Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_4113 and Pf1N1B4_4114 overlap by 2 nucleotides Pf1N1B4_4114 and Pf1N1B4_4115 are separated by 97 nucleotides Pf1N1B4_4115 and Pf1N1B4_4116 are separated by 16 nucleotides Pf1N1B4_4116 and Pf1N1B4_4117 are separated by 123 nucleotides
Pf1N1B4_4113 - Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1), at 4,557,561 to 4,558,040
_4113
Pf1N1B4_4114 - hypothetical protein, at 4,558,039 to 4,558,152
_4114
Pf1N1B4_4115 - FIG074102: hypothetical protein, at 4,558,250 to 4,558,729
_4115
Pf1N1B4_4116 - FIG011065: hypothetical protein, at 4,558,746 to 4,559,504
_4116
Pf1N1B4_4117 - hypothetical protein, at 4,559,628 to 4,559,915
_4117
Position (kb)
4558
4559
4560 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4557.971 kb on + strand at 4557.972 kb on - strand, within Pf1N1B4_4113 at 4557.972 kb on - strand, within Pf1N1B4_4113 at 4558.062 kb on - strand, within Pf1N1B4_4114 at 4558.062 kb on - strand, within Pf1N1B4_4114 at 4558.554 kb on + strand, within Pf1N1B4_4115 at 4558.747 kb on + strand at 4558.830 kb on - strand, within Pf1N1B4_4116 at 4558.830 kb on - strand, within Pf1N1B4_4116 at 4558.900 kb on + strand, within Pf1N1B4_4116 at 4558.930 kb on - strand at 4558.930 kb on - strand, within Pf1N1B4_4116 at 4558.941 kb on + strand at 4558.942 kb on - strand, within Pf1N1B4_4116 at 4558.942 kb on - strand, within Pf1N1B4_4116 at 4559.063 kb on - strand, within Pf1N1B4_4116 at 4559.164 kb on + strand, within Pf1N1B4_4116 at 4559.164 kb on + strand, within Pf1N1B4_4116 at 4559.164 kb on + strand, within Pf1N1B4_4116 at 4559.165 kb on - strand at 4559.165 kb on - strand, within Pf1N1B4_4116 at 4559.361 kb on - strand, within Pf1N1B4_4116 at 4559.361 kb on - strand, within Pf1N1B4_4116 at 4559.546 kb on - strand at 4559.546 kb on - strand at 4559.546 kb on - strand at 4559.546 kb on - strand at 4559.554 kb on - strand at 4559.554 kb on - strand at 4559.589 kb on - strand at 4559.589 kb on - strand at 4559.612 kb on + strand at 4559.691 kb on - strand, within Pf1N1B4_4117 at 4559.932 kb on + strand at 4559.932 kb on + strand at 4559.932 kb on + strand at 4560.044 kb on - strand at 4560.076 kb on + strand at 4560.080 kb on + strand at 4560.080 kb on + strand at 4560.081 kb on - strand at 4560.090 kb on + strand at 4560.091 kb on - strand at 4560.149 kb on + strand at 4560.247 kb on - strand at 4560.247 kb on - strand at 4560.304 kb on - strand at 4560.352 kb on - strand at 4560.352 kb on - strand at 4560.355 kb on + strand at 4560.356 kb on - strand at 4560.356 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 4,557,971 + -1.0 4,557,972 - Pf1N1B4_4113 0.86 +0.6 4,557,972 - Pf1N1B4_4113 0.86 +0.0 4,558,062 - Pf1N1B4_4114 0.20 +0.6 4,558,062 - Pf1N1B4_4114 0.20 +0.6 4,558,554 + Pf1N1B4_4115 0.63 -0.8 4,558,747 + +0.8 4,558,830 - Pf1N1B4_4116 0.11 -1.6 4,558,830 - Pf1N1B4_4116 0.11 -0.4 4,558,900 + Pf1N1B4_4116 0.20 -1.8 4,558,930 - -0.6 4,558,930 - Pf1N1B4_4116 0.24 +1.6 4,558,941 + -2.0 4,558,942 - Pf1N1B4_4116 0.26 +1.0 4,558,942 - Pf1N1B4_4116 0.26 +0.0 4,559,063 - Pf1N1B4_4116 0.42 -2.3 4,559,164 + Pf1N1B4_4116 0.55 -1.0 4,559,164 + Pf1N1B4_4116 0.55 +0.0 4,559,164 + Pf1N1B4_4116 0.55 +0.6 4,559,165 - +0.0 4,559,165 - Pf1N1B4_4116 0.55 -1.6 4,559,361 - Pf1N1B4_4116 0.81 -2.0 4,559,361 - Pf1N1B4_4116 0.81 -1.6 4,559,546 - +0.6 4,559,546 - -1.2 4,559,546 - +1.3 4,559,546 - +1.2 4,559,554 - -0.1 4,559,554 - -3.2 4,559,589 - -2.6 4,559,589 - +0.3 4,559,612 + +0.0 4,559,691 - Pf1N1B4_4117 0.22 +0.0 4,559,932 + -1.4 4,559,932 + +1.0 4,559,932 + -1.0 4,560,044 - -1.0 4,560,076 + +1.0 4,560,080 + +0.0 4,560,080 + -1.0 4,560,081 - +0.0 4,560,090 + +2.0 4,560,091 - -1.0 4,560,149 + -1.0 4,560,247 - +0.0 4,560,247 - +0.0 4,560,304 - +0.0 4,560,352 - +0.2 4,560,352 - -1.2 4,560,355 + -1.6 4,560,356 - +0.0 4,560,356 - -2.3
Or see this region's nucleotide sequence