Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07305 and AO353_07310 overlap by 4 nucleotides AO353_07310 and AO353_07315 overlap by 4 nucleotides AO353_07315 and AO353_07320 are separated by 118 nucleotides AO353_07320 and AO353_07325 overlap by 1 nucleotides
AO353_07305: AO353_07305 - molecular chaperone SurA, at 1,605,478 to 1,606,794
_07305
AO353_07310: AO353_07310 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 1,606,791 to 1,607,780
_07310
AO353_07315: AO353_07315 - rRNA methyltransferase, at 1,607,777 to 1,608,595
_07315
AO353_07320: AO353_07320 - magnesium transporter ApaG, at 1,608,714 to 1,609,094
_07320
AO353_07325: AO353_07325 - diadenosine tetraphosphatase, at 1,609,094 to 1,609,975
_07325
Position (kb)
1607
1608
1609 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1607.777 kb on - strand at 1607.789 kb on + strand at 1608.113 kb on + strand, within AO353_07315 at 1608.113 kb on + strand, within AO353_07315 at 1608.113 kb on + strand, within AO353_07315 at 1608.113 kb on + strand, within AO353_07315 at 1608.113 kb on + strand, within AO353_07315 at 1608.263 kb on + strand, within AO353_07315 at 1608.617 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.644 kb on - strand at 1608.644 kb on - strand at 1608.644 kb on - strand at 1608.644 kb on - strand at 1608.647 kb on - strand at 1608.662 kb on + strand at 1608.662 kb on + strand at 1608.662 kb on + strand at 1608.681 kb on + strand at 1608.682 kb on - strand at 1608.682 kb on - strand at 1608.682 kb on - strand at 1608.701 kb on + strand at 1608.701 kb on + strand at 1608.702 kb on - strand at 1608.807 kb on + strand, within AO353_07320 at 1608.807 kb on + strand, within AO353_07320 at 1608.807 kb on + strand, within AO353_07320 at 1608.807 kb on + strand, within AO353_07320 at 1608.807 kb on + strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.868 kb on + strand, within AO353_07320 at 1608.868 kb on + strand, within AO353_07320 at 1608.868 kb on + strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.873 kb on - strand, within AO353_07320 at 1608.873 kb on - strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1609.011 kb on + strand, within AO353_07320 at 1609.011 kb on + strand, within AO353_07320 at 1609.011 kb on + strand, within AO353_07320 at 1609.011 kb on + strand, within AO353_07320 at 1609.012 kb on - strand, within AO353_07320 at 1609.012 kb on - strand, within AO353_07320 at 1609.012 kb on - strand, within AO353_07320 at 1609.012 kb on - strand, within AO353_07320 at 1609.034 kb on + strand, within AO353_07320 at 1609.251 kb on - strand, within AO353_07325 at 1609.522 kb on - strand, within AO353_07325 at 1609.522 kb on - strand, within AO353_07325 at 1609.563 kb on - strand, within AO353_07325
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,607,777 - -0.6 1,607,789 + -0.3 1,608,113 + AO353_07315 0.41 -1.5 1,608,113 + AO353_07315 0.41 -1.9 1,608,113 + AO353_07315 0.41 -1.5 1,608,113 + AO353_07315 0.41 -3.1 1,608,113 + AO353_07315 0.41 -1.9 1,608,263 + AO353_07315 0.59 -0.3 1,608,617 + -1.3 1,608,643 + +0.9 1,608,643 + +1.6 1,608,643 + +2.3 1,608,643 + +0.0 1,608,643 + -2.0 1,608,643 + +0.0 1,608,644 - -0.2 1,608,644 - -0.7 1,608,644 - -0.3 1,608,644 - +0.9 1,608,647 - +1.3 1,608,662 + +0.0 1,608,662 + -0.4 1,608,662 + +0.3 1,608,681 + +1.3 1,608,682 - -0.1 1,608,682 - +0.1 1,608,682 - -0.7 1,608,701 + +0.6 1,608,701 + +1.1 1,608,702 - +0.7 1,608,807 + AO353_07320 0.24 -1.0 1,608,807 + AO353_07320 0.24 +0.7 1,608,807 + AO353_07320 0.24 +2.0 1,608,807 + AO353_07320 0.24 -0.3 1,608,807 + AO353_07320 0.24 -0.0 1,608,808 - AO353_07320 0.25 -1.5 1,608,808 - AO353_07320 0.25 -2.0 1,608,808 - AO353_07320 0.25 -1.3 1,608,808 - AO353_07320 0.25 -0.7 1,608,808 - AO353_07320 0.25 -0.2 1,608,808 - AO353_07320 0.25 -0.3 1,608,820 + AO353_07320 0.28 -0.1 1,608,820 + AO353_07320 0.28 -0.0 1,608,820 + AO353_07320 0.28 +0.3 1,608,820 + AO353_07320 0.28 -0.6 1,608,820 + AO353_07320 0.28 -2.5 1,608,820 + AO353_07320 0.28 +0.2 1,608,820 + AO353_07320 0.28 -1.2 1,608,820 + AO353_07320 0.28 +2.5 1,608,820 + AO353_07320 0.28 +0.8 1,608,820 + AO353_07320 0.28 -0.1 1,608,820 + AO353_07320 0.28 +1.1 1,608,821 - AO353_07320 0.28 -0.4 1,608,821 - AO353_07320 0.28 +0.3 1,608,821 - AO353_07320 0.28 -0.4 1,608,821 - AO353_07320 0.28 +0.6 1,608,821 - AO353_07320 0.28 -0.1 1,608,821 - AO353_07320 0.28 -1.6 1,608,821 - AO353_07320 0.28 +1.5 1,608,821 - AO353_07320 0.28 +0.1 1,608,821 - AO353_07320 0.28 +0.8 1,608,821 - AO353_07320 0.28 -0.2 1,608,824 + AO353_07320 0.29 +0.1 1,608,824 + AO353_07320 0.29 +0.6 1,608,824 + AO353_07320 0.29 -1.0 1,608,824 + AO353_07320 0.29 +0.3 1,608,824 + AO353_07320 0.29 +0.9 1,608,824 + AO353_07320 0.29 +0.4 1,608,824 + AO353_07320 0.29 +0.3 1,608,824 + AO353_07320 0.29 -1.3 1,608,824 + AO353_07320 0.29 -0.3 1,608,824 + AO353_07320 0.29 +0.8 1,608,824 + AO353_07320 0.29 +0.3 1,608,824 + AO353_07320 0.29 -0.2 1,608,825 - AO353_07320 0.29 +0.7 1,608,825 - AO353_07320 0.29 +0.1 1,608,825 - AO353_07320 0.29 +1.9 1,608,825 - AO353_07320 0.29 -0.8 1,608,825 - AO353_07320 0.29 +0.1 1,608,825 - AO353_07320 0.29 -0.0 1,608,825 - AO353_07320 0.29 -0.5 1,608,825 - AO353_07320 0.29 -1.3 1,608,825 - AO353_07320 0.29 -0.0 1,608,825 - AO353_07320 0.29 -0.1 1,608,825 - AO353_07320 0.29 +1.0 1,608,825 - AO353_07320 0.29 -1.7 1,608,868 + AO353_07320 0.40 -1.3 1,608,868 + AO353_07320 0.40 -1.0 1,608,868 + AO353_07320 0.40 -1.2 1,608,869 - AO353_07320 0.41 -0.9 1,608,869 - AO353_07320 0.41 -0.3 1,608,869 - AO353_07320 0.41 -3.2 1,608,869 - AO353_07320 0.41 -0.3 1,608,869 - AO353_07320 0.41 -1.3 1,608,873 - AO353_07320 0.42 -1.3 1,608,873 - AO353_07320 0.42 +1.3 1,608,960 + AO353_07320 0.65 +2.3 1,608,960 + AO353_07320 0.65 +0.8 1,608,960 + AO353_07320 0.65 +1.3 1,608,960 + AO353_07320 0.65 -0.1 1,608,960 + AO353_07320 0.65 +2.0 1,608,960 + AO353_07320 0.65 -0.3 1,608,960 + AO353_07320 0.65 -0.0 1,608,960 + AO353_07320 0.65 -1.9 1,608,960 + AO353_07320 0.65 -0.7 1,608,960 + AO353_07320 0.65 +2.9 1,608,961 - AO353_07320 0.65 +0.8 1,608,961 - AO353_07320 0.65 +0.3 1,608,961 - AO353_07320 0.65 +1.6 1,608,961 - AO353_07320 0.65 +0.0 1,608,961 - AO353_07320 0.65 -0.3 1,608,961 - AO353_07320 0.65 -0.2 1,608,961 - AO353_07320 0.65 -0.8 1,608,961 - AO353_07320 0.65 +0.3 1,608,961 - AO353_07320 0.65 +0.9 1,609,011 + AO353_07320 0.78 +0.3 1,609,011 + AO353_07320 0.78 -0.7 1,609,011 + AO353_07320 0.78 +1.6 1,609,011 + AO353_07320 0.78 -0.3 1,609,012 - AO353_07320 0.78 +1.3 1,609,012 - AO353_07320 0.78 -1.3 1,609,012 - AO353_07320 0.78 -0.1 1,609,012 - AO353_07320 0.78 -1.7 1,609,034 + AO353_07320 0.84 +1.3 1,609,251 - AO353_07325 0.18 +1.9 1,609,522 - AO353_07325 0.49 -1.5 1,609,522 - AO353_07325 0.49 -0.3 1,609,563 - AO353_07325 0.53 +0.3
Or see this region's nucleotide sequence