Experiment: D-Raffinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26695 and BWI76_RS26700 are separated by 266 nucleotides BWI76_RS26700 and BWI76_RS26705 are separated by 68 nucleotides BWI76_RS26705 and BWI76_RS26710 are separated by 75 nucleotides
BWI76_RS26695: BWI76_RS26695 - iron-containing alcohol dehydrogenase, at 5,527,563 to 5,528,711
_RS26695
BWI76_RS26700: BWI76_RS26700 - alpha,alpha-trehalase, at 5,528,978 to 5,530,630
_RS26700
BWI76_RS26705: BWI76_RS26705 - putative acetyltransferase, at 5,530,699 to 5,531,226
_RS26705
BWI76_RS26710: BWI76_RS26710 - lysozyme, at 5,531,302 to 5,531,730
_RS26710
Position (kb) 5528
5529
5530
5531 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5527.987 kb on - strand, within BWI76_RS26695 at 5528.192 kb on - strand, within BWI76_RS26695 at 5528.238 kb on - strand, within BWI76_RS26695 at 5528.289 kb on + strand, within BWI76_RS26695 at 5528.311 kb on - strand, within BWI76_RS26695 at 5528.316 kb on + strand, within BWI76_RS26695 at 5528.316 kb on + strand, within BWI76_RS26695 at 5528.375 kb on + strand, within BWI76_RS26695 at 5528.534 kb on - strand, within BWI76_RS26695 at 5528.562 kb on + strand, within BWI76_RS26695 at 5528.925 kb on + strand at 5528.965 kb on + strand at 5529.024 kb on - strand at 5529.079 kb on - strand at 5529.131 kb on + strand at 5529.139 kb on - strand at 5529.153 kb on + strand, within BWI76_RS26700 at 5529.153 kb on + strand, within BWI76_RS26700 at 5529.388 kb on + strand, within BWI76_RS26700 at 5529.389 kb on - strand, within BWI76_RS26700 at 5529.396 kb on - strand, within BWI76_RS26700 at 5529.398 kb on + strand, within BWI76_RS26700 at 5529.465 kb on - strand, within BWI76_RS26700 at 5529.712 kb on - strand, within BWI76_RS26700 at 5529.719 kb on - strand, within BWI76_RS26700 at 5530.320 kb on + strand, within BWI76_RS26700 at 5530.320 kb on + strand, within BWI76_RS26700 at 5530.320 kb on + strand, within BWI76_RS26700 at 5530.320 kb on + strand, within BWI76_RS26700 at 5530.328 kb on - strand, within BWI76_RS26700 at 5530.379 kb on + strand, within BWI76_RS26700 at 5530.419 kb on + strand, within BWI76_RS26700 at 5530.445 kb on + strand, within BWI76_RS26700 at 5530.445 kb on + strand, within BWI76_RS26700 at 5530.453 kb on - strand, within BWI76_RS26700 at 5530.453 kb on - strand, within BWI76_RS26700 at 5530.455 kb on + strand, within BWI76_RS26700 at 5530.715 kb on + strand at 5530.715 kb on + strand at 5530.720 kb on + strand at 5530.723 kb on - strand at 5530.723 kb on - strand at 5530.789 kb on - strand, within BWI76_RS26705 at 5530.930 kb on - strand, within BWI76_RS26705 at 5530.951 kb on + strand, within BWI76_RS26705 at 5530.998 kb on + strand, within BWI76_RS26705 at 5531.005 kb on + strand, within BWI76_RS26705 at 5531.006 kb on - strand, within BWI76_RS26705 at 5531.006 kb on - strand, within BWI76_RS26705 at 5531.006 kb on - strand, within BWI76_RS26705 at 5531.015 kb on + strand, within BWI76_RS26705 at 5531.020 kb on - strand, within BWI76_RS26705 at 5531.165 kb on + strand, within BWI76_RS26705 at 5531.225 kb on + strand at 5531.233 kb on - strand at 5531.264 kb on + strand at 5531.275 kb on - strand at 5531.327 kb on + strand at 5531.344 kb on - strand at 5531.362 kb on + strand, within BWI76_RS26710 at 5531.370 kb on - strand, within BWI76_RS26710 at 5531.417 kb on + strand, within BWI76_RS26710 at 5531.418 kb on - strand, within BWI76_RS26710 at 5531.425 kb on - strand, within BWI76_RS26710 at 5531.430 kb on - strand, within BWI76_RS26710 at 5531.441 kb on + strand, within BWI76_RS26710 at 5531.470 kb on - strand, within BWI76_RS26710 at 5531.480 kb on - strand, within BWI76_RS26710 at 5531.510 kb on + strand, within BWI76_RS26710 at 5531.512 kb on + strand, within BWI76_RS26710 at 5531.518 kb on - strand, within BWI76_RS26710 at 5531.522 kb on + strand, within BWI76_RS26710 at 5531.522 kb on + strand, within BWI76_RS26710 at 5531.530 kb on - strand, within BWI76_RS26710 at 5531.533 kb on + strand, within BWI76_RS26710 at 5531.537 kb on - strand, within BWI76_RS26710 at 5531.537 kb on - strand, within BWI76_RS26710 at 5531.547 kb on - strand, within BWI76_RS26710 at 5531.552 kb on + strand, within BWI76_RS26710 at 5531.553 kb on - strand, within BWI76_RS26710 at 5531.557 kb on + strand, within BWI76_RS26710 at 5531.560 kb on - strand, within BWI76_RS26710 at 5531.560 kb on - strand, within BWI76_RS26710 at 5531.562 kb on + strand, within BWI76_RS26710 at 5531.566 kb on + strand, within BWI76_RS26710 at 5531.567 kb on + strand, within BWI76_RS26710 at 5531.567 kb on + strand, within BWI76_RS26710 at 5531.567 kb on + strand, within BWI76_RS26710 at 5531.567 kb on + strand, within BWI76_RS26710 at 5531.572 kb on + strand, within BWI76_RS26710 at 5531.573 kb on - strand, within BWI76_RS26710 at 5531.573 kb on - strand, within BWI76_RS26710 at 5531.574 kb on - strand, within BWI76_RS26710 at 5531.574 kb on - strand, within BWI76_RS26710 at 5531.574 kb on - strand, within BWI76_RS26710 at 5531.575 kb on - strand, within BWI76_RS26710 at 5531.575 kb on - strand, within BWI76_RS26710 at 5531.575 kb on - strand, within BWI76_RS26710 at 5531.575 kb on - strand, within BWI76_RS26710 at 5531.575 kb on - strand, within BWI76_RS26710 at 5531.575 kb on - strand, within BWI76_RS26710 at 5531.575 kb on - strand, within BWI76_RS26710 at 5531.611 kb on + strand, within BWI76_RS26710 at 5531.619 kb on - strand, within BWI76_RS26710 at 5531.621 kb on + strand, within BWI76_RS26710 at 5531.621 kb on + strand, within BWI76_RS26710 at 5531.622 kb on + strand, within BWI76_RS26710 at 5531.628 kb on - strand, within BWI76_RS26710 at 5531.629 kb on - strand, within BWI76_RS26710 at 5531.629 kb on - strand at 5531.629 kb on - strand, within BWI76_RS26710 at 5531.629 kb on - strand, within BWI76_RS26710 at 5531.629 kb on - strand, within BWI76_RS26710 at 5531.630 kb on - strand, within BWI76_RS26710 at 5531.630 kb on - strand, within BWI76_RS26710
Per-strain Table
Position Strand Gene LocusTag Fraction D-Raffinose (C) remove 5,527,987 - BWI76_RS26695 0.37 +1.0 5,528,192 - BWI76_RS26695 0.55 -1.7 5,528,238 - BWI76_RS26695 0.59 -0.3 5,528,289 + BWI76_RS26695 0.63 -0.4 5,528,311 - BWI76_RS26695 0.65 +0.3 5,528,316 + BWI76_RS26695 0.66 +0.1 5,528,316 + BWI76_RS26695 0.66 +0.4 5,528,375 + BWI76_RS26695 0.71 +0.3 5,528,534 - BWI76_RS26695 0.85 +0.9 5,528,562 + BWI76_RS26695 0.87 +0.3 5,528,925 + -1.6 5,528,965 + -0.0 5,529,024 - -0.3 5,529,079 - -0.2 5,529,131 + -0.4 5,529,139 - +0.0 5,529,153 + BWI76_RS26700 0.11 +0.8 5,529,153 + BWI76_RS26700 0.11 +1.3 5,529,388 + BWI76_RS26700 0.25 +0.3 5,529,389 - BWI76_RS26700 0.25 +0.3 5,529,396 - BWI76_RS26700 0.25 +0.2 5,529,398 + BWI76_RS26700 0.25 +0.9 5,529,465 - BWI76_RS26700 0.29 -0.6 5,529,712 - BWI76_RS26700 0.44 -0.5 5,529,719 - BWI76_RS26700 0.45 +0.4 5,530,320 + BWI76_RS26700 0.81 -0.2 5,530,320 + BWI76_RS26700 0.81 -1.9 5,530,320 + BWI76_RS26700 0.81 +0.2 5,530,320 + BWI76_RS26700 0.81 +0.0 5,530,328 - BWI76_RS26700 0.82 +0.1 5,530,379 + BWI76_RS26700 0.85 -0.2 5,530,419 + BWI76_RS26700 0.87 +0.1 5,530,445 + BWI76_RS26700 0.89 +0.9 5,530,445 + BWI76_RS26700 0.89 -1.2 5,530,453 - BWI76_RS26700 0.89 -0.0 5,530,453 - BWI76_RS26700 0.89 +0.5 5,530,455 + BWI76_RS26700 0.89 +0.0 5,530,715 + -1.2 5,530,715 + +1.3 5,530,720 + +0.1 5,530,723 - +1.7 5,530,723 - +0.3 5,530,789 - BWI76_RS26705 0.17 -0.5 5,530,930 - BWI76_RS26705 0.44 +3.6 5,530,951 + BWI76_RS26705 0.48 +0.7 5,530,998 + BWI76_RS26705 0.57 +1.5 5,531,005 + BWI76_RS26705 0.58 +0.4 5,531,006 - BWI76_RS26705 0.58 -0.4 5,531,006 - BWI76_RS26705 0.58 -0.2 5,531,006 - BWI76_RS26705 0.58 +0.0 5,531,015 + BWI76_RS26705 0.60 +0.7 5,531,020 - BWI76_RS26705 0.61 +0.2 5,531,165 + BWI76_RS26705 0.88 -0.1 5,531,225 + +0.6 5,531,233 - +0.1 5,531,264 + -0.5 5,531,275 - -1.2 5,531,327 + -0.9 5,531,344 - -0.1 5,531,362 + BWI76_RS26710 0.14 -1.2 5,531,370 - BWI76_RS26710 0.16 +2.0 5,531,417 + BWI76_RS26710 0.27 +0.9 5,531,418 - BWI76_RS26710 0.27 -0.2 5,531,425 - BWI76_RS26710 0.29 -0.4 5,531,430 - BWI76_RS26710 0.30 +1.0 5,531,441 + BWI76_RS26710 0.32 +1.8 5,531,470 - BWI76_RS26710 0.39 +0.0 5,531,480 - BWI76_RS26710 0.41 +0.1 5,531,510 + BWI76_RS26710 0.48 +0.2 5,531,512 + BWI76_RS26710 0.49 -0.2 5,531,518 - BWI76_RS26710 0.50 -0.2 5,531,522 + BWI76_RS26710 0.51 +0.0 5,531,522 + BWI76_RS26710 0.51 -0.2 5,531,530 - BWI76_RS26710 0.53 +0.4 5,531,533 + BWI76_RS26710 0.54 +1.0 5,531,537 - BWI76_RS26710 0.55 -0.1 5,531,537 - BWI76_RS26710 0.55 -0.1 5,531,547 - BWI76_RS26710 0.57 -0.4 5,531,552 + BWI76_RS26710 0.58 +1.0 5,531,553 - BWI76_RS26710 0.59 +0.1 5,531,557 + BWI76_RS26710 0.59 +0.3 5,531,560 - BWI76_RS26710 0.60 +0.0 5,531,560 - BWI76_RS26710 0.60 -0.5 5,531,562 + BWI76_RS26710 0.61 -0.0 5,531,566 + BWI76_RS26710 0.62 -0.0 5,531,567 + BWI76_RS26710 0.62 +0.2 5,531,567 + BWI76_RS26710 0.62 -1.3 5,531,567 + BWI76_RS26710 0.62 -0.1 5,531,567 + BWI76_RS26710 0.62 -0.4 5,531,572 + BWI76_RS26710 0.63 -0.6 5,531,573 - BWI76_RS26710 0.63 +0.4 5,531,573 - BWI76_RS26710 0.63 -0.1 5,531,574 - BWI76_RS26710 0.63 +0.5 5,531,574 - BWI76_RS26710 0.63 -0.5 5,531,574 - BWI76_RS26710 0.63 -0.2 5,531,575 - BWI76_RS26710 0.64 +1.1 5,531,575 - BWI76_RS26710 0.64 +0.5 5,531,575 - BWI76_RS26710 0.64 -0.3 5,531,575 - BWI76_RS26710 0.64 -0.8 5,531,575 - BWI76_RS26710 0.64 +0.1 5,531,575 - BWI76_RS26710 0.64 +0.3 5,531,575 - BWI76_RS26710 0.64 +0.2 5,531,611 + BWI76_RS26710 0.72 -1.1 5,531,619 - BWI76_RS26710 0.74 +0.6 5,531,621 + BWI76_RS26710 0.74 -0.2 5,531,621 + BWI76_RS26710 0.74 +0.6 5,531,622 + BWI76_RS26710 0.75 +1.3 5,531,628 - BWI76_RS26710 0.76 +1.5 5,531,629 - BWI76_RS26710 0.76 +1.3 5,531,629 - +1.3 5,531,629 - BWI76_RS26710 0.76 -0.4 5,531,629 - BWI76_RS26710 0.76 -0.3 5,531,629 - BWI76_RS26710 0.76 +1.1 5,531,630 - BWI76_RS26710 0.76 +0.2 5,531,630 - BWI76_RS26710 0.76 +0.7
Or see this region's nucleotide sequence