Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27565

Experiment: D-Raffinose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS27555 and BWI76_RS27560 are separated by 50 nucleotidesBWI76_RS27560 and BWI76_RS27565 are separated by 80 nucleotidesBWI76_RS27565 and BWI76_RS27570 are separated by 11 nucleotides BWI76_RS27555: BWI76_RS27555 - putative sugar kinase/transcriptional regulator, ATPase domain protein, at 5,719,818 to 5,720,750 _RS27555 BWI76_RS27560: BWI76_RS27560 - hypothetical protein, at 5,720,801 to 5,721,661 _RS27560 BWI76_RS27565: BWI76_RS27565 - sugar aldolase, at 5,721,742 to 5,722,593 _RS27565 BWI76_RS27570: BWI76_RS27570 - phosphotransferase system, fructose-specific IIC component, at 5,722,605 to 5,723,696 _RS27570 Position (kb) 5721 5722 5723Strain fitness (log2 ratio) -2 -1 0 1 2at 5720.755 kb on + strandat 5720.803 kb on + strandat 5720.804 kb on + strandat 5720.807 kb on - strandat 5720.811 kb on - strandat 5720.899 kb on + strand, within BWI76_RS27560at 5721.270 kb on + strand, within BWI76_RS27560at 5721.325 kb on - strand, within BWI76_RS27560at 5721.371 kb on + strand, within BWI76_RS27560at 5721.371 kb on + strand, within BWI76_RS27560at 5721.388 kb on - strand, within BWI76_RS27560at 5721.393 kb on - strand, within BWI76_RS27560at 5721.447 kb on + strand, within BWI76_RS27560at 5721.457 kb on + strand, within BWI76_RS27560at 5721.579 kb on - strandat 5721.579 kb on - strandat 5721.693 kb on - strandat 5721.708 kb on - strandat 5721.794 kb on + strandat 5721.807 kb on - strandat 5721.857 kb on + strandat 5721.857 kb on - strand, within BWI76_RS27565at 5721.867 kb on - strand, within BWI76_RS27565at 5721.968 kb on - strand, within BWI76_RS27565at 5722.035 kb on + strand, within BWI76_RS27565at 5722.056 kb on - strand, within BWI76_RS27565at 5722.094 kb on + strand, within BWI76_RS27565at 5722.102 kb on - strand, within BWI76_RS27565at 5722.102 kb on - strand, within BWI76_RS27565at 5722.102 kb on - strand, within BWI76_RS27565at 5722.220 kb on - strand, within BWI76_RS27565at 5722.307 kb on - strand, within BWI76_RS27565at 5722.340 kb on + strand, within BWI76_RS27565at 5722.350 kb on + strand, within BWI76_RS27565at 5722.450 kb on - strand, within BWI76_RS27565at 5722.871 kb on - strand, within BWI76_RS27570at 5722.883 kb on + strand, within BWI76_RS27570at 5722.947 kb on + strand, within BWI76_RS27570at 5723.193 kb on - strand, within BWI76_RS27570at 5723.206 kb on - strand, within BWI76_RS27570at 5723.348 kb on + strand, within BWI76_RS27570at 5723.366 kb on - strand, within BWI76_RS27570at 5723.366 kb on - strand, within BWI76_RS27570at 5723.378 kb on + strand, within BWI76_RS27570at 5723.415 kb on + strand, within BWI76_RS27570at 5723.436 kb on - strand, within BWI76_RS27570at 5723.479 kb on + strand, within BWI76_RS27570at 5723.479 kb on + strand, within BWI76_RS27570at 5723.484 kb on + strand, within BWI76_RS27570at 5723.484 kb on + strand, within BWI76_RS27570at 5723.484 kb on + strand, within BWI76_RS27570at 5723.484 kb on + strand, within BWI76_RS27570at 5723.484 kb on + strand, within BWI76_RS27570at 5723.492 kb on - strand, within BWI76_RS27570at 5723.492 kb on - strand, within BWI76_RS27570at 5723.492 kb on - strand, within BWI76_RS27570at 5723.492 kb on - strand, within BWI76_RS27570at 5723.492 kb on - strand, within BWI76_RS27570at 5723.492 kb on - strand, within BWI76_RS27570at 5723.504 kb on - strand, within BWI76_RS27570at 5723.504 kb on - strand, within BWI76_RS27570at 5723.548 kb on - strand, within BWI76_RS27570at 5723.552 kb on - strand, within BWI76_RS27570at 5723.574 kb on + strand, within BWI76_RS27570at 5723.579 kb on + strand, within BWI76_RS27570at 5723.581 kb on - strand, within BWI76_RS27570at 5723.582 kb on - strand, within BWI76_RS27570at 5723.582 kb on - strand, within BWI76_RS27570at 5723.582 kb on - strand, within BWI76_RS27570at 5723.582 kb on - strand, within BWI76_RS27570at 5723.587 kb on - strandat 5723.587 kb on - strandat 5723.591 kb on + strandat 5723.593 kb on - strandat 5723.593 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Raffinose (C)
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5,720,755 + +0.6
5,720,803 + -0.0
5,720,804 + -0.7
5,720,807 - +0.1
5,720,811 - +0.1
5,720,899 + BWI76_RS27560 0.11 -1.3
5,721,270 + BWI76_RS27560 0.54 -1.5
5,721,325 - BWI76_RS27560 0.61 -0.5
5,721,371 + BWI76_RS27560 0.66 +0.1
5,721,371 + BWI76_RS27560 0.66 -2.1
5,721,388 - BWI76_RS27560 0.68 +0.3
5,721,393 - BWI76_RS27560 0.69 +1.1
5,721,447 + BWI76_RS27560 0.75 +0.1
5,721,457 + BWI76_RS27560 0.76 +0.0
5,721,579 - -0.3
5,721,579 - -0.9
5,721,693 - +0.2
5,721,708 - +0.2
5,721,794 + +0.2
5,721,807 - +0.3
5,721,857 + +0.7
5,721,857 - BWI76_RS27565 0.13 +0.1
5,721,867 - BWI76_RS27565 0.15 -0.2
5,721,968 - BWI76_RS27565 0.27 +1.3
5,722,035 + BWI76_RS27565 0.34 -0.5
5,722,056 - BWI76_RS27565 0.37 -1.7
5,722,094 + BWI76_RS27565 0.41 -0.1
5,722,102 - BWI76_RS27565 0.42 +1.2
5,722,102 - BWI76_RS27565 0.42 +0.5
5,722,102 - BWI76_RS27565 0.42 +0.2
5,722,220 - BWI76_RS27565 0.56 -0.8
5,722,307 - BWI76_RS27565 0.66 -0.3
5,722,340 + BWI76_RS27565 0.70 +1.3
5,722,350 + BWI76_RS27565 0.71 +0.2
5,722,450 - BWI76_RS27565 0.83 +0.2
5,722,871 - BWI76_RS27570 0.24 -0.3
5,722,883 + BWI76_RS27570 0.25 +0.3
5,722,947 + BWI76_RS27570 0.31 +0.3
5,723,193 - BWI76_RS27570 0.54 +0.1
5,723,206 - BWI76_RS27570 0.55 +0.6
5,723,348 + BWI76_RS27570 0.68 +0.1
5,723,366 - BWI76_RS27570 0.70 +1.4
5,723,366 - BWI76_RS27570 0.70 +0.4
5,723,378 + BWI76_RS27570 0.71 +0.0
5,723,415 + BWI76_RS27570 0.74 +1.5
5,723,436 - BWI76_RS27570 0.76 -0.4
5,723,479 + BWI76_RS27570 0.80 -2.3
5,723,479 + BWI76_RS27570 0.80 -1.4
5,723,484 + BWI76_RS27570 0.80 -0.8
5,723,484 + BWI76_RS27570 0.80 -0.7
5,723,484 + BWI76_RS27570 0.80 -0.2
5,723,484 + BWI76_RS27570 0.80 +2.5
5,723,484 + BWI76_RS27570 0.80 +1.3
5,723,492 - BWI76_RS27570 0.81 -0.1
5,723,492 - BWI76_RS27570 0.81 +0.4
5,723,492 - BWI76_RS27570 0.81 +0.1
5,723,492 - BWI76_RS27570 0.81 -1.3
5,723,492 - BWI76_RS27570 0.81 -0.2
5,723,492 - BWI76_RS27570 0.81 -0.3
5,723,504 - BWI76_RS27570 0.82 -1.2
5,723,504 - BWI76_RS27570 0.82 -0.2
5,723,548 - BWI76_RS27570 0.86 +0.3
5,723,552 - BWI76_RS27570 0.87 -0.3
5,723,574 + BWI76_RS27570 0.89 +0.8
5,723,579 + BWI76_RS27570 0.89 -1.0
5,723,581 - BWI76_RS27570 0.89 +0.6
5,723,582 - BWI76_RS27570 0.89 +0.8
5,723,582 - BWI76_RS27570 0.89 +0.1
5,723,582 - BWI76_RS27570 0.89 +0.5
5,723,582 - BWI76_RS27570 0.89 +0.6
5,723,587 - -0.5
5,723,587 - +1.2
5,723,591 + +0.6
5,723,593 - -0.1
5,723,593 - +0.6

Or see this region's nucleotide sequence