Experiment: L-Rhamnose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18210 and BWI76_RS18215 are separated by 120 nucleotides BWI76_RS18215 and BWI76_RS18220 are separated by 4 nucleotides
BWI76_RS18210: BWI76_RS18210 - arginine--tRNA ligase, at 3,782,289 to 3,784,022
_RS18210
BWI76_RS18215: BWI76_RS18215 - putative cytoplasmic protein, at 3,784,143 to 3,785,282
_RS18215
BWI76_RS18220: BWI76_RS18220 - MFS transporter, at 3,785,287 to 3,786,870
_RS18220
Position (kb)
3784
3785
3786 Strain fitness (log2 ratio)
-2
-1
0
1 at 3784.258 kb on - strand, within BWI76_RS18215 at 3784.331 kb on + strand, within BWI76_RS18215 at 3784.538 kb on - strand, within BWI76_RS18215 at 3784.608 kb on - strand, within BWI76_RS18215 at 3784.827 kb on - strand, within BWI76_RS18215 at 3784.871 kb on + strand, within BWI76_RS18215 at 3784.901 kb on - strand, within BWI76_RS18215 at 3785.072 kb on + strand, within BWI76_RS18215 at 3785.098 kb on - strand, within BWI76_RS18215 at 3785.100 kb on + strand, within BWI76_RS18215 at 3785.170 kb on + strand at 3785.257 kb on - strand at 3785.257 kb on - strand at 3785.267 kb on - strand at 3785.446 kb on - strand, within BWI76_RS18220 at 3785.549 kb on + strand, within BWI76_RS18220 at 3785.562 kb on - strand, within BWI76_RS18220 at 3785.691 kb on - strand, within BWI76_RS18220 at 3785.776 kb on + strand, within BWI76_RS18220 at 3785.783 kb on - strand, within BWI76_RS18220 at 3785.873 kb on + strand, within BWI76_RS18220 at 3785.873 kb on + strand, within BWI76_RS18220 at 3785.878 kb on + strand, within BWI76_RS18220 at 3786.177 kb on + strand, within BWI76_RS18220 at 3786.241 kb on - strand, within BWI76_RS18220
Per-strain Table
Position Strand Gene LocusTag Fraction L-Rhamnose (C) remove 3,784,258 - BWI76_RS18215 0.10 -0.2 3,784,331 + BWI76_RS18215 0.16 -0.1 3,784,538 - BWI76_RS18215 0.35 -0.8 3,784,608 - BWI76_RS18215 0.41 -0.3 3,784,827 - BWI76_RS18215 0.60 +0.3 3,784,871 + BWI76_RS18215 0.64 +0.2 3,784,901 - BWI76_RS18215 0.66 -0.4 3,785,072 + BWI76_RS18215 0.81 -0.8 3,785,098 - BWI76_RS18215 0.84 -0.4 3,785,100 + BWI76_RS18215 0.84 +1.1 3,785,170 + +0.7 3,785,257 - +1.0 3,785,257 - +0.6 3,785,267 - +0.2 3,785,446 - BWI76_RS18220 0.10 -1.9 3,785,549 + BWI76_RS18220 0.17 -0.2 3,785,562 - BWI76_RS18220 0.17 +0.1 3,785,691 - BWI76_RS18220 0.26 -0.6 3,785,776 + BWI76_RS18220 0.31 +0.5 3,785,783 - BWI76_RS18220 0.31 -0.1 3,785,873 + BWI76_RS18220 0.37 -0.4 3,785,873 + BWI76_RS18220 0.37 +0.1 3,785,878 + BWI76_RS18220 0.37 +0.5 3,786,177 + BWI76_RS18220 0.56 -0.1 3,786,241 - BWI76_RS18220 0.60 -0.4
Or see this region's nucleotide sequence