Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18215

Experiment: L-Rhamnose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS18210 and BWI76_RS18215 are separated by 120 nucleotidesBWI76_RS18215 and BWI76_RS18220 are separated by 4 nucleotides BWI76_RS18210: BWI76_RS18210 - arginine--tRNA ligase, at 3,782,289 to 3,784,022 _RS18210 BWI76_RS18215: BWI76_RS18215 - putative cytoplasmic protein, at 3,784,143 to 3,785,282 _RS18215 BWI76_RS18220: BWI76_RS18220 - MFS transporter, at 3,785,287 to 3,786,870 _RS18220 Position (kb) 3784 3785 3786Strain fitness (log2 ratio) -2 -1 0 1at 3784.258 kb on - strand, within BWI76_RS18215at 3784.331 kb on + strand, within BWI76_RS18215at 3784.538 kb on - strand, within BWI76_RS18215at 3784.608 kb on - strand, within BWI76_RS18215at 3784.827 kb on - strand, within BWI76_RS18215at 3784.871 kb on + strand, within BWI76_RS18215at 3784.901 kb on - strand, within BWI76_RS18215at 3785.072 kb on + strand, within BWI76_RS18215at 3785.098 kb on - strand, within BWI76_RS18215at 3785.100 kb on + strand, within BWI76_RS18215at 3785.170 kb on + strandat 3785.257 kb on - strandat 3785.257 kb on - strandat 3785.267 kb on - strandat 3785.446 kb on - strand, within BWI76_RS18220at 3785.549 kb on + strand, within BWI76_RS18220at 3785.562 kb on - strand, within BWI76_RS18220at 3785.691 kb on - strand, within BWI76_RS18220at 3785.776 kb on + strand, within BWI76_RS18220at 3785.783 kb on - strand, within BWI76_RS18220at 3785.873 kb on + strand, within BWI76_RS18220at 3785.873 kb on + strand, within BWI76_RS18220at 3785.878 kb on + strand, within BWI76_RS18220at 3786.177 kb on + strand, within BWI76_RS18220at 3786.241 kb on - strand, within BWI76_RS18220

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Rhamnose (C)
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3,784,258 - BWI76_RS18215 0.10 -0.2
3,784,331 + BWI76_RS18215 0.16 -0.1
3,784,538 - BWI76_RS18215 0.35 -0.8
3,784,608 - BWI76_RS18215 0.41 -0.3
3,784,827 - BWI76_RS18215 0.60 +0.3
3,784,871 + BWI76_RS18215 0.64 +0.2
3,784,901 - BWI76_RS18215 0.66 -0.4
3,785,072 + BWI76_RS18215 0.81 -0.8
3,785,098 - BWI76_RS18215 0.84 -0.4
3,785,100 + BWI76_RS18215 0.84 +1.1
3,785,170 + +0.7
3,785,257 - +1.0
3,785,257 - +0.6
3,785,267 - +0.2
3,785,446 - BWI76_RS18220 0.10 -1.9
3,785,549 + BWI76_RS18220 0.17 -0.2
3,785,562 - BWI76_RS18220 0.17 +0.1
3,785,691 - BWI76_RS18220 0.26 -0.6
3,785,776 + BWI76_RS18220 0.31 +0.5
3,785,783 - BWI76_RS18220 0.31 -0.1
3,785,873 + BWI76_RS18220 0.37 -0.4
3,785,873 + BWI76_RS18220 0.37 +0.1
3,785,878 + BWI76_RS18220 0.37 +0.5
3,786,177 + BWI76_RS18220 0.56 -0.1
3,786,241 - BWI76_RS18220 0.60 -0.4

Or see this region's nucleotide sequence