Experiment: Uridine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3168 and Ac3H11_3169 are separated by 196 nucleotides Ac3H11_3169 and Ac3H11_3170 are separated by 3 nucleotides
Ac3H11_3168 - Response regulator, at 71,446 to 72,759
_3168
Ac3H11_3169 - hypothetical protein, at 72,956 to 73,075
_3169
Ac3H11_3170 - membrane protein, putative, at 73,079 to 74,716
_3170
Position (kb)
72
73
74 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 71.998 kb on + strand, within Ac3H11_3168 at 72.125 kb on + strand, within Ac3H11_3168 at 72.126 kb on - strand, within Ac3H11_3168 at 72.126 kb on - strand, within Ac3H11_3168 at 72.238 kb on + strand, within Ac3H11_3168 at 72.239 kb on - strand, within Ac3H11_3168 at 72.239 kb on - strand, within Ac3H11_3168 at 72.375 kb on + strand, within Ac3H11_3168 at 72.375 kb on + strand, within Ac3H11_3168 at 72.375 kb on + strand, within Ac3H11_3168 at 72.412 kb on + strand, within Ac3H11_3168 at 72.474 kb on + strand, within Ac3H11_3168 at 72.626 kb on + strand, within Ac3H11_3168 at 72.627 kb on - strand, within Ac3H11_3168 at 72.665 kb on + strand at 72.666 kb on - strand at 72.666 kb on - strand at 72.666 kb on - strand at 72.757 kb on + strand at 72.757 kb on + strand at 72.758 kb on - strand at 72.758 kb on - strand at 72.766 kb on + strand at 72.900 kb on + strand at 72.900 kb on + strand at 72.900 kb on + strand at 72.900 kb on + strand at 72.900 kb on + strand at 72.900 kb on + strand at 72.901 kb on - strand at 72.901 kb on - strand at 72.901 kb on - strand at 72.957 kb on + strand at 72.958 kb on - strand at 72.958 kb on - strand at 72.968 kb on + strand, within Ac3H11_3169 at 73.208 kb on - strand at 73.311 kb on - strand, within Ac3H11_3170 at 73.607 kb on + strand, within Ac3H11_3170 at 73.725 kb on - strand, within Ac3H11_3170 at 73.725 kb on - strand, within Ac3H11_3170 at 73.725 kb on - strand, within Ac3H11_3170 at 73.910 kb on + strand, within Ac3H11_3170 at 73.910 kb on + strand, within Ac3H11_3170 at 73.910 kb on + strand, within Ac3H11_3170 at 73.911 kb on - strand, within Ac3H11_3170 at 73.911 kb on - strand, within Ac3H11_3170 at 73.911 kb on - strand, within Ac3H11_3170 at 73.955 kb on + strand, within Ac3H11_3170 at 73.955 kb on + strand, within Ac3H11_3170 at 73.955 kb on + strand, within Ac3H11_3170 at 73.956 kb on - strand, within Ac3H11_3170
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (N) remove 71,998 + Ac3H11_3168 0.42 -0.0 72,125 + Ac3H11_3168 0.52 +1.0 72,126 - Ac3H11_3168 0.52 +0.7 72,126 - Ac3H11_3168 0.52 -3.4 72,238 + Ac3H11_3168 0.60 -1.2 72,239 - Ac3H11_3168 0.60 +0.3 72,239 - Ac3H11_3168 0.60 +1.4 72,375 + Ac3H11_3168 0.71 +0.2 72,375 + Ac3H11_3168 0.71 -0.5 72,375 + Ac3H11_3168 0.71 +0.3 72,412 + Ac3H11_3168 0.74 +0.3 72,474 + Ac3H11_3168 0.78 -1.5 72,626 + Ac3H11_3168 0.90 -1.4 72,627 - Ac3H11_3168 0.90 -0.4 72,665 + +0.7 72,666 - -0.1 72,666 - +1.2 72,666 - +0.4 72,757 + -1.1 72,757 + +0.3 72,758 - -1.3 72,758 - -0.6 72,766 + +0.9 72,900 + -0.3 72,900 + +1.0 72,900 + +0.5 72,900 + -1.0 72,900 + -0.9 72,900 + +0.7 72,901 - +0.9 72,901 - -0.5 72,901 - -0.1 72,957 + -2.6 72,958 - -0.1 72,958 - -0.0 72,968 + Ac3H11_3169 0.10 -1.2 73,208 - -1.6 73,311 - Ac3H11_3170 0.14 +0.4 73,607 + Ac3H11_3170 0.32 -0.8 73,725 - Ac3H11_3170 0.39 +0.8 73,725 - Ac3H11_3170 0.39 +2.4 73,725 - Ac3H11_3170 0.39 +0.6 73,910 + Ac3H11_3170 0.51 +0.6 73,910 + Ac3H11_3170 0.51 +0.7 73,910 + Ac3H11_3170 0.51 +0.3 73,911 - Ac3H11_3170 0.51 +0.9 73,911 - Ac3H11_3170 0.51 +1.0 73,911 - Ac3H11_3170 0.51 +0.2 73,955 + Ac3H11_3170 0.53 +0.7 73,955 + Ac3H11_3170 0.53 +0.1 73,955 + Ac3H11_3170 0.53 +1.2 73,956 - Ac3H11_3170 0.54 -0.4
Or see this region's nucleotide sequence