Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17795

Experiment: D-Raffinose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS17785 and BWI76_RS17790 are separated by 3 nucleotidesBWI76_RS17790 and BWI76_RS17795 are separated by 68 nucleotidesBWI76_RS17795 and BWI76_RS17800 are separated by 69 nucleotides BWI76_RS17785: BWI76_RS17785 - septum site-determining protein MinD, at 3,696,778 to 3,697,590 _RS17785 BWI76_RS17790: BWI76_RS17790 - cell division topological specificity factor, at 3,697,594 to 3,697,863 _RS17790 BWI76_RS17795: BWI76_RS17795 - ribonuclease D, at 3,697,932 to 3,699,059 _RS17795 BWI76_RS17800: BWI76_RS17800 - long-chain-fatty-acid--CoA ligase, at 3,699,129 to 3,700,847 _RS17800 Position (kb) 3697 3698 3699 3700Strain fitness (log2 ratio) -1 0 1 2at 3697.023 kb on + strand, within BWI76_RS17785at 3697.078 kb on + strand, within BWI76_RS17785at 3697.086 kb on - strand, within BWI76_RS17785at 3697.210 kb on - strand, within BWI76_RS17785at 3697.436 kb on + strand, within BWI76_RS17785at 3697.436 kb on + strand, within BWI76_RS17785at 3697.436 kb on + strand, within BWI76_RS17785at 3697.444 kb on - strand, within BWI76_RS17785at 3697.925 kb on + strandat 3698.089 kb on - strand, within BWI76_RS17795at 3698.670 kb on - strand, within BWI76_RS17795at 3698.717 kb on - strand, within BWI76_RS17795at 3698.939 kb on + strand, within BWI76_RS17795at 3699.781 kb on - strand, within BWI76_RS17800at 3699.888 kb on - strand, within BWI76_RS17800at 3699.940 kb on - strand, within BWI76_RS17800

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Raffinose (C)
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3,697,023 + BWI76_RS17785 0.30 +0.8
3,697,078 + BWI76_RS17785 0.37 -0.3
3,697,086 - BWI76_RS17785 0.38 -0.1
3,697,210 - BWI76_RS17785 0.53 -1.2
3,697,436 + BWI76_RS17785 0.81 -0.3
3,697,436 + BWI76_RS17785 0.81 -1.1
3,697,436 + BWI76_RS17785 0.81 -0.5
3,697,444 - BWI76_RS17785 0.82 +0.4
3,697,925 + -1.7
3,698,089 - BWI76_RS17795 0.14 -1.1
3,698,670 - BWI76_RS17795 0.65 +0.1
3,698,717 - BWI76_RS17795 0.70 +0.6
3,698,939 + BWI76_RS17795 0.89 -1.4
3,699,781 - BWI76_RS17800 0.38 +0.9
3,699,888 - BWI76_RS17800 0.44 +1.9
3,699,940 - BWI76_RS17800 0.47 -0.4

Or see this region's nucleotide sequence