Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23215

Experiment: D-Raffinose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23210 and BWI76_RS23215 are separated by 17 nucleotidesBWI76_RS23215 and BWI76_RS23220 are separated by 227 nucleotides BWI76_RS23210: BWI76_RS23210 - threonine-phosphate decarboxylase, at 4,834,503 to 4,835,582 _RS23210 BWI76_RS23215: BWI76_RS23215 - N-acetylmuramoyl-L-alanine amidase, at 4,835,600 to 4,836,853 _RS23215 BWI76_RS23220: BWI76_RS23220 - amino-acid N-acetyltransferase, at 4,837,081 to 4,838,412 _RS23220 Position (kb) 4835 4836 4837Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4834.697 kb on + strand, within BWI76_RS23210at 4834.701 kb on + strand, within BWI76_RS23210at 4835.216 kb on + strand, within BWI76_RS23210at 4835.408 kb on + strand, within BWI76_RS23210at 4835.566 kb on + strandat 4835.602 kb on + strandat 4835.665 kb on - strandat 4835.717 kb on - strandat 4835.733 kb on + strand, within BWI76_RS23215at 4835.954 kb on + strand, within BWI76_RS23215at 4835.969 kb on - strand, within BWI76_RS23215at 4836.066 kb on + strand, within BWI76_RS23215at 4836.246 kb on + strand, within BWI76_RS23215at 4836.329 kb on + strand, within BWI76_RS23215at 4836.364 kb on - strand, within BWI76_RS23215at 4836.448 kb on + strand, within BWI76_RS23215at 4836.448 kb on + strand, within BWI76_RS23215at 4836.499 kb on + strand, within BWI76_RS23215at 4836.903 kb on + strandat 4836.923 kb on + strandat 4837.004 kb on + strandat 4837.458 kb on - strand, within BWI76_RS23220at 4837.462 kb on - strand, within BWI76_RS23220at 4837.491 kb on + strand, within BWI76_RS23220at 4837.491 kb on + strand, within BWI76_RS23220at 4837.499 kb on - strand, within BWI76_RS23220at 4837.499 kb on - strand, within BWI76_RS23220at 4837.631 kb on + strand, within BWI76_RS23220at 4837.644 kb on - strand, within BWI76_RS23220

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Raffinose (C)
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4,834,697 + BWI76_RS23210 0.18 +0.7
4,834,701 + BWI76_RS23210 0.18 -0.2
4,835,216 + BWI76_RS23210 0.66 -0.7
4,835,408 + BWI76_RS23210 0.84 +1.3
4,835,566 + +0.0
4,835,602 + +1.4
4,835,665 - +0.5
4,835,717 - -0.4
4,835,733 + BWI76_RS23215 0.11 -0.1
4,835,954 + BWI76_RS23215 0.28 +1.8
4,835,969 - BWI76_RS23215 0.29 -0.2
4,836,066 + BWI76_RS23215 0.37 +3.0
4,836,246 + BWI76_RS23215 0.52 +1.4
4,836,329 + BWI76_RS23215 0.58 +0.0
4,836,364 - BWI76_RS23215 0.61 +1.8
4,836,448 + BWI76_RS23215 0.68 +0.6
4,836,448 + BWI76_RS23215 0.68 -0.2
4,836,499 + BWI76_RS23215 0.72 -0.7
4,836,903 + +0.2
4,836,923 + -0.3
4,837,004 + -0.7
4,837,458 - BWI76_RS23220 0.28 -1.2
4,837,462 - BWI76_RS23220 0.29 -4.2
4,837,491 + BWI76_RS23220 0.31 -4.3
4,837,491 + BWI76_RS23220 0.31 -1.9
4,837,499 - BWI76_RS23220 0.31 -3.8
4,837,499 - BWI76_RS23220 0.31 -3.9
4,837,631 + BWI76_RS23220 0.41 -1.9
4,837,644 - BWI76_RS23220 0.42 -3.2

Or see this region's nucleotide sequence