Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1273

Experiment: BG11

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11
1,296,170	+				+1.9
1,296,170	+				+1.2
1,296,170	+				-0.2
1,296,177	+				+0.1
1,296,256	-				+0.1
1,296,258	+				-1.2
1,296,276	-				-0.1
1,296,289	-		Synpcc7942_1272	0.10	+1.2
1,296,296	+		Synpcc7942_1272	0.12	+0.0
1,296,341	+		Synpcc7942_1272	0.20	+1.0
1,296,377	+		Synpcc7942_1272	0.27	+1.0
1,296,399	+		Synpcc7942_1272	0.31	-0.8
1,296,410	+		Synpcc7942_1272	0.33	+0.0
1,296,415	+		Synpcc7942_1272	0.34	+1.0
1,296,415	+		Synpcc7942_1272	0.34	-0.8
1,296,415	+		Synpcc7942_1272	0.34	-1.0
1,296,415	+		Synpcc7942_1272	0.34	+0.0
1,296,415	+		Synpcc7942_1272	0.34	-0.5
1,296,420	+		Synpcc7942_1272	0.35	+1.0
1,296,423	-		Synpcc7942_1272	0.36	-1.6
1,296,423	-		Synpcc7942_1272	0.36	+2.5
1,296,423	-		Synpcc7942_1272	0.36	+0.0
1,296,433	-		Synpcc7942_1272	0.38	+0.4
1,296,454	+		Synpcc7942_1272	0.42	+0.6
1,296,458	+		Synpcc7942_1272	0.42	+1.2
1,296,467	-		Synpcc7942_1272	0.44	-0.1
1,296,527	+		Synpcc7942_1272	0.55	-0.3
1,296,533	+		Synpcc7942_1272	0.57	-0.1
1,296,541	-		Synpcc7942_1272	0.58	+1.6
1,296,541	-		Synpcc7942_1272	0.58	+0.8
1,296,559	-		Synpcc7942_1272	0.62	+0.3
1,296,561	+		Synpcc7942_1272	0.62	+0.8
1,296,561	+		Synpcc7942_1272	0.62	-0.2
1,296,569	-		Synpcc7942_1272	0.63	-1.4
1,296,570	+		Synpcc7942_1272	0.64	+0.3
1,296,636	-		Synpcc7942_1272	0.76	-0.6
1,296,640	+		Synpcc7942_1272	0.77	-0.6
1,296,648	+		Synpcc7942_1272	0.78	-0.3
1,296,648	-		Synpcc7942_1272	0.78	-0.2
1,296,648	-		Synpcc7942_1272	0.78	+1.9
1,296,648	-		Synpcc7942_1272	0.78	-0.7
1,296,656	-		Synpcc7942_1272	0.80	+0.3
1,296,680	+		Synpcc7942_1272	0.84	-0.2
1,296,680	+		Synpcc7942_1272	0.84	+1.0
1,296,688	-		Synpcc7942_1272	0.86	+0.0
1,296,694	+		Synpcc7942_1272	0.87	+0.0
1,296,699	+		Synpcc7942_1272	0.88	+0.5
1,296,708	-		Synpcc7942_1272	0.90	+1.4
1,296,722	+				+1.1
1,296,748	-				+1.0
1,296,775	+				-0.2
1,296,775	+				+1.2
1,296,780	+				+1.2
1,296,783	-				+1.6
1,296,823	+				-1.4
1,296,823	+				+0.8
1,296,823	+				+1.3
1,296,823	+				-1.0
1,296,831	-				+0.4
1,296,831	-				-0.9
1,296,831	-				-0.7
1,296,831	-				-0.0
1,296,831	-				-0.1
1,296,892	+				+0.2
1,296,911	-				+0.2
1,296,921	-				-1.2
1,296,939	+				+2.0
1,296,946	-				-0.7
1,296,961	+				-1.0
1,296,971	+		Synpcc7942_1273	0.10	-0.5
1,297,004	-				-1.0
1,297,004	-		Synpcc7942_1273	0.12	-1.6
1,297,004	-		Synpcc7942_1273	0.12	-1.2
1,297,004	-		Synpcc7942_1273	0.12	-0.1
1,297,019	+		Synpcc7942_1273	0.13	-0.5
1,297,027	-		Synpcc7942_1273	0.14	+0.9
1,297,053	+		Synpcc7942_1273	0.16	-0.1
1,297,059	-		Synpcc7942_1273	0.16	-1.6
1,297,085	-		Synpcc7942_1273	0.18	+2.8
1,297,093	+		Synpcc7942_1273	0.18	+1.6
1,297,095	-		Synpcc7942_1273	0.18	+1.0
1,297,095	-		Synpcc7942_1273	0.18	+1.0
1,297,099	+		Synpcc7942_1273	0.19	+0.4
1,297,102	-		Synpcc7942_1273	0.19	+1.9
1,297,129	-		Synpcc7942_1273	0.21	-0.3
1,297,155	+		Synpcc7942_1273	0.22	+2.3
1,297,155	+		Synpcc7942_1273	0.22	+1.8
1,297,163	-		Synpcc7942_1273	0.23	-0.4
1,297,195	-		Synpcc7942_1273	0.25	+0.8
1,297,221	+		Synpcc7942_1273	0.27	-0.4
1,297,224	-		Synpcc7942_1273	0.27	+0.0
1,297,271	-		Synpcc7942_1273	0.30	-0.0
1,297,278	-		Synpcc7942_1273	0.30	-0.8
1,297,292	+		Synpcc7942_1273	0.31	-0.8
1,297,292	+		Synpcc7942_1273	0.31	-1.0
1,297,300	-		Synpcc7942_1273	0.32	-1.6
1,297,318	+		Synpcc7942_1273	0.33	-0.7
1,297,324	-		Synpcc7942_1273	0.33	+1.0
1,297,353	+		Synpcc7942_1273	0.35	+0.3
1,297,353	+		Synpcc7942_1273	0.35	+2.6
1,297,353	+		Synpcc7942_1273	0.35	+1.2
1,297,353	+		Synpcc7942_1273	0.35	+0.8
1,297,361	-		Synpcc7942_1273	0.36	+0.8
1,297,361	-		Synpcc7942_1273	0.36	+1.3
1,297,366	-		Synpcc7942_1273	0.36	+0.5
1,297,381	-		Synpcc7942_1273	0.37	+0.6
1,297,397	+		Synpcc7942_1273	0.38	-1.3
1,297,565	-		Synpcc7942_1273	0.49	-0.5
1,297,650	+		Synpcc7942_1273	0.55	+0.8
1,297,650	+		Synpcc7942_1273	0.55	-0.3
1,297,658	-		Synpcc7942_1273	0.55	+0.0
1,297,658	-		Synpcc7942_1273	0.55	+0.0
1,297,658	-		Synpcc7942_1273	0.55	-0.4
1,297,662	+		Synpcc7942_1273	0.55	-0.4
1,297,664	+		Synpcc7942_1273	0.55	-1.3
1,297,761	-		Synpcc7942_1273	0.62	-2.0
1,297,762	-		Synpcc7942_1273	0.62	+0.0
1,297,791	+		Synpcc7942_1273	0.64	+0.2
1,297,791	+		Synpcc7942_1273	0.64	+0.6
1,297,791	+		Synpcc7942_1273	0.64	+0.6
1,297,791	+		Synpcc7942_1273	0.64	+0.9
1,297,791	+		Synpcc7942_1273	0.64	+0.8
1,297,791	+		Synpcc7942_1273	0.64	+0.3
1,297,791	+		Synpcc7942_1273	0.64	-1.7
1,297,791	+		Synpcc7942_1273	0.64	-0.3
1,297,798	+		Synpcc7942_1273	0.64	-1.2
1,297,799	-		Synpcc7942_1273	0.64	-0.5
1,297,799	-		Synpcc7942_1273	0.64	-0.2
1,297,799	-		Synpcc7942_1273	0.64	-0.9
1,297,799	-		Synpcc7942_1273	0.64	+0.6
1,297,799	-		Synpcc7942_1273	0.64	-1.0
1,297,799	-		Synpcc7942_1273	0.64	+0.7
1,297,803	+		Synpcc7942_1273	0.65	-0.4
1,297,826	+		Synpcc7942_1273	0.66	-0.5
1,297,826	+		Synpcc7942_1273	0.66	+1.0
1,297,826	+		Synpcc7942_1273	0.66	-1.0
1,297,826	+		Synpcc7942_1273	0.66	-0.7
1,297,831	+		Synpcc7942_1273	0.66	-0.4
1,297,831	+		Synpcc7942_1273	0.66	+0.7
1,297,834	-		Synpcc7942_1273	0.67	-0.6
1,297,834	-		Synpcc7942_1273	0.67	-1.0
1,297,836	+		Synpcc7942_1273	0.67	-1.4
1,297,848	+		Synpcc7942_1273	0.67	+1.9
1,297,848	+		Synpcc7942_1273	0.67	-0.2
1,297,858	+		Synpcc7942_1273	0.68	-0.7
1,297,864	+		Synpcc7942_1273	0.68	-0.1
1,297,890	+		Synpcc7942_1273	0.70	-1.6
1,297,906	+		Synpcc7942_1273	0.71	-0.2
1,297,911	+		Synpcc7942_1273	0.72	-0.9
1,297,925	+		Synpcc7942_1273	0.72	-0.6
1,297,930	+		Synpcc7942_1273	0.73	-1.0
1,297,930	+		Synpcc7942_1273	0.73	-1.0
1,297,930	+		Synpcc7942_1273	0.73	+0.6
1,297,938	-		Synpcc7942_1273	0.73	+0.2
1,297,938	-		Synpcc7942_1273	0.73	-0.6
1,297,938	-		Synpcc7942_1273	0.73	-0.7
1,297,949	-		Synpcc7942_1273	0.74	+0.8
1,297,958	+		Synpcc7942_1273	0.75	+1.6
1,297,983	-		Synpcc7942_1273	0.76	-1.8
1,297,985	+		Synpcc7942_1273	0.76	-0.7
1,297,985	+		Synpcc7942_1273	0.76	+1.6
1,298,003	-		Synpcc7942_1273	0.78	-2.0
1,298,013	-		Synpcc7942_1273	0.78	+2.0
1,298,028	+		Synpcc7942_1273	0.79	+0.0
1,298,036	-		Synpcc7942_1273	0.80	+0.2
1,298,037	-		Synpcc7942_1273	0.80	+1.6
1,298,052	-		Synpcc7942_1273	0.81	-0.5
1,298,055	+		Synpcc7942_1273	0.81	+0.1
1,298,065	+		Synpcc7942_1273	0.82	-1.4
1,298,092	-		Synpcc7942_1273	0.83	-0.2
1,298,092	-		Synpcc7942_1273	0.83	+0.0
1,298,101	+		Synpcc7942_1273	0.84	-1.0
1,298,133	+		Synpcc7942_1273	0.86	-1.0
1,298,138	+		Synpcc7942_1273	0.86	+0.7
1,298,138	+		Synpcc7942_1273	0.86	+1.0
1,298,141	-		Synpcc7942_1273	0.87	+0.0
1,298,146	-		Synpcc7942_1273	0.87	-0.6
1,298,204	+				+0.6
1,298,223	+				+0.2
1,298,225	+				+1.0
1,298,250	-				+0.5
1,298,250	-				+0.3
1,298,260	-				+0.0
1,298,260	-				-0.3
1,298,340	-				-0.2
1,298,355	+				+0.2
1,298,355	+				+0.0
1,298,355	+				-1.5
1,298,355	+				+0.4
1,298,355	+				+0.0
1,298,355	+				+0.4
1,298,363	-				+0.6
1,298,363	-				-0.4
1,298,363	-				-2.8
1,298,363	-				-0.6
1,298,363	-				-1.0
1,298,363	-				+0.7
1,298,375	+				-0.3
1,298,383	-				+0.6
1,298,403	+				-2.3
1,298,482	-				-0.2
1,298,503	-				-0.1
1,298,503	-				+0.0
1,298,503	-				+1.0
1,298,503	-				-0.1
1,298,543	+				+0.4
1,298,553	-				+0.4
1,298,566	+				+0.3
1,298,593	-				-1.1
1,298,610	+				+1.0
1,298,635	-				+1.2
1,298,635	-				-1.0
1,298,661	-				+0.1
1,298,661	-				-0.4
1,299,223	+				-1.0
1,299,265	-				-0.3
1,299,283	+				-1.1
1,299,291	-				-0.1
1,299,291	-				+0.7
1,299,338	-		Synpcc7942_1275	0.13	-2.8