Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18215 and BWI76_RS18220 are separated by 4 nucleotides BWI76_RS18220 and BWI76_RS18225 are separated by 362 nucleotides BWI76_RS18225 and BWI76_RS18230 are separated by 28 nucleotides
BWI76_RS18215: BWI76_RS18215 - putative cytoplasmic protein, at 3,784,143 to 3,785,282
_RS18215
BWI76_RS18220: BWI76_RS18220 - MFS transporter, at 3,785,287 to 3,786,870
_RS18220
BWI76_RS18225: BWI76_RS18225 - universal stress protein C, at 3,787,233 to 3,787,661
_RS18225
BWI76_RS18230: BWI76_RS18230 - trehalose-6-phosphate synthase, at 3,787,690 to 3,789,114
_RS18230
Position (kb)
3785
3786
3787 Strain fitness (log2 ratio)
-2
-1
0
1 at 3784.331 kb on + strand, within BWI76_RS18215 at 3784.538 kb on - strand, within BWI76_RS18215 at 3784.608 kb on - strand, within BWI76_RS18215 at 3784.827 kb on - strand, within BWI76_RS18215 at 3784.871 kb on + strand, within BWI76_RS18215 at 3784.901 kb on - strand, within BWI76_RS18215 at 3785.072 kb on + strand, within BWI76_RS18215 at 3785.098 kb on - strand, within BWI76_RS18215 at 3785.100 kb on + strand, within BWI76_RS18215 at 3785.170 kb on + strand at 3785.257 kb on - strand at 3785.257 kb on - strand at 3785.267 kb on - strand at 3785.446 kb on - strand, within BWI76_RS18220 at 3785.549 kb on + strand, within BWI76_RS18220 at 3785.562 kb on - strand, within BWI76_RS18220 at 3785.691 kb on - strand, within BWI76_RS18220 at 3785.776 kb on + strand, within BWI76_RS18220 at 3785.783 kb on - strand, within BWI76_RS18220 at 3785.873 kb on + strand, within BWI76_RS18220 at 3785.873 kb on + strand, within BWI76_RS18220 at 3785.878 kb on + strand, within BWI76_RS18220 at 3786.177 kb on + strand, within BWI76_RS18220 at 3786.241 kb on - strand, within BWI76_RS18220 at 3786.311 kb on - strand, within BWI76_RS18220 at 3786.311 kb on - strand, within BWI76_RS18220 at 3786.311 kb on - strand, within BWI76_RS18220 at 3786.403 kb on + strand, within BWI76_RS18220 at 3787.542 kb on + strand, within BWI76_RS18225 at 3787.542 kb on + strand, within BWI76_RS18225 at 3787.567 kb on + strand, within BWI76_RS18225 at 3787.672 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 3,784,331 + BWI76_RS18215 0.16 -0.1 3,784,538 - BWI76_RS18215 0.35 -0.8 3,784,608 - BWI76_RS18215 0.41 -0.3 3,784,827 - BWI76_RS18215 0.60 +0.3 3,784,871 + BWI76_RS18215 0.64 +0.2 3,784,901 - BWI76_RS18215 0.66 -0.4 3,785,072 + BWI76_RS18215 0.81 -0.8 3,785,098 - BWI76_RS18215 0.84 -0.4 3,785,100 + BWI76_RS18215 0.84 +1.1 3,785,170 + +0.7 3,785,257 - +1.0 3,785,257 - +0.6 3,785,267 - +0.2 3,785,446 - BWI76_RS18220 0.10 -1.9 3,785,549 + BWI76_RS18220 0.17 -0.2 3,785,562 - BWI76_RS18220 0.17 +0.1 3,785,691 - BWI76_RS18220 0.26 -0.6 3,785,776 + BWI76_RS18220 0.31 +0.5 3,785,783 - BWI76_RS18220 0.31 -0.1 3,785,873 + BWI76_RS18220 0.37 -0.4 3,785,873 + BWI76_RS18220 0.37 +0.1 3,785,878 + BWI76_RS18220 0.37 +0.5 3,786,177 + BWI76_RS18220 0.56 -0.1 3,786,241 - BWI76_RS18220 0.60 -0.4 3,786,311 - BWI76_RS18220 0.65 -0.3 3,786,311 - BWI76_RS18220 0.65 +0.3 3,786,311 - BWI76_RS18220 0.65 -0.2 3,786,403 + BWI76_RS18220 0.70 +0.8 3,787,542 + BWI76_RS18225 0.72 -0.4 3,787,542 + BWI76_RS18225 0.72 -0.8 3,787,567 + BWI76_RS18225 0.78 -0.2 3,787,672 + -0.2
Or see this region's nucleotide sequence