Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17885

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,937,292	+		AO353_17880	0.56	-0.3
3,937,376	+		AO353_17880	0.63	+0.4
3,937,377	-		AO353_17880	0.63	-1.0
3,937,446	+		AO353_17880	0.69	-1.6
3,937,506	-		AO353_17880	0.73	-0.4
3,937,506	-		AO353_17880	0.73	+3.0
3,937,506	-		AO353_17880	0.73	-0.0
3,937,506	-		AO353_17880	0.73	+0.5
3,937,508	+		AO353_17880	0.74	+0.5
3,937,509	-		AO353_17880	0.74	+3.0
3,937,573	+		AO353_17880	0.79	-0.3
3,937,753	+				-0.6
3,937,753	+				+1.0
3,937,754	-				+1.3
3,937,754	-				+1.7
3,937,829	+				+0.2
3,937,829	+				+0.5
3,937,829	+				-0.6
3,937,830	-				-1.4
3,937,901	-				-1.9
3,937,911	+				-2.7
3,937,911	+				+1.0
3,937,911	+				+1.5
3,937,917	+				-2.0
3,937,917	+				+0.2
3,937,917	+				-0.6
3,937,918	-				-0.0
3,937,926	+				-0.4
3,937,926	+				+1.5
3,937,927	-				+1.0
3,937,927	-				-1.6
3,937,947	-				-1.0
3,938,090	+		AO353_17885	0.22	-2.0
3,938,211	+		AO353_17885	0.54	-2.6
3,938,359	-				-0.3
3,938,359	-				-1.0
3,938,359	-				+0.3
3,938,404	+				+0.4
3,938,404	+				-1.4
3,938,406	+				+0.5
3,938,406	+				-1.0
3,938,406	+				+0.5
3,938,407	-				+0.4
3,938,407	-				+0.2
3,938,407	-				-1.2
3,938,407	-				-3.0
3,938,407	-				-0.0
3,938,407	-				-2.0
3,938,407	-				+0.2
3,938,407	-				-0.4
3,938,407	-				+0.1
3,938,407	-				+0.4
3,938,454	+				+0.3
3,938,454	+				+0.2
3,938,454	+				+0.2
3,938,454	+				+0.7
3,938,454	+				+0.5
3,938,485	+				-1.5
3,938,486	-				-1.2
3,938,500	+				-0.4
3,938,508	+		AO353_17890	0.11	-0.2
3,938,508	+		AO353_17890	0.11	+1.4
3,938,509	-		AO353_17890	0.11	+1.5
3,938,562	+		AO353_17890	0.23	+1.1
3,938,562	+		AO353_17890	0.23	+1.0
3,938,562	+		AO353_17890	0.23	+1.5
3,938,562	+		AO353_17890	0.23	+1.1
3,938,562	+		AO353_17890	0.23	+0.7
3,938,562	+		AO353_17890	0.23	-0.0
3,938,563	-		AO353_17890	0.23	+1.0
3,938,563	-		AO353_17890	0.23	+0.2
3,938,563	-		AO353_17890	0.23	-1.0
3,938,563	-		AO353_17890	0.23	-0.3
3,938,563	-		AO353_17890	0.23	-0.6
3,938,563	-		AO353_17890	0.23	-1.7
3,938,596	+		AO353_17890	0.30	-0.0
3,938,628	+		AO353_17890	0.37	-0.6
3,938,628	+		AO353_17890	0.37	-0.3
3,938,628	+		AO353_17890	0.37	-1.0
3,938,628	+		AO353_17890	0.37	-0.0
3,938,628	+		AO353_17890	0.37	+1.5
3,938,628	+		AO353_17890	0.37	+0.2
3,938,629	-		AO353_17890	0.37	+0.4
3,938,629	-		AO353_17890	0.37	+0.5
3,938,629	-		AO353_17890	0.37	+0.6
3,938,629	-		AO353_17890	0.37	+1.0
3,938,629	-		AO353_17890	0.37	-0.3
3,938,629	-		AO353_17890	0.37	+1.0
3,938,629	-		AO353_17890	0.37	+0.4
3,938,629	-		AO353_17890	0.37	+0.1
3,938,652	+		AO353_17890	0.42	+0.3
3,938,652	+		AO353_17890	0.42	+0.4
3,938,652	+		AO353_17890	0.42	+1.0
3,938,653	-		AO353_17890	0.42	-0.2
3,938,653	-		AO353_17890	0.42	+0.4
3,938,817	+		AO353_17890	0.77	-1.3
3,938,891	-				+1.5
3,938,891	-				+0.2
3,938,892	+				+1.3
3,938,892	+				-1.9
3,938,892	+				+0.4
3,938,892	+				-0.2
3,938,892	+				+0.2
3,938,892	+				-0.4
3,938,892	+				+0.8
3,938,892	+				+0.6
3,938,892	+				+0.7
3,938,892	+				+0.7
3,938,892	+				+0.5
3,938,892	+				-1.0
3,938,893	-				-1.4
3,938,893	-				-1.0
3,938,893	-				-0.1
3,938,893	-				+2.0
3,938,893	-				-1.0
3,938,893	-				+1.2
3,938,910	+				+0.3
3,938,958	+				+0.3
3,938,958	+				+0.8
3,938,958	+				+1.0
3,938,958	+				-0.3
3,938,958	+				-0.6
3,938,961	-				-1.0
3,938,961	-				-1.1
3,939,049	+				-0.2
3,939,049	+				-0.0
3,939,049	+				-0.2
3,939,049	+				+0.4
3,939,049	+				-0.0
3,939,050	-				-0.0
3,939,050	-				-0.6
3,939,050	-				+1.7
3,939,050	-				+2.0
3,939,050	-				-0.4
3,939,050	-				+0.4
3,939,050	-				-1.6
3,939,050	-				+0.5
3,939,196	+				-1.6
3,939,196	+				-0.9
3,939,196	+				+1.0
3,939,196	+				-0.9
3,939,196	+				-0.0
3,939,196	+				+1.3
3,939,196	+				+0.1
3,939,197	-				+1.0
3,939,197	-				-0.6
3,939,197	-				-0.0
3,939,197	-				+0.8
3,939,206	+				+1.0
3,939,206	+				+1.0
3,939,206	+				+0.6
3,939,207	-				+2.5
3,939,207	-				-0.6
3,939,207	-				-0.6
3,939,227	+		AO353_17895	0.11	+0.7
3,939,227	+		AO353_17895	0.11	+0.7
3,939,227	+		AO353_17895	0.11	+0.2
3,939,227	+		AO353_17895	0.11	-0.5
3,939,227	+		AO353_17895	0.11	-1.1
3,939,227	+		AO353_17895	0.11	-0.6
3,939,227	+		AO353_17895	0.11	+0.2
3,939,227	+		AO353_17895	0.11	+0.5
3,939,227	+		AO353_17895	0.11	-1.4
3,939,228	-		AO353_17895	0.11	+1.0
3,939,228	-		AO353_17895	0.11	-0.0
3,939,228	-		AO353_17895	0.11	+0.7
3,939,228	-		AO353_17895	0.11	-2.2
3,939,228	-		AO353_17895	0.11	+2.3
3,939,228	-		AO353_17895	0.11	+0.8
3,939,228	-		AO353_17895	0.11	+0.2
3,939,228	-		AO353_17895	0.11	+1.2
3,939,228	-		AO353_17895	0.11	-1.6
3,939,268	+		AO353_17895	0.14	+0.2
3,939,268	+		AO353_17895	0.14	+0.3
3,939,268	+		AO353_17895	0.14	+0.6
3,939,269	-		AO353_17895	0.14	+1.3
3,939,269	-		AO353_17895	0.14	+2.2
3,939,269	-		AO353_17895	0.14	+0.4
3,939,269	-		AO353_17895	0.14	+0.6
3,939,269	-		AO353_17895	0.14	+0.5
3,939,269	-		AO353_17895	0.14	+1.8
3,939,269	-		AO353_17895	0.14	-1.5
3,939,269	-		AO353_17895	0.14	-0.9
3,939,269	-		AO353_17895	0.14	+1.3
3,939,269	-		AO353_17895	0.14	+1.0
3,939,269	-		AO353_17895	0.14	+1.0
3,939,269	-		AO353_17895	0.14	-0.3
3,939,269	-		AO353_17895	0.14	-0.4
3,939,269	-		AO353_17895	0.14	+1.5