Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0118

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
116,040	+		Synpcc7942_0117	0.49	-2.5
116,268	-		Synpcc7942_0117	0.66	+0.7
116,279	-		Synpcc7942_0117	0.67	+1.4
116,280	-		Synpcc7942_0117	0.67	-1.3
116,439	-		Synpcc7942_0117	0.79	-0.5
116,520	+		Synpcc7942_0117	0.85	+1.3
116,576	-		Synpcc7942_0117	0.89	-0.5
116,685	+				+0.5
116,688	+				-2.9
116,770	+				-2.9
116,770	+				+2.6
116,770	+				-0.2
116,770	+				+0.5
116,770	+				+1.5
116,770	+				+1.2
116,778	-				-1.5
116,778	-				+1.6
116,778	-				-0.5
116,778	-				-1.6
116,778	-				+0.1
116,824	-				+1.7
116,897	+				+0.1
116,897	+				-2.9
116,902	+				-0.2
116,905	-				+0.2
116,905	-				+0.4
116,910	-				-3.2
118,422	+				+1.4
118,460	+				-3.6
118,460	+				-0.8
118,460	+				-0.5
118,460	+				+1.1
118,468	-				-1.8
118,479	+				+0.8
118,491	+				+0.5
118,535	-				-3.3
118,566	-				-1.5
118,570	+				-1.5
118,571	-				+1.2
118,575	+				-2.0
118,606	-				+1.5
118,608	+				+2.6
118,686	+				-0.1
118,734	+				+0.5
118,739	+				+0.5
118,740	-				+3.3
118,765	+				-1.5
118,783	-				+0.0
118,797	-		Synpcc7942_0119	0.11	-1.1
118,823	+		Synpcc7942_0119	0.16	-2.1
118,914	-		Synpcc7942_0119	0.32	-2.5
118,921	+		Synpcc7942_0119	0.33	+0.8
118,921	+		Synpcc7942_0119	0.33	+2.2
118,921	+				-0.5
118,921	+		Synpcc7942_0119	0.33	+0.5
118,943	-		Synpcc7942_0119	0.37	+1.5
118,948	+		Synpcc7942_0119	0.38	-0.5
118,948	-		Synpcc7942_0119	0.38	-0.2
118,951	-		Synpcc7942_0119	0.39	-3.7
118,956	-		Synpcc7942_0119	0.40	+0.1
118,957	+		Synpcc7942_0119	0.40	+0.7
118,965	-		Synpcc7942_0119	0.41	-0.5
118,965	-		Synpcc7942_0119	0.41	-1.2
118,965	-		Synpcc7942_0119	0.41	-2.5
118,978	-		Synpcc7942_0119	0.44	-0.5
118,993	+		Synpcc7942_0119	0.46	+0.3
118,993	+		Synpcc7942_0119	0.46	-0.1
119,071	-		Synpcc7942_0119	0.60	-3.4
119,071	-		Synpcc7942_0119	0.60	-1.5
119,080	+				-1.1
119,220	+		Synpcc7942_0119	0.87	+0.5
119,230	-		Synpcc7942_0119	0.89	-1.1
119,240	+				-1.8
119,375	+				-1.8
119,397	-				+1.5
119,401	+				-1.1
119,401	+				-1.6
119,408	+				+1.2
119,408	+				-1.1
119,408	+				-0.5
119,408	+				+3.0
119,408	+				-0.5
119,408	+				+0.2
119,408	+				-0.5
119,408	+				+0.5
119,408	+				-1.3
119,408	+				+1.1
119,408	+				+0.6
119,413	+				+0.5
119,416	-				+0.1
119,416	-				+1.9
119,416	-				+0.7
119,416	-				+0.5
119,416	-				-0.3
119,416	-				+1.0
119,416	-				+0.3
119,416	-				+0.7
119,416	-				+3.0
119,416	-				+0.7
119,416	-				+2.0
119,423	+				-0.8
119,423	+				-0.3