Experiment: D-Raffinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19725 and BWI76_RS19730 are separated by 16 nucleotides BWI76_RS19730 and BWI76_RS19735 are separated by 0 nucleotides BWI76_RS19735 and BWI76_RS19740 are separated by 331 nucleotides
BWI76_RS19725: BWI76_RS19725 - PTS fructose transporter subunit EIIBC, at 4,122,963 to 4,124,639
_RS19725
BWI76_RS19730: BWI76_RS19730 - 1-phosphofructokinase, at 4,124,656 to 4,125,594
_RS19730
BWI76_RS19735: BWI76_RS19735 - bifunctional PTS fructose transporter subunit IIA/HPr protein, at 4,125,595 to 4,126,725
_RS19735
BWI76_RS19740: BWI76_RS19740 - sugar efflux transporter SetB, at 4,127,057 to 4,128,238
_RS19740
Position (kb) 4125
4126
4127 Strain fitness (log2 ratio) -1
0
1
2 at 4124.598 kb on + strand at 4124.856 kb on + strand, within BWI76_RS19730 at 4125.000 kb on + strand, within BWI76_RS19730 at 4125.011 kb on + strand, within BWI76_RS19730 at 4125.207 kb on - strand, within BWI76_RS19730 at 4125.659 kb on + strand at 4125.667 kb on - strand at 4125.861 kb on - strand, within BWI76_RS19735 at 4126.059 kb on - strand, within BWI76_RS19735 at 4126.211 kb on + strand, within BWI76_RS19735 at 4126.331 kb on - strand, within BWI76_RS19735 at 4126.343 kb on + strand, within BWI76_RS19735 at 4126.351 kb on - strand, within BWI76_RS19735 at 4126.392 kb on - strand, within BWI76_RS19735 at 4126.530 kb on + strand, within BWI76_RS19735 at 4126.649 kb on - strand at 4126.654 kb on - strand at 4126.870 kb on + strand at 4126.996 kb on - strand at 4127.174 kb on - strand at 4127.545 kb on - strand, within BWI76_RS19740
Per-strain Table
Position Strand Gene LocusTag Fraction D-Raffinose (C) remove 4,124,598 + +1.5 4,124,856 + BWI76_RS19730 0.21 +1.7 4,125,000 + BWI76_RS19730 0.37 +1.2 4,125,011 + BWI76_RS19730 0.38 +1.8 4,125,207 - BWI76_RS19730 0.59 +0.3 4,125,659 + +2.1 4,125,667 - +2.0 4,125,861 - BWI76_RS19735 0.24 +1.9 4,126,059 - BWI76_RS19735 0.41 +0.2 4,126,211 + BWI76_RS19735 0.54 +1.7 4,126,331 - BWI76_RS19735 0.65 +1.2 4,126,343 + BWI76_RS19735 0.66 +1.2 4,126,351 - BWI76_RS19735 0.67 +1.0 4,126,392 - BWI76_RS19735 0.70 -0.0 4,126,530 + BWI76_RS19735 0.83 +1.0 4,126,649 - -0.8 4,126,654 - +1.0 4,126,870 + +0.5 4,126,996 - +0.0 4,127,174 - +0.3 4,127,545 - BWI76_RS19740 0.41 +1.2
Or see this region's nucleotide sequence