcc7942_0150	0.79	+1.5
151,683	-		Synpcc7942_0150	0.80	-0.8
151,701	+		Synpcc7942_0150	0.81	+2.5
151,703	-		Synpcc7942_0150	0.81	-2.8
151,709	-		Synpcc7942_0150	0.82	-2.1
151,721	+		Synpcc7942_0150	0.83	-1.9
151,724	-		Synpcc7942_0150	0.83	-1.5
151,729	-		Synpcc7942_0150	0.84	-3.1
151,787	+		Synpcc7942_0150	0.89	-0.7
151,832	-				-1.2
151,933	+				+1.5
151,933	+				-2.1
151,941	-				+1.2
151,941	-				-1.4
151,957	+				-1.8
151,988	+				+1.3
151,988	+				-0.8
151,988	+				-0.5
151,996	-				+1.4
151,996	-				+2.1
151,996	-				-1.4
152,001	-				+0.2
152,017	+				+0.8
152,017	+				-1.1
152,017	+				-1.8
152,017	+				+1.5
152,017	+				-1.3
152,022	+				-0.6
152,022	+				-1.5
152,025	-				+0.5
152,035	-				-0.5
152,056	+				-0.2
152,064	-				-0.5
152,067	-				-0.5
152,071	+				+2.5
152,071	+				-0.4
152,097	+				+0.8
152,106	-				+3.0
152,112	-				-3.4
152,169	-				+0.9
152,169	-				+0.0
152,174	-				-0.5
152,178	+				-0.5
152,178	+				-2.1
152,212	+				+0.3
152,235	+				-0.3
152,325	+				+0.5
152,485	-				+0.1
152,498	+				+0.5
152,557	+				-1.1
152,575	-				-0.1
152,576	+				-1.1
152,624	+				-0.2
152,663	-				-0.2
152,691	-				+0.6
152,691	-				+0.8
152,732	+				-0.5
152,740	-				-0.1
152,740	-				+0.1
152,751	-				-0.8
152,752	-				+0.2
152,823	+	psfR	Synpcc7942_0151	0.12	+1.8
152,850	+	psfR	Synpcc7942_0151	0.14	-1.1
152,890	+	psfR	Synpcc7942_0151	0.15	+0.5
152,909	-	psfR	Synpcc7942_0151	0.16	-2.8