Experiment: D-Raffinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00815 and BWI76_RS00820 are separated by 56 nucleotides BWI76_RS00820 and BWI76_RS00825 are separated by 205 nucleotides
BWI76_RS00815: BWI76_RS00815 - glycerol dehydrogenase, at 166,891 to 167,994
_RS00815
BWI76_RS00820: BWI76_RS00820 - fructose-6-phosphate aldolase, at 168,051 to 168,713
_RS00820
BWI76_RS00825: BWI76_RS00825 - AraC family transcriptional regulator, at 168,919 to 169,782
_RS00825
Position (kb) 168
169 Strain fitness (log2 ratio) -2
-1
0
1 at 167.100 kb on + strand, within BWI76_RS00815 at 167.207 kb on + strand, within BWI76_RS00815 at 167.221 kb on + strand, within BWI76_RS00815 at 167.285 kb on - strand, within BWI76_RS00815 at 167.510 kb on + strand, within BWI76_RS00815 at 167.640 kb on + strand, within BWI76_RS00815 at 167.735 kb on + strand, within BWI76_RS00815 at 167.743 kb on - strand, within BWI76_RS00815 at 167.896 kb on - strand at 168.079 kb on + strand at 168.079 kb on + strand at 168.096 kb on + strand at 168.189 kb on + strand, within BWI76_RS00820 at 168.297 kb on + strand, within BWI76_RS00820 at 168.305 kb on - strand, within BWI76_RS00820 at 168.384 kb on - strand, within BWI76_RS00820 at 168.395 kb on + strand, within BWI76_RS00820 at 168.481 kb on + strand, within BWI76_RS00820 at 168.590 kb on - strand, within BWI76_RS00820 at 168.742 kb on + strand at 168.848 kb on + strand at 168.978 kb on - strand at 169.099 kb on - strand, within BWI76_RS00825 at 169.128 kb on + strand, within BWI76_RS00825 at 169.137 kb on + strand, within BWI76_RS00825 at 169.285 kb on + strand, within BWI76_RS00825 at 169.293 kb on - strand, within BWI76_RS00825 at 169.346 kb on - strand, within BWI76_RS00825 at 169.495 kb on - strand, within BWI76_RS00825 at 169.509 kb on + strand, within BWI76_RS00825 at 169.529 kb on - strand, within BWI76_RS00825 at 169.610 kb on + strand, within BWI76_RS00825 at 169.625 kb on + strand, within BWI76_RS00825
Per-strain Table
Position Strand Gene LocusTag Fraction D-Raffinose (C) remove 167,100 + BWI76_RS00815 0.19 -0.0 167,207 + BWI76_RS00815 0.29 -0.1 167,221 + BWI76_RS00815 0.30 +0.2 167,285 - BWI76_RS00815 0.36 +0.3 167,510 + BWI76_RS00815 0.56 +0.7 167,640 + BWI76_RS00815 0.68 -0.6 167,735 + BWI76_RS00815 0.76 -1.4 167,743 - BWI76_RS00815 0.77 +0.6 167,896 - +0.2 168,079 + +0.7 168,079 + -0.5 168,096 + +0.2 168,189 + BWI76_RS00820 0.21 +0.1 168,297 + BWI76_RS00820 0.37 -0.0 168,305 - BWI76_RS00820 0.38 +0.1 168,384 - BWI76_RS00820 0.50 +0.2 168,395 + BWI76_RS00820 0.52 +0.3 168,481 + BWI76_RS00820 0.65 -2.0 168,590 - BWI76_RS00820 0.81 -0.9 168,742 + -1.0 168,848 + -0.5 168,978 - -0.8 169,099 - BWI76_RS00825 0.21 +0.6 169,128 + BWI76_RS00825 0.24 +0.0 169,137 + BWI76_RS00825 0.25 +0.4 169,285 + BWI76_RS00825 0.42 -0.4 169,293 - BWI76_RS00825 0.43 -1.3 169,346 - BWI76_RS00825 0.49 -1.5 169,495 - BWI76_RS00825 0.67 -0.5 169,509 + BWI76_RS00825 0.68 +0.0 169,529 - BWI76_RS00825 0.71 -0.2 169,610 + BWI76_RS00825 0.80 +1.4 169,625 + BWI76_RS00825 0.82 -0.7
Or see this region's nucleotide sequence