Experiment: D-Raffinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19100 and BWI76_RS19105 are separated by 459 nucleotides BWI76_RS19105 and BWI76_RS19110 are separated by 961 nucleotides
BWI76_RS19100: BWI76_RS19100 - putative acid phosphatase, at 3,968,891 to 3,969,520
_RS19100
BWI76_RS19105: BWI76_RS19105 - GalU regulator GalF, at 3,969,980 to 3,970,876
_RS19105
BWI76_RS19110: BWI76_RS19110 - hypothetical protein, at 3,971,838 to 3,973,424
_RS19110
Position (kb)
3969
3970
3971 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 3969.091 kb on + strand, within BWI76_RS19100 at 3969.347 kb on - strand, within BWI76_RS19100 at 3969.400 kb on - strand, within BWI76_RS19100 at 3969.410 kb on - strand, within BWI76_RS19100 at 3969.415 kb on - strand, within BWI76_RS19100 at 3969.470 kb on + strand at 3969.470 kb on + strand at 3969.478 kb on - strand at 3969.478 kb on - strand at 3969.478 kb on - strand at 3969.483 kb on - strand at 3969.582 kb on + strand at 3969.590 kb on - strand at 3969.618 kb on + strand at 3969.675 kb on + strand at 3969.887 kb on + strand at 3969.895 kb on - strand at 3969.897 kb on - strand at 3970.085 kb on + strand, within BWI76_RS19105 at 3970.092 kb on - strand, within BWI76_RS19105 at 3970.183 kb on + strand, within BWI76_RS19105 at 3970.183 kb on + strand, within BWI76_RS19105 at 3970.339 kb on + strand, within BWI76_RS19105 at 3970.384 kb on + strand, within BWI76_RS19105 at 3970.392 kb on - strand, within BWI76_RS19105 at 3970.432 kb on + strand, within BWI76_RS19105 at 3970.598 kb on + strand, within BWI76_RS19105 at 3970.749 kb on + strand, within BWI76_RS19105 at 3970.757 kb on - strand, within BWI76_RS19105 at 3970.762 kb on + strand, within BWI76_RS19105 at 3970.762 kb on + strand, within BWI76_RS19105 at 3970.828 kb on + strand at 3970.828 kb on + strand at 3970.837 kb on - strand at 3970.837 kb on - strand at 3970.837 kb on - strand at 3970.837 kb on - strand at 3970.837 kb on - strand at 3970.837 kb on - strand at 3970.882 kb on + strand at 3970.890 kb on + strand at 3970.890 kb on + strand at 3970.890 kb on - strand at 3970.890 kb on - strand at 3970.898 kb on - strand at 3970.906 kb on - strand at 3970.918 kb on + strand at 3970.922 kb on - strand at 3970.952 kb on + strand at 3970.952 kb on + strand at 3970.954 kb on + strand at 3970.954 kb on + strand at 3970.960 kb on - strand at 3970.960 kb on - strand at 3970.962 kb on + strand at 3970.962 kb on + strand at 3970.962 kb on - strand at 3970.964 kb on + strand at 3970.964 kb on + strand at 3970.967 kb on - strand at 3970.970 kb on - strand at 3970.970 kb on - strand at 3970.970 kb on - strand at 3971.014 kb on + strand at 3971.037 kb on - strand at 3971.145 kb on - strand at 3971.197 kb on + strand at 3971.197 kb on + strand at 3971.197 kb on + strand at 3971.203 kb on + strand at 3971.206 kb on - strand at 3971.208 kb on + strand at 3971.216 kb on - strand at 3971.216 kb on - strand at 3971.216 kb on - strand at 3971.216 kb on - strand at 3971.216 kb on - strand at 3971.216 kb on - strand at 3971.242 kb on - strand at 3971.288 kb on + strand at 3971.313 kb on + strand at 3971.346 kb on - strand at 3971.348 kb on + strand at 3971.349 kb on - strand at 3971.349 kb on - strand at 3971.356 kb on - strand at 3971.361 kb on - strand at 3971.403 kb on + strand at 3971.416 kb on - strand at 3971.467 kb on + strand at 3971.468 kb on - strand at 3971.475 kb on - strand at 3971.475 kb on - strand at 3971.533 kb on + strand at 3971.533 kb on + strand at 3971.533 kb on + strand at 3971.541 kb on - strand at 3971.560 kb on + strand at 3971.560 kb on + strand at 3971.560 kb on + strand at 3971.560 kb on + strand at 3971.567 kb on - strand at 3971.568 kb on - strand at 3971.568 kb on - strand at 3971.568 kb on - strand at 3971.568 kb on - strand at 3971.578 kb on - strand at 3971.588 kb on - strand at 3971.611 kb on + strand at 3971.675 kb on - strand at 3971.684 kb on + strand at 3971.684 kb on + strand at 3971.692 kb on - strand at 3971.692 kb on - strand at 3971.692 kb on - strand at 3971.692 kb on - strand at 3971.711 kb on + strand at 3971.788 kb on + strand at 3971.799 kb on + strand at 3971.807 kb on - strand at 3971.807 kb on - strand at 3971.807 kb on - strand at 3971.807 kb on - strand at 3971.809 kb on + strand at 3971.809 kb on + strand at 3971.809 kb on + strand at 3971.809 kb on + strand at 3971.809 kb on - strand at 3971.816 kb on - strand at 3971.817 kb on - strand at 3971.817 kb on - strand at 3971.817 kb on - strand at 3971.817 kb on - strand at 3971.824 kb on + strand at 3971.824 kb on + strand at 3971.832 kb on - strand at 3971.856 kb on + strand at 3971.864 kb on - strand at 3971.869 kb on - strand at 3971.874 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Raffinose (C) remove 3,969,091 + BWI76_RS19100 0.32 -1.3 3,969,347 - BWI76_RS19100 0.72 +0.1 3,969,400 - BWI76_RS19100 0.81 -0.5 3,969,410 - BWI76_RS19100 0.82 -0.9 3,969,415 - BWI76_RS19100 0.83 +0.4 3,969,470 + -1.1 3,969,470 + -1.1 3,969,478 - -1.2 3,969,478 - -1.1 3,969,478 - -0.8 3,969,483 - -1.2 3,969,582 + -1.1 3,969,590 - -0.4 3,969,618 + +0.1 3,969,675 + +0.2 3,969,887 + -0.4 3,969,895 - +0.3 3,969,897 - -0.3 3,970,085 + BWI76_RS19105 0.12 +1.4 3,970,092 - BWI76_RS19105 0.12 +3.1 3,970,183 + BWI76_RS19105 0.23 +1.9 3,970,183 + BWI76_RS19105 0.23 +0.8 3,970,339 + BWI76_RS19105 0.40 +2.4 3,970,384 + BWI76_RS19105 0.45 +2.6 3,970,392 - BWI76_RS19105 0.46 +2.6 3,970,432 + BWI76_RS19105 0.50 +2.1 3,970,598 + BWI76_RS19105 0.69 +2.4 3,970,749 + BWI76_RS19105 0.86 +3.9 3,970,757 - BWI76_RS19105 0.87 +2.9 3,970,762 + BWI76_RS19105 0.87 +2.5 3,970,762 + BWI76_RS19105 0.87 +3.1 3,970,828 + +4.3 3,970,828 + -0.2 3,970,837 - +2.6 3,970,837 - +1.7 3,970,837 - +3.1 3,970,837 - +2.6 3,970,837 - +2.6 3,970,837 - +2.6 3,970,882 + +3.3 3,970,890 + +4.1 3,970,890 + +3.4 3,970,890 - +3.0 3,970,890 - +2.5 3,970,898 - +2.5 3,970,906 - +1.6 3,970,918 + +3.2 3,970,922 - +0.9 3,970,952 + +1.8 3,970,952 + +2.5 3,970,954 + +1.5 3,970,954 + +3.0 3,970,960 - -0.8 3,970,960 - +2.4 3,970,962 + +2.2 3,970,962 + +2.8 3,970,962 - +0.8 3,970,964 + +1.4 3,970,964 + +2.9 3,970,967 - +1.1 3,970,970 - +0.9 3,970,970 - -0.4 3,970,970 - +2.4 3,971,014 + +0.3 3,971,037 - +0.0 3,971,145 - +0.0 3,971,197 + +0.8 3,971,197 + -1.3 3,971,197 + -0.7 3,971,203 + -0.9 3,971,206 - -0.6 3,971,208 + -1.2 3,971,216 - -0.3 3,971,216 - +0.3 3,971,216 - -1.0 3,971,216 - +0.4 3,971,216 - -0.1 3,971,216 - -1.1 3,971,242 - +0.4 3,971,288 + -0.2 3,971,313 + -0.0 3,971,346 - -0.3 3,971,348 + -0.1 3,971,349 - -0.6 3,971,349 - -0.1 3,971,356 - +0.4 3,971,361 - -0.1 3,971,403 + +1.7 3,971,416 - -0.1 3,971,467 + +0.3 3,971,468 - +0.9 3,971,475 - +1.4 3,971,475 - +0.2 3,971,533 + +0.7 3,971,533 + +0.3 3,971,533 + -0.1 3,971,541 - -0.7 3,971,560 + -0.7 3,971,560 + -0.1 3,971,560 + +0.3 3,971,560 + +0.1 3,971,567 - +0.0 3,971,568 - -0.3 3,971,568 - -0.7 3,971,568 - -0.2 3,971,568 - +0.3 3,971,578 - -0.6 3,971,588 - +0.4 3,971,611 + +0.3 3,971,675 - +0.7 3,971,684 + +1.3 3,971,684 + -0.0 3,971,692 - +0.6 3,971,692 - +1.8 3,971,692 - +0.7 3,971,692 - -0.4 3,971,711 + -0.1 3,971,788 + +0.3 3,971,799 + +0.7 3,971,807 - -1.3 3,971,807 - -0.0 3,971,807 - +0.1 3,971,807 - -0.2 3,971,809 + +0.2 3,971,809 + -0.1 3,971,809 + +2.9 3,971,809 + +0.8 3,971,809 - +0.5 3,971,816 - +0.2 3,971,817 - +0.5 3,971,817 - -0.9 3,971,817 - +0.7 3,971,817 - +0.5 3,971,824 + -0.3 3,971,824 + -0.2 3,971,832 - -1.7 3,971,856 + +0.5 3,971,864 - -0.1 3,971,869 - -0.3 3,971,874 - +0.1
Or see this region's nucleotide sequence