Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_230 and Pf1N1B4_231 are separated by 469 nucleotides Pf1N1B4_231 and Pf1N1B4_232 are separated by 47 nucleotides Pf1N1B4_232 and Pf1N1B4_233 overlap by 17 nucleotides
Pf1N1B4_230 - FIG00953472: hypothetical protein, at 291,131 to 291,601
_230
Pf1N1B4_231 - Sensor histidine kinase, at 292,071 to 292,964
_231
Pf1N1B4_232 - DNA-binding response regulator, LuxR family, at 293,012 to 293,620
_232
Pf1N1B4_233 - Transcription regulator [contains diacylglycerol kinase catalytic domain], at 293,604 to 294,536
_233
Position (kb) 292
293 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 291.071 kb on + strand at 291.071 kb on + strand at 291.071 kb on + strand at 291.071 kb on + strand at 291.071 kb on + strand at 291.072 kb on - strand at 291.072 kb on - strand at 291.072 kb on - strand at 291.072 kb on - strand at 291.072 kb on - strand at 291.072 kb on - strand at 291.072 kb on - strand at 291.072 kb on - strand at 291.072 kb on - strand at 291.072 kb on - strand at 291.126 kb on + strand at 291.127 kb on - strand at 291.127 kb on - strand at 291.127 kb on - strand at 291.127 kb on - strand at 291.127 kb on - strand at 291.127 kb on - strand at 291.127 kb on - strand at 291.127 kb on - strand at 291.127 kb on - strand at 291.127 kb on - strand at 291.344 kb on - strand, within Pf1N1B4_230 at 291.505 kb on - strand, within Pf1N1B4_230 at 291.505 kb on - strand, within Pf1N1B4_230 at 291.600 kb on - strand at 291.600 kb on - strand at 291.600 kb on - strand at 291.633 kb on + strand at 291.653 kb on - strand at 291.654 kb on + strand at 291.655 kb on - strand at 291.713 kb on - strand at 291.713 kb on - strand at 291.716 kb on + strand at 291.717 kb on - strand at 291.717 kb on - strand at 291.717 kb on - strand at 291.738 kb on - strand at 291.831 kb on + strand at 291.844 kb on + strand at 291.844 kb on + strand at 291.844 kb on + strand at 291.844 kb on + strand at 291.844 kb on + strand at 291.845 kb on - strand at 291.845 kb on - strand at 291.845 kb on - strand at 291.845 kb on - strand at 291.845 kb on - strand at 291.845 kb on - strand at 291.845 kb on - strand at 291.850 kb on + strand at 291.850 kb on + strand at 291.850 kb on + strand at 291.850 kb on + strand at 291.851 kb on - strand at 291.851 kb on - strand at 291.851 kb on - strand at 291.851 kb on - strand at 291.851 kb on - strand at 291.851 kb on - strand at 291.852 kb on + strand at 291.878 kb on + strand at 291.879 kb on - strand at 291.879 kb on - strand at 291.885 kb on + strand at 291.889 kb on - strand at 292.070 kb on + strand at 292.071 kb on - strand at 292.074 kb on + strand at 292.075 kb on - strand at 292.075 kb on - strand at 292.095 kb on - strand at 292.095 kb on - strand at 292.095 kb on - strand at 292.148 kb on + strand at 292.148 kb on + strand at 292.149 kb on - strand at 292.193 kb on - strand, within Pf1N1B4_231 at 292.224 kb on - strand, within Pf1N1B4_231 at 292.561 kb on + strand, within Pf1N1B4_231 at 292.561 kb on + strand at 292.562 kb on - strand, within Pf1N1B4_231 at 292.580 kb on + strand, within Pf1N1B4_231 at 292.580 kb on + strand, within Pf1N1B4_231 at 292.580 kb on + strand, within Pf1N1B4_231 at 292.581 kb on - strand, within Pf1N1B4_231 at 292.682 kb on + strand, within Pf1N1B4_231 at 292.682 kb on + strand, within Pf1N1B4_231 at 292.683 kb on - strand at 292.684 kb on + strand, within Pf1N1B4_231 at 292.684 kb on + strand, within Pf1N1B4_231 at 292.684 kb on + strand, within Pf1N1B4_231 at 292.706 kb on + strand, within Pf1N1B4_231 at 292.849 kb on + strand, within Pf1N1B4_231 at 292.849 kb on + strand, within Pf1N1B4_231 at 292.931 kb on - strand at 292.949 kb on + strand at 292.950 kb on - strand at 292.969 kb on + strand at 292.969 kb on + strand at 292.970 kb on - strand at 292.974 kb on + strand at 292.974 kb on + strand at 292.974 kb on + strand at 292.974 kb on + strand at 292.975 kb on - strand at 292.975 kb on - strand at 292.999 kb on + strand at 293.049 kb on + strand at 293.125 kb on + strand at 293.558 kb on + strand, within Pf1N1B4_232 at 293.559 kb on - strand, within Pf1N1B4_232 at 293.559 kb on - strand, within Pf1N1B4_232 at 293.735 kb on + strand, within Pf1N1B4_233 at 293.736 kb on - strand, within Pf1N1B4_233 at 293.736 kb on - strand at 293.737 kb on + strand at 293.738 kb on - strand at 293.738 kb on - strand, within Pf1N1B4_233 at 293.738 kb on - strand, within Pf1N1B4_233 at 293.738 kb on - strand, within Pf1N1B4_233 at 293.738 kb on - strand, within Pf1N1B4_233 at 293.738 kb on - strand at 293.738 kb on - strand, within Pf1N1B4_233
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 291,071 + +0.7 291,071 + -0.8 291,071 + -1.8 291,071 + +0.2 291,071 + -0.2 291,072 - +0.2 291,072 - -0.8 291,072 - +1.2 291,072 - +1.3 291,072 - +0.5 291,072 - -2.2 291,072 - +0.2 291,072 - -0.8 291,072 - -1.4 291,072 - +0.2 291,126 + +0.2 291,127 - -0.5 291,127 - +0.2 291,127 - -0.8 291,127 - +0.8 291,127 - -2.8 291,127 - -0.6 291,127 - +2.5 291,127 - -1.2 291,127 - -1.1 291,127 - +1.2 291,344 - Pf1N1B4_230 0.45 +0.2 291,505 - Pf1N1B4_230 0.79 -0.3 291,505 - Pf1N1B4_230 0.79 -0.4 291,600 - -0.1 291,600 - +1.6 291,600 - -0.3 291,633 + -0.8 291,653 - +0.2 291,654 + +1.5 291,655 - -1.3 291,713 - +0.2 291,713 - -1.1 291,716 + +0.2 291,717 - +0.2 291,717 - +1.4 291,717 - -3.2 291,738 - +1.7 291,831 + +0.2 291,844 + +0.2 291,844 + +0.2 291,844 + -0.4 291,844 + -1.8 291,844 + +1.2 291,845 - -2.2 291,845 - -0.3 291,845 - -0.8 291,845 - +0.6 291,845 - -0.8 291,845 - -1.4 291,845 - -0.4 291,850 + +0.6 291,850 + -1.4 291,850 + +0.7 291,850 + -2.8 291,851 - +1.2 291,851 - -2.0 291,851 - +0.2 291,851 - -0.5 291,851 - -0.8 291,851 - -1.2 291,852 + +0.2 291,878 + -0.3 291,879 - -0.8 291,879 - -0.4 291,885 + -0.2 291,889 - +0.4 292,070 + -0.4 292,071 - -1.4 292,074 + +0.6 292,075 - +0.2 292,075 - -0.3 292,095 - +0.5 292,095 - -1.4 292,095 - +1.2 292,148 + +1.2 292,148 + +2.5 292,149 - -0.4 292,193 - Pf1N1B4_231 0.14 -2.0 292,224 - Pf1N1B4_231 0.17 -2.2 292,561 + Pf1N1B4_231 0.55 -2.2 292,561 + +2.5 292,562 - Pf1N1B4_231 0.55 +0.2 292,580 + Pf1N1B4_231 0.57 -0.8 292,580 + Pf1N1B4_231 0.57 -0.3 292,580 + Pf1N1B4_231 0.57 -0.8 292,581 - Pf1N1B4_231 0.57 -1.6 292,682 + Pf1N1B4_231 0.68 -0.8 292,682 + Pf1N1B4_231 0.68 +1.5 292,683 - -0.8 292,684 + Pf1N1B4_231 0.69 -0.8 292,684 + Pf1N1B4_231 0.69 -0.5 292,684 + Pf1N1B4_231 0.69 -0.4 292,706 + Pf1N1B4_231 0.71 +1.7 292,849 + Pf1N1B4_231 0.87 -1.7 292,849 + Pf1N1B4_231 0.87 -1.2 292,931 - -0.4 292,949 + -0.3 292,950 - -0.2 292,969 + -1.4 292,969 + -0.4 292,970 - -0.5 292,974 + -0.8 292,974 + -1.2 292,974 + -2.4 292,974 + -0.4 292,975 - +2.5 292,975 - -0.8 292,999 + +0.9 293,049 + +0.2 293,125 + -0.8 293,558 + Pf1N1B4_232 0.90 +0.7 293,559 - Pf1N1B4_232 0.90 +0.7 293,559 - Pf1N1B4_232 0.90 -0.0 293,735 + Pf1N1B4_233 0.14 -0.8 293,736 - Pf1N1B4_233 0.14 -1.4 293,736 - +1.2 293,737 + -0.8 293,738 - -0.8 293,738 - Pf1N1B4_233 0.14 +0.2 293,738 - Pf1N1B4_233 0.14 -0.8 293,738 - Pf1N1B4_233 0.14 -1.1 293,738 - Pf1N1B4_233 0.14 -0.4 293,738 - -0.4 293,738 - Pf1N1B4_233 0.14 -0.6
Or see this region's nucleotide sequence