Experiment: D-Raffinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS00600 and BWI76_RS00605 are separated by 114 nucleotides BWI76_RS00605 and BWI76_RS00610 are separated by 41 nucleotides
BWI76_RS00600: BWI76_RS00600 - LacI family transcriptional regulator, at 119,728 to 120,723
_RS00600
BWI76_RS00605: BWI76_RS00605 - alpha-galactosidase, at 120,838 to 122,961
_RS00605
BWI76_RS00610: BWI76_RS00610 - MFS transporter, at 123,003 to 124,268
_RS00610
Position (kb) 120
121
122
123 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 119.850 kb on - strand, within BWI76_RS00600 at 119.890 kb on - strand, within BWI76_RS00600 at 120.058 kb on - strand, within BWI76_RS00600 at 120.072 kb on - strand, within BWI76_RS00600 at 120.072 kb on - strand, within BWI76_RS00600 at 120.118 kb on - strand, within BWI76_RS00600 at 120.418 kb on - strand, within BWI76_RS00600 at 120.613 kb on + strand, within BWI76_RS00600 at 121.130 kb on + strand, within BWI76_RS00605 at 121.201 kb on + strand, within BWI76_RS00605 at 121.222 kb on + strand, within BWI76_RS00605 at 121.230 kb on - strand, within BWI76_RS00605 at 121.284 kb on + strand, within BWI76_RS00605 at 121.458 kb on + strand, within BWI76_RS00605 at 121.644 kb on - strand, within BWI76_RS00605 at 121.654 kb on - strand, within BWI76_RS00605 at 121.720 kb on + strand, within BWI76_RS00605 at 121.765 kb on - strand, within BWI76_RS00605 at 121.832 kb on + strand, within BWI76_RS00605 at 121.913 kb on + strand, within BWI76_RS00605 at 121.990 kb on + strand, within BWI76_RS00605 at 121.998 kb on - strand, within BWI76_RS00605 at 121.998 kb on - strand, within BWI76_RS00605 at 122.033 kb on + strand, within BWI76_RS00605 at 122.147 kb on + strand, within BWI76_RS00605 at 122.179 kb on - strand at 122.193 kb on + strand, within BWI76_RS00605 at 122.288 kb on - strand, within BWI76_RS00605 at 122.317 kb on + strand, within BWI76_RS00605 at 122.337 kb on + strand, within BWI76_RS00605 at 122.378 kb on + strand, within BWI76_RS00605 at 122.477 kb on - strand, within BWI76_RS00605 at 122.861 kb on - strand at 122.986 kb on + strand at 123.057 kb on - strand at 123.127 kb on + strand at 123.135 kb on - strand, within BWI76_RS00610 at 123.162 kb on - strand, within BWI76_RS00610 at 123.204 kb on - strand, within BWI76_RS00610 at 123.231 kb on - strand, within BWI76_RS00610 at 123.500 kb on + strand, within BWI76_RS00610 at 123.500 kb on + strand, within BWI76_RS00610 at 123.505 kb on + strand, within BWI76_RS00610 at 123.508 kb on - strand, within BWI76_RS00610 at 123.590 kb on - strand, within BWI76_RS00610 at 123.598 kb on + strand, within BWI76_RS00610 at 123.598 kb on - strand, within BWI76_RS00610 at 123.625 kb on - strand, within BWI76_RS00610 at 123.796 kb on + strand, within BWI76_RS00610 at 123.855 kb on + strand, within BWI76_RS00610
Per-strain Table
Position Strand Gene LocusTag Fraction D-Raffinose (C) remove 119,850 - BWI76_RS00600 0.12 -0.6 119,890 - BWI76_RS00600 0.16 -2.6 120,058 - BWI76_RS00600 0.33 -1.7 120,072 - BWI76_RS00600 0.35 -0.2 120,072 - BWI76_RS00600 0.35 -2.0 120,118 - BWI76_RS00600 0.39 -2.9 120,418 - BWI76_RS00600 0.69 -2.6 120,613 + BWI76_RS00600 0.89 -1.6 121,130 + BWI76_RS00605 0.14 -1.5 121,201 + BWI76_RS00605 0.17 -0.9 121,222 + BWI76_RS00605 0.18 -1.4 121,230 - BWI76_RS00605 0.18 -0.2 121,284 + BWI76_RS00605 0.21 -1.4 121,458 + BWI76_RS00605 0.29 -0.8 121,644 - BWI76_RS00605 0.38 -1.5 121,654 - BWI76_RS00605 0.38 -0.7 121,720 + BWI76_RS00605 0.42 -1.5 121,765 - BWI76_RS00605 0.44 +0.8 121,832 + BWI76_RS00605 0.47 +0.0 121,913 + BWI76_RS00605 0.51 -1.2 121,990 + BWI76_RS00605 0.54 +0.4 121,998 - BWI76_RS00605 0.55 -0.5 121,998 - BWI76_RS00605 0.55 -0.9 122,033 + BWI76_RS00605 0.56 -1.0 122,147 + BWI76_RS00605 0.62 -0.9 122,179 - +1.4 122,193 + BWI76_RS00605 0.64 -1.3 122,288 - BWI76_RS00605 0.68 -1.7 122,317 + BWI76_RS00605 0.70 -1.0 122,337 + BWI76_RS00605 0.71 +0.6 122,378 + BWI76_RS00605 0.73 -0.9 122,477 - BWI76_RS00605 0.77 +0.9 122,861 - -0.2 122,986 + -1.9 123,057 - -0.6 123,127 + +2.2 123,135 - BWI76_RS00610 0.10 -2.5 123,162 - BWI76_RS00610 0.13 +1.1 123,204 - BWI76_RS00610 0.16 -0.8 123,231 - BWI76_RS00610 0.18 -1.5 123,500 + BWI76_RS00610 0.39 -0.6 123,500 + BWI76_RS00610 0.39 -0.1 123,505 + BWI76_RS00610 0.40 -0.2 123,508 - BWI76_RS00610 0.40 -0.9 123,590 - BWI76_RS00610 0.46 -0.3 123,598 + BWI76_RS00610 0.47 -0.8 123,598 - BWI76_RS00610 0.47 +1.9 123,625 - BWI76_RS00610 0.49 -0.9 123,796 + BWI76_RS00610 0.63 -0.5 123,855 + BWI76_RS00610 0.67 -0.7
Or see this region's nucleotide sequence