Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0080

Experiment: Rifampicin 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rifampicin 0.000390625 mg/ml
76,674	+		Synpcc7942_0078	0.13	+1.0
76,677	+		Synpcc7942_0078	0.14	+0.6
76,743	+		Synpcc7942_0078	0.29	-0.8
76,743	+		Synpcc7942_0078	0.29	-1.5
76,743	+		Synpcc7942_0078	0.29	-0.7
76,743	+		Synpcc7942_0078	0.29	-2.3
76,743	+		Synpcc7942_0078	0.29	+1.0
76,743	+		Synpcc7942_0078	0.29	+1.5
76,743	+				+2.5
76,743	+		Synpcc7942_0078	0.29	+0.3
76,743	+		Synpcc7942_0078	0.29	+1.1
76,751	-		Synpcc7942_0078	0.30	+2.2
76,751	-		Synpcc7942_0078	0.30	-1.8
76,751	-		Synpcc7942_0078	0.30	-1.5
76,751	-		Synpcc7942_0078	0.30	-1.7
76,751	-		Synpcc7942_0078	0.30	+2.6
76,751	-		Synpcc7942_0078	0.30	+1.1
76,751	-		Synpcc7942_0078	0.30	+0.7
76,751	-		Synpcc7942_0078	0.30	+3.2
76,756	-		Synpcc7942_0078	0.32	-1.5
76,770	+		Synpcc7942_0078	0.35	+0.8
76,775	+		Synpcc7942_0078	0.36	+1.7
76,775	+		Synpcc7942_0078	0.36	-1.1
76,775	+		Synpcc7942_0078	0.36	+0.9
76,783	-		Synpcc7942_0078	0.38	-0.8
76,796	+		Synpcc7942_0078	0.40	+1.7
76,796	+		Synpcc7942_0078	0.40	-1.5
76,797	+		Synpcc7942_0078	0.41	-0.5
76,886	+				+2.5
76,889	-		Synpcc7942_0078	0.61	-0.4
76,932	-		Synpcc7942_0078	0.71	-1.8
76,956	-		Synpcc7942_0078	0.76	-0.7
76,958	-		Synpcc7942_0078	0.76	-0.6
77,016	+		Synpcc7942_0078	0.89	-1.1
77,024	-				+1.3
77,028	+				+0.7
77,047	+				-1.5
77,121	+				-1.1
77,128	-				+2.2
77,128	-				+4.9
77,134	-				-0.7
77,166	-				-1.1
77,627	+				+0.1
77,674	+				-2.4
77,696	+				-1.5
77,717	-				-2.1
77,717	-				-2.9
77,719	+				-2.9
77,809	+		Synpcc7942_0080	0.13	-1.1
77,811	-		Synpcc7942_0080	0.13	-1.5
77,824	+		Synpcc7942_0080	0.14	-2.9
77,827	-		Synpcc7942_0080	0.15	-1.3
77,832	-		Synpcc7942_0080	0.15	+0.5
77,832	-		Synpcc7942_0080	0.15	-2.9
77,841	+		Synpcc7942_0080	0.16	-1.5
77,843	+		Synpcc7942_0080	0.16	-1.8
77,860	-		Synpcc7942_0080	0.17	+1.5
77,871	+		Synpcc7942_0080	0.18	-2.5
77,879	-		Synpcc7942_0080	0.19	-0.5
77,879	-		Synpcc7942_0080	0.19	-3.3
77,879	-		Synpcc7942_0080	0.19	-1.3
77,881	+		Synpcc7942_0080	0.19	-2.9
77,913	+		Synpcc7942_0080	0.22	+0.5
77,923	+		Synpcc7942_0080	0.22	+0.5
77,923	+		Synpcc7942_0080	0.22	-3.1
77,931	-		Synpcc7942_0080	0.23	-1.6
77,931	-		Synpcc7942_0080	0.23	-1.1
77,949	+		Synpcc7942_0080	0.25	-2.1
77,966	-		Synpcc7942_0080	0.26	-0.5
78,019	+		Synpcc7942_0080	0.30	+1.5
78,019	+		Synpcc7942_0080	0.30	-2.1
78,019	+		Synpcc7942_0080	0.30	-2.3
78,027	-		Synpcc7942_0080	0.31	-1.8
78,027	-		Synpcc7942_0080	0.31	-1.5
78,033	-		Synpcc7942_0080	0.31	+0.5
78,039	-		Synpcc7942_0080	0.32	-3.9
78,047	+		Synpcc7942_0080	0.33	-2.7
78,047	+		Synpcc7942_0080	0.33	-2.1
78,075	+		Synpcc7942_0080	0.35	-2.9
78,151	+				-0.5
78,151	+		Synpcc7942_0080	0.41	-0.5
78,159	-		Synpcc7942_0080	0.42	-1.1
78,159	-		Synpcc7942_0080	0.42	-4.4
78,184	+		Synpcc7942_0080	0.44	+0.1
78,192	-		Synpcc7942_0080	0.44	-0.5
78,194	+		Synpcc7942_0080	0.45	-1.9
78,194	+				-1.5
78,204	-		Synpcc7942_0080	0.45	-2.4
78,204	-		Synpcc7942_0080	0.45	-2.5
78,210	+		Synpcc7942_0080	0.46	-1.8
78,211	-		Synpcc7942_0080	0.46	-2.9
78,245	+		Synpcc7942_0080	0.49	-1.5
78,253	-		Synpcc7942_0080	0.49	-2.5
78,255	+		Synpcc7942_0080	0.50	-3.4
78,260	-		Synpcc7942_0080	0.50	-2.1
78,301	-		Synpcc7942_0080	0.53	-2.1
78,312	-		Synpcc7942_0080	0.54	-3.7
78,318	-		Synpcc7942_0080	0.55	-1.8
78,333	+		Synpcc7942_0080	0.56	-3.3
78,398	+		Synpcc7942_0080	0.61	-2.2
78,398	+		Synpcc7942_0080	0.61	-2.5
78,463	+		Synpcc7942_0080	0.67	-0.5
78,471	-		Synpcc7942_0080	0.67	-0.5
78,471	-		Synpcc7942_0080	0.67	-1.5
78,471	-		Synpcc7942_0080	0.67	-2.3
78,496	-		Synpcc7942_0080	0.69	-0.8
78,506	+		Synpcc7942_0080	0.70	+0.5
78,506	+		Synpcc7942_0080	0.70	-0.7
78,516	-		Synpcc7942_0080	0.71	-0.5
78,536	-		Synpcc7942_0080	0.73	-4.5
78,552	+		Synpcc7942_0080	0.74	-2.3
78,567	-		Synpcc7942_0080	0.75	-3.7
78,582	+		Synpcc7942_0080	0.76	-1.1
78,658	+		Synpcc7942_0080	0.83	-2.4
78,664	+		Synpcc7942_0080	0.83	-1.1
78,694	+		Synpcc7942_0080	0.85	-1.5
78,712	+		Synpcc7942_0080	0.87	-2.1
78,727	+		Synpcc7942_0080	0.88	-1.5
78,739	+		Synpcc7942_0080	0.89	-2.5
78,739	+		Synpcc7942_0080	0.89	-3.2
78,739	+		Synpcc7942_0080	0.89	-3.4
78,747	-		Synpcc7942_0080	0.90	-2.3
78,747	-		Synpcc7942_0080	0.90	-1.8
78,759	-				-1.5
78,760	+				-1.8
78,768	-				-0.5
78,773	+				-2.1
78,802	-				-1.5
78,802	-				-0.5
78,819	-				-3.6
78,847	+				-2.1
78,867	-				-1.8
78,877	-				+0.5
78,881	-				-0.3
78,912	+				+0.5
78,931	+				-1.8
78,936	+				-0.1
78,939	-				-1.1
78,939	-				-2.1
78,944	-				-3.2
78,947	+				-1.8
78,953	+				-0.3
78,956	-				-0.5
78,961	-				-1.5
78,961	-				+3.7
78,961	-				-1.1
78,961	-				-0.5
78,992	-				-0.5
78,993	-				+1.7
78,998	-				+0.7
79,009	+		Synpcc7942_0081	0.10	+3.1
79,009	+		Synpcc7942_0081	0.10	+0.9
79,042	+		Synpcc7942_0081	0.26	+2.7
79,069	+		Synpcc7942_0081	0.39	+0.5
79,080	+		Synpcc7942_0081	0.44	-0.5
79,114	+		Synpcc7942_0081	0.60	-2.1
79,198	+				-1.8
79,198	+				-1.1
79,200	-				+0.5
79,224	+				-0.5
79,224	+				-1.1
79,239	+				+2.1
79,242	-				+0.8
79,270	-				-1.5