Experiment: D-Raffinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27270 and BWI76_RS27275 overlap by 1 nucleotides BWI76_RS27275 and BWI76_RS27280 overlap by 23 nucleotides BWI76_RS27280 and BWI76_RS27285 are separated by 35 nucleotides
BWI76_RS27270: BWI76_RS27270 - ADP-heptose--LPS heptosyl transferase I, at 5,659,925 to 5,660,896
_RS27270
BWI76_RS27275: BWI76_RS27275 - hypothetical protein, at 5,660,896 to 5,661,804
_RS27275
BWI76_RS27280: BWI76_RS27280 - polymerase, at 5,661,782 to 5,662,948
_RS27280
BWI76_RS27285: BWI76_RS27285 - glycosyl transferase family protein, at 5,662,984 to 5,664,066
_RS27285
Position (kb) 5661
5662
5663 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5660.898 kb on - strand at 5660.979 kb on + strand at 5661.090 kb on - strand, within BWI76_RS27275 at 5661.167 kb on - strand, within BWI76_RS27275 at 5661.293 kb on - strand, within BWI76_RS27275 at 5661.334 kb on + strand, within BWI76_RS27275 at 5661.444 kb on - strand, within BWI76_RS27275 at 5661.527 kb on - strand, within BWI76_RS27275 at 5661.527 kb on - strand, within BWI76_RS27275 at 5661.527 kb on - strand, within BWI76_RS27275 at 5661.560 kb on - strand, within BWI76_RS27275 at 5661.570 kb on - strand, within BWI76_RS27275 at 5661.619 kb on + strand, within BWI76_RS27275 at 5661.689 kb on + strand, within BWI76_RS27275 at 5661.820 kb on - strand at 5661.936 kb on - strand, within BWI76_RS27280 at 5661.982 kb on + strand, within BWI76_RS27280 at 5662.007 kb on + strand, within BWI76_RS27280 at 5662.014 kb on + strand, within BWI76_RS27280 at 5662.158 kb on - strand, within BWI76_RS27280 at 5662.171 kb on - strand, within BWI76_RS27280 at 5662.191 kb on - strand, within BWI76_RS27280 at 5662.248 kb on - strand, within BWI76_RS27280 at 5662.431 kb on + strand, within BWI76_RS27280 at 5662.439 kb on - strand, within BWI76_RS27280 at 5662.529 kb on - strand, within BWI76_RS27280 at 5662.584 kb on - strand, within BWI76_RS27280 at 5662.646 kb on + strand, within BWI76_RS27280 at 5662.712 kb on + strand, within BWI76_RS27280 at 5662.714 kb on + strand, within BWI76_RS27280 at 5662.902 kb on - strand at 5662.916 kb on + strand at 5663.075 kb on - strand at 5663.232 kb on + strand, within BWI76_RS27285 at 5663.303 kb on + strand, within BWI76_RS27285 at 5663.374 kb on - strand, within BWI76_RS27285 at 5663.374 kb on - strand, within BWI76_RS27285 at 5663.418 kb on - strand, within BWI76_RS27285 at 5663.444 kb on + strand, within BWI76_RS27285 at 5663.464 kb on - strand, within BWI76_RS27285 at 5663.466 kb on + strand, within BWI76_RS27285 at 5663.472 kb on - strand, within BWI76_RS27285 at 5663.483 kb on + strand, within BWI76_RS27285 at 5663.491 kb on - strand, within BWI76_RS27285 at 5663.520 kb on + strand, within BWI76_RS27285 at 5663.520 kb on + strand, within BWI76_RS27285 at 5663.520 kb on + strand, within BWI76_RS27285 at 5663.528 kb on - strand, within BWI76_RS27285 at 5663.528 kb on - strand, within BWI76_RS27285 at 5663.541 kb on + strand, within BWI76_RS27285 at 5663.541 kb on + strand, within BWI76_RS27285 at 5663.541 kb on + strand, within BWI76_RS27285 at 5663.541 kb on + strand, within BWI76_RS27285 at 5663.541 kb on + strand, within BWI76_RS27285 at 5663.541 kb on + strand, within BWI76_RS27285 at 5663.541 kb on + strand, within BWI76_RS27285 at 5663.541 kb on + strand, within BWI76_RS27285 at 5663.546 kb on + strand, within BWI76_RS27285 at 5663.549 kb on - strand, within BWI76_RS27285 at 5663.549 kb on - strand, within BWI76_RS27285 at 5663.554 kb on - strand, within BWI76_RS27285 at 5663.567 kb on + strand, within BWI76_RS27285 at 5663.567 kb on + strand, within BWI76_RS27285 at 5663.567 kb on + strand, within BWI76_RS27285 at 5663.567 kb on + strand, within BWI76_RS27285 at 5663.567 kb on + strand, within BWI76_RS27285 at 5663.575 kb on - strand, within BWI76_RS27285 at 5663.575 kb on - strand, within BWI76_RS27285 at 5663.575 kb on - strand, within BWI76_RS27285 at 5663.575 kb on - strand, within BWI76_RS27285 at 5663.701 kb on + strand, within BWI76_RS27285 at 5663.701 kb on + strand at 5663.701 kb on + strand, within BWI76_RS27285 at 5663.703 kb on - strand, within BWI76_RS27285 at 5663.709 kb on - strand, within BWI76_RS27285 at 5663.730 kb on + strand, within BWI76_RS27285 at 5663.730 kb on + strand, within BWI76_RS27285 at 5663.738 kb on - strand, within BWI76_RS27285 at 5663.780 kb on + strand, within BWI76_RS27285 at 5663.788 kb on - strand, within BWI76_RS27285 at 5663.788 kb on - strand, within BWI76_RS27285 at 5663.788 kb on - strand, within BWI76_RS27285 at 5663.788 kb on - strand, within BWI76_RS27285 at 5663.788 kb on - strand, within BWI76_RS27285 at 5663.809 kb on + strand, within BWI76_RS27285 at 5663.828 kb on - strand, within BWI76_RS27285 at 5663.844 kb on - strand, within BWI76_RS27285 at 5663.849 kb on - strand, within BWI76_RS27285 at 5663.850 kb on + strand, within BWI76_RS27285 at 5663.858 kb on - strand, within BWI76_RS27285 at 5663.858 kb on - strand, within BWI76_RS27285 at 5663.858 kb on - strand, within BWI76_RS27285 at 5663.867 kb on + strand, within BWI76_RS27285 at 5663.867 kb on + strand, within BWI76_RS27285 at 5663.867 kb on + strand, within BWI76_RS27285 at 5663.867 kb on + strand, within BWI76_RS27285 at 5663.875 kb on - strand, within BWI76_RS27285 at 5663.875 kb on - strand, within BWI76_RS27285 at 5663.875 kb on - strand, within BWI76_RS27285 at 5663.899 kb on - strand, within BWI76_RS27285 at 5663.904 kb on + strand, within BWI76_RS27285 at 5663.910 kb on - strand, within BWI76_RS27285
Per-strain Table
Position Strand Gene LocusTag Fraction D-Raffinose (C) remove 5,660,898 - +0.2 5,660,979 + -1.0 5,661,090 - BWI76_RS27275 0.21 -1.8 5,661,167 - BWI76_RS27275 0.30 -2.9 5,661,293 - BWI76_RS27275 0.44 -1.6 5,661,334 + BWI76_RS27275 0.48 +0.6 5,661,444 - BWI76_RS27275 0.60 -2.0 5,661,527 - BWI76_RS27275 0.69 -2.9 5,661,527 - BWI76_RS27275 0.69 +0.1 5,661,527 - BWI76_RS27275 0.69 -1.4 5,661,560 - BWI76_RS27275 0.73 -1.3 5,661,570 - BWI76_RS27275 0.74 -3.0 5,661,619 + BWI76_RS27275 0.80 -1.3 5,661,689 + BWI76_RS27275 0.87 -1.3 5,661,820 - -0.9 5,661,936 - BWI76_RS27280 0.13 -1.7 5,661,982 + BWI76_RS27280 0.17 -0.3 5,662,007 + BWI76_RS27280 0.19 -2.0 5,662,014 + BWI76_RS27280 0.20 -1.5 5,662,158 - BWI76_RS27280 0.32 -1.8 5,662,171 - BWI76_RS27280 0.33 -1.6 5,662,191 - BWI76_RS27280 0.35 -2.6 5,662,248 - BWI76_RS27280 0.40 -3.1 5,662,431 + BWI76_RS27280 0.56 -1.8 5,662,439 - BWI76_RS27280 0.56 -2.5 5,662,529 - BWI76_RS27280 0.64 -2.1 5,662,584 - BWI76_RS27280 0.69 -0.6 5,662,646 + BWI76_RS27280 0.74 -1.6 5,662,712 + BWI76_RS27280 0.80 -2.6 5,662,714 + BWI76_RS27280 0.80 -2.7 5,662,902 - -2.3 5,662,916 + +0.6 5,663,075 - +1.3 5,663,232 + BWI76_RS27285 0.23 -0.6 5,663,303 + BWI76_RS27285 0.29 -0.6 5,663,374 - BWI76_RS27285 0.36 -1.0 5,663,374 - BWI76_RS27285 0.36 +0.5 5,663,418 - BWI76_RS27285 0.40 +1.3 5,663,444 + BWI76_RS27285 0.42 -0.3 5,663,464 - BWI76_RS27285 0.44 -0.2 5,663,466 + BWI76_RS27285 0.45 -0.8 5,663,472 - BWI76_RS27285 0.45 +0.7 5,663,483 + BWI76_RS27285 0.46 -0.8 5,663,491 - BWI76_RS27285 0.47 +1.6 5,663,520 + BWI76_RS27285 0.49 +0.3 5,663,520 + BWI76_RS27285 0.49 -0.2 5,663,520 + BWI76_RS27285 0.49 -0.4 5,663,528 - BWI76_RS27285 0.50 -0.4 5,663,528 - BWI76_RS27285 0.50 -0.3 5,663,541 + BWI76_RS27285 0.51 +1.2 5,663,541 + BWI76_RS27285 0.51 -0.0 5,663,541 + BWI76_RS27285 0.51 -0.3 5,663,541 + BWI76_RS27285 0.51 -0.2 5,663,541 + BWI76_RS27285 0.51 +0.6 5,663,541 + BWI76_RS27285 0.51 -0.0 5,663,541 + BWI76_RS27285 0.51 -0.8 5,663,541 + BWI76_RS27285 0.51 -0.0 5,663,546 + BWI76_RS27285 0.52 +0.1 5,663,549 - BWI76_RS27285 0.52 -0.5 5,663,549 - BWI76_RS27285 0.52 +0.1 5,663,554 - BWI76_RS27285 0.53 -0.0 5,663,567 + BWI76_RS27285 0.54 -0.5 5,663,567 + BWI76_RS27285 0.54 +1.0 5,663,567 + BWI76_RS27285 0.54 +2.2 5,663,567 + BWI76_RS27285 0.54 -0.2 5,663,567 + BWI76_RS27285 0.54 -0.5 5,663,575 - BWI76_RS27285 0.55 -0.7 5,663,575 - BWI76_RS27285 0.55 +1.9 5,663,575 - BWI76_RS27285 0.55 +0.2 5,663,575 - BWI76_RS27285 0.55 -0.5 5,663,701 + BWI76_RS27285 0.66 +1.1 5,663,701 + +1.3 5,663,701 + BWI76_RS27285 0.66 +0.1 5,663,703 - BWI76_RS27285 0.66 +0.2 5,663,709 - BWI76_RS27285 0.67 +0.3 5,663,730 + BWI76_RS27285 0.69 -0.7 5,663,730 + BWI76_RS27285 0.69 +1.5 5,663,738 - BWI76_RS27285 0.70 -2.0 5,663,780 + BWI76_RS27285 0.73 -0.3 5,663,788 - BWI76_RS27285 0.74 +0.5 5,663,788 - BWI76_RS27285 0.74 -0.1 5,663,788 - BWI76_RS27285 0.74 -0.7 5,663,788 - BWI76_RS27285 0.74 -0.5 5,663,788 - BWI76_RS27285 0.74 -0.0 5,663,809 + BWI76_RS27285 0.76 -0.1 5,663,828 - BWI76_RS27285 0.78 -0.6 5,663,844 - BWI76_RS27285 0.79 +0.0 5,663,849 - BWI76_RS27285 0.80 -0.2 5,663,850 + BWI76_RS27285 0.80 +0.0 5,663,858 - BWI76_RS27285 0.81 -0.3 5,663,858 - BWI76_RS27285 0.81 -0.7 5,663,858 - BWI76_RS27285 0.81 -0.3 5,663,867 + BWI76_RS27285 0.82 +0.2 5,663,867 + BWI76_RS27285 0.82 -0.3 5,663,867 + BWI76_RS27285 0.82 -0.2 5,663,867 + BWI76_RS27285 0.82 -0.3 5,663,875 - BWI76_RS27285 0.82 +0.4 5,663,875 - BWI76_RS27285 0.82 +1.1 5,663,875 - BWI76_RS27285 0.82 -1.4 5,663,899 - BWI76_RS27285 0.84 +0.4 5,663,904 + BWI76_RS27285 0.85 +0.0 5,663,910 - BWI76_RS27285 0.86 +0.0
Or see this region's nucleotide sequence