Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0953

Experiment: BG11

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11
960,752	-				-0.7
960,767	-				+0.9
960,802	-				-0.4
960,818	+				-0.6
960,818	+				-0.9
960,826	+				+0.7
960,826	+				-0.2
960,834	-				+1.9
960,891	+				+0.7
960,892	-				-2.3
960,895	+				+0.4
960,905	-				+1.1
961,003	-		Synpcc7942_0952	0.22	+0.1
961,024	-		Synpcc7942_0952	0.25	-2.1
961,051	+		Synpcc7942_0952	0.28	-0.3
961,093	-		Synpcc7942_0952	0.33	+1.1
961,118	+		Synpcc7942_0952	0.36	-1.2
961,128	+		Synpcc7942_0952	0.38	+1.1
961,149	+		Synpcc7942_0952	0.40	-0.5
961,149	+		Synpcc7942_0952	0.40	-0.4
961,153	+		Synpcc7942_0952	0.41	+0.2
961,157	-		Synpcc7942_0952	0.41	-0.3
961,157	-		Synpcc7942_0952	0.41	+1.7
961,227	-		Synpcc7942_0952	0.50	-0.3
961,237	+		Synpcc7942_0952	0.52	-1.5
961,333	+		Synpcc7942_0952	0.64	+0.9
961,349	-		Synpcc7942_0952	0.66	-0.6
961,367	+		Synpcc7942_0952	0.68	-0.1
961,375	-		Synpcc7942_0952	0.69	-0.1
961,415	-		Synpcc7942_0952	0.74	+0.2
961,447	+		Synpcc7942_0952	0.78	-0.7
961,452	+		Synpcc7942_0952	0.79	-1.0
961,474	-		Synpcc7942_0952	0.81	+0.7
961,484	-		Synpcc7942_0952	0.83	+0.7
961,488	+				-0.7
961,511	-		Synpcc7942_0952	0.86	+2.2
961,537	-		Synpcc7942_0952	0.89	-1.3
961,564	+				+1.5
961,564	+				+0.6
961,564	+				-2.3
961,566	-				+0.1
961,567	-				+0.8
961,572	-				+0.6
961,572	-				+1.3
961,574	-				+2.3
961,594	-				+1.1
961,594	-				-0.9
961,594	-				+0.1
961,601	+				+1.2
961,715	-				-0.9
961,789	+				-0.2
961,801	-				+0.1
961,816	-		Synpcc7942_0953	0.15	+1.9
961,843	-		Synpcc7942_0953	0.21	-1.7
961,887	-		Synpcc7942_0953	0.31	+1.7
961,951	-		Synpcc7942_0953	0.45	+0.1
961,976	+		Synpcc7942_0953	0.50	-0.7
961,986	+		Synpcc7942_0953	0.52	-1.9
962,000	-		Synpcc7942_0953	0.55	+1.1
962,001	+		Synpcc7942_0953	0.55	-0.9
962,048	+		Synpcc7942_0953	0.65	+0.7
962,048	+		Synpcc7942_0953	0.65	-0.4
962,048	+		Synpcc7942_0953	0.65	-1.4
962,056	-		Synpcc7942_0953	0.67	-0.9
962,056	-		Synpcc7942_0953	0.67	+1.7
962,056	-		Synpcc7942_0953	0.67	-0.7
962,056	-		Synpcc7942_0953	0.67	+1.5
962,056	-		Synpcc7942_0953	0.67	+1.1
962,056	-		Synpcc7942_0953	0.67	+0.9
962,090	-		Synpcc7942_0953	0.74	-1.2
962,092	-		Synpcc7942_0953	0.75	+0.1
962,146	-		Synpcc7942_0953	0.86	-3.7
962,175	-				+0.4
962,189	-				+0.4
962,204	+				+0.1
962,204	+				-2.5
962,204	+				-0.6
962,204	+				+0.4
962,205	-				+0.1
962,212	-				-0.2
962,212	-				-0.1
962,216	+				+2.1
962,236	+				+1.1
962,242	+				+2.1
962,242	-				+1.2
962,242	-				-3.5
962,249	-				+0.5
962,285	-				+0.1
962,316	-				+0.3
962,319	-				-0.2
962,353	+				-0.0
962,353	+				+0.1
962,361	-				+0.2
962,386	-		Synpcc7942_0954	0.12	+0.5
962,386	-		Synpcc7942_0954	0.12	-0.2
962,434	+		Synpcc7942_0954	0.16	-0.2
962,434	+		Synpcc7942_0954	0.16	-0.7
962,442	-		Synpcc7942_0954	0.17	+0.6
962,442	-		Synpcc7942_0954	0.17	-0.9
962,468	-		Synpcc7942_0954	0.20	+0.1
962,500	-		Synpcc7942_0954	0.23	-2.7
962,503	+		Synpcc7942_0954	0.23	-0.1
962,510	+		Synpcc7942_0954	0.24	+0.5
962,510	+		Synpcc7942_0954	0.24	-0.4
962,524	+		Synpcc7942_0954	0.25	+0.6
962,531	-		Synpcc7942_0954	0.26	+0.3
962,539	-		Synpcc7942_0954	0.26	-1.5
962,548	-		Synpcc7942_0954	0.27	+0.7
962,548	-		Synpcc7942_0954	0.27	-1.5
962,572	+		Synpcc7942_0954	0.30	-0.8
962,590	+		Synpcc7942_0954	0.31	+0.5
962,598	-		Synpcc7942_0954	0.32	-0.1
962,599	-		Synpcc7942_0954	0.32	+0.9
962,624	+		Synpcc7942_0954	0.35	-0.8
962,631	-		Synpcc7942_0954	0.35	-0.1
962,656	+		Synpcc7942_0954	0.38	+0.6
962,670	-		Synpcc7942_0954	0.39	+0.7
962,689	-		Synpcc7942_0954	0.41	+3.4
962,699	-		Synpcc7942_0954	0.42	+2.8
962,741	+		Synpcc7942_0954	0.46	-0.5
962,741	+		Synpcc7942_0954	0.46	-0.8
962,749	-		Synpcc7942_0954	0.47	+0.5
962,749	-		Synpcc7942_0954	0.47	-0.2
962,749	-		Synpcc7942_0954	0.47	+0.5
962,755	-		Synpcc7942_0954	0.47	+0.1
962,759	+		Synpcc7942_0954	0.48	-1.2
962,766	+		Synpcc7942_0954	0.48	-0.3
962,792	+		Synpcc7942_0954	0.51	+0.8
962,793	-		Synpcc7942_0954	0.51	+1.5
962,798	-		Synpcc7942_0954	0.51	+0.2
962,799	+		Synpcc7942_0954	0.51	+0.3
962,799	+		Synpcc7942_0954	0.51	-0.9
962,807	-		Synpcc7942_0954	0.52	+1.2
962,814	-		Synpcc7942_0954	0.53	+0.1
962,825	+		Synpcc7942_0954	0.54	+0.5
962,864	+		Synpcc7942_0954	0.58	+0.2
962,928	+		Synpcc7942_0954	0.64	+0.1
962,928	+		Synpcc7942_0954	0.64	+0.5
962,928	-		Synpcc7942_0954	0.64	-0.5
962,928	-		Synpcc7942_0954	0.64	+0.5
962,964	+		Synpcc7942_0954	0.67	-0.6
962,969	+		Synpcc7942_0954	0.68	+0.1
963,006	-		Synpcc7942_0954	0.71	-0.7
963,028	-		Synpcc7942_0954	0.74	-0.2
963,031	+		Synpcc7942_0954	0.74	+0.3
963,041	-		Synpcc7942_0954	0.75	-2.5
963,041	-		Synpcc7942_0954	0.75	+0.5
963,049	-		Synpcc7942_0954	0.76	+0.1
963,049	-		Synpcc7942_0954	0.76	+1.4
963,094	+		Synpcc7942_0954	0.80	+0.6
963,097	-		Synpcc7942_0954	0.80	+0.6
963,112	+		Synpcc7942_0954	0.82	-0.7
963,147	-		Synpcc7942_0954	0.85	+0.9
963,154	-		Synpcc7942_0954	0.86	-0.3
963,157	-		Synpcc7942_0954	0.86	+1.1
963,159	+		Synpcc7942_0954	0.86	+0.4
963,192	+		Synpcc7942_0954	0.89	+1.1
963,200	+				+1.9
963,208	-				-0.5