Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22015 and AO353_22020 are separated by 28 nucleotides AO353_22020 and AO353_22025 are separated by 75 nucleotides AO353_22025 and AO353_22030 are separated by 154 nucleotides
AO353_22015: AO353_22015 - short-chain dehydrogenase, at 4,821,818 to 4,823,008
_22015
AO353_22020: AO353_22020 - hypothetical protein, at 4,823,037 to 4,823,474
_22020
AO353_22025: AO353_22025 - iron-sulfur cluster repair di-iron protein, at 4,823,550 to 4,824,224
_22025
AO353_22030: AO353_22030 - transcriptional regulator, at 4,824,379 to 4,825,908
_22030
Position (kb)
4823
4824 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.250 kb on + strand, within AO353_22015 at 4822.304 kb on + strand, within AO353_22015 at 4822.508 kb on + strand, within AO353_22015 at 4822.508 kb on + strand, within AO353_22015 at 4822.508 kb on + strand, within AO353_22015 at 4822.508 kb on + strand, within AO353_22015 at 4822.509 kb on - strand, within AO353_22015 at 4822.509 kb on - strand, within AO353_22015 at 4822.509 kb on - strand, within AO353_22015 at 4822.652 kb on + strand, within AO353_22015 at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.040 kb on + strand at 4823.041 kb on - strand at 4823.041 kb on - strand at 4823.047 kb on - strand at 4823.047 kb on - strand at 4823.047 kb on - strand at 4823.190 kb on - strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.218 kb on + strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.219 kb on - strand, within AO353_22020 at 4823.220 kb on + strand, within AO353_22020 at 4823.221 kb on - strand, within AO353_22020 at 4823.221 kb on - strand, within AO353_22020 at 4823.221 kb on - strand, within AO353_22020 at 4823.291 kb on + strand, within AO353_22020 at 4823.291 kb on + strand, within AO353_22020 at 4823.291 kb on + strand, within AO353_22020 at 4823.340 kb on + strand, within AO353_22020 at 4823.340 kb on + strand, within AO353_22020 at 4823.340 kb on + strand, within AO353_22020 at 4823.340 kb on + strand, within AO353_22020 at 4823.341 kb on - strand, within AO353_22020 at 4823.341 kb on - strand, within AO353_22020 at 4823.341 kb on - strand, within AO353_22020 at 4823.341 kb on - strand, within AO353_22020 at 4823.341 kb on - strand, within AO353_22020 at 4823.460 kb on + strand at 4823.460 kb on + strand at 4823.461 kb on - strand at 4823.492 kb on + strand at 4823.493 kb on - strand at 4823.685 kb on + strand, within AO353_22025 at 4823.685 kb on + strand, within AO353_22025 at 4823.685 kb on + strand at 4823.686 kb on - strand, within AO353_22025 at 4824.150 kb on - strand, within AO353_22025 at 4824.150 kb on - strand, within AO353_22025 at 4824.150 kb on - strand, within AO353_22025 at 4824.235 kb on + strand at 4824.236 kb on - strand at 4824.236 kb on - strand at 4824.236 kb on - strand at 4824.282 kb on + strand at 4824.315 kb on + strand at 4824.327 kb on + strand at 4824.327 kb on + strand at 4824.328 kb on - strand at 4824.361 kb on + strand at 4824.361 kb on + strand at 4824.361 kb on + strand at 4824.361 kb on + strand at 4824.362 kb on - strand at 4824.362 kb on - strand at 4824.362 kb on - strand at 4824.362 kb on - strand at 4824.368 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.372 kb on + strand at 4824.373 kb on - strand at 4824.373 kb on - strand at 4824.375 kb on + strand at 4824.375 kb on + strand at 4824.375 kb on + strand at 4824.376 kb on - strand at 4824.466 kb on + strand at 4824.466 kb on + strand at 4824.467 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 4,822,246 + AO353_22015 0.36 +2.3 4,822,246 + AO353_22015 0.36 -0.9 4,822,246 + AO353_22015 0.36 -2.5 4,822,246 + AO353_22015 0.36 -1.6 4,822,246 + AO353_22015 0.36 -0.6 4,822,246 + AO353_22015 0.36 -0.9 4,822,246 + AO353_22015 0.36 +0.1 4,822,246 + AO353_22015 0.36 +0.7 4,822,246 + AO353_22015 0.36 -0.9 4,822,247 - AO353_22015 0.36 +1.0 4,822,247 - AO353_22015 0.36 -1.3 4,822,247 - AO353_22015 0.36 +0.2 4,822,247 - AO353_22015 0.36 -2.3 4,822,247 - AO353_22015 0.36 -0.3 4,822,247 - AO353_22015 0.36 +1.4 4,822,250 + AO353_22015 0.36 +0.3 4,822,304 + AO353_22015 0.41 +0.1 4,822,508 + AO353_22015 0.58 +1.2 4,822,508 + AO353_22015 0.58 -0.4 4,822,508 + AO353_22015 0.58 +0.3 4,822,508 + AO353_22015 0.58 -2.6 4,822,509 - AO353_22015 0.58 -1.6 4,822,509 - AO353_22015 0.58 +1.3 4,822,509 - AO353_22015 0.58 +0.7 4,822,652 + AO353_22015 0.70 +0.2 4,823,040 + +0.1 4,823,040 + -0.4 4,823,040 + -2.3 4,823,040 + -0.3 4,823,040 + -0.3 4,823,040 + -0.3 4,823,040 + -0.9 4,823,040 + +0.3 4,823,040 + +0.3 4,823,040 + -2.1 4,823,040 + +0.7 4,823,041 - -0.7 4,823,041 - +0.7 4,823,047 - -1.2 4,823,047 - -1.6 4,823,047 - +0.2 4,823,190 - AO353_22020 0.35 +1.9 4,823,218 + AO353_22020 0.41 +1.1 4,823,218 + AO353_22020 0.41 +1.3 4,823,218 + AO353_22020 0.41 -2.3 4,823,218 + AO353_22020 0.41 -0.3 4,823,218 + AO353_22020 0.41 +0.7 4,823,218 + AO353_22020 0.41 +1.3 4,823,218 + AO353_22020 0.41 +1.0 4,823,218 + AO353_22020 0.41 -0.0 4,823,219 - AO353_22020 0.42 -0.3 4,823,219 - AO353_22020 0.42 +0.2 4,823,219 - AO353_22020 0.42 +0.0 4,823,219 - AO353_22020 0.42 -0.4 4,823,219 - AO353_22020 0.42 +0.3 4,823,219 - AO353_22020 0.42 +0.7 4,823,219 - AO353_22020 0.42 +1.1 4,823,220 + AO353_22020 0.42 +1.0 4,823,221 - AO353_22020 0.42 -1.0 4,823,221 - AO353_22020 0.42 -1.2 4,823,221 - AO353_22020 0.42 -0.3 4,823,291 + AO353_22020 0.58 -0.5 4,823,291 + AO353_22020 0.58 +0.3 4,823,291 + AO353_22020 0.58 -0.2 4,823,340 + AO353_22020 0.69 +1.0 4,823,340 + AO353_22020 0.69 -0.2 4,823,340 + AO353_22020 0.69 -0.1 4,823,340 + AO353_22020 0.69 +0.2 4,823,341 - AO353_22020 0.69 +1.0 4,823,341 - AO353_22020 0.69 +1.0 4,823,341 - AO353_22020 0.69 -0.0 4,823,341 - AO353_22020 0.69 +0.4 4,823,341 - AO353_22020 0.69 +1.0 4,823,460 + -0.8 4,823,460 + -0.7 4,823,461 - +3.3 4,823,492 + -3.9 4,823,493 - +1.7 4,823,685 + AO353_22025 0.20 +0.7 4,823,685 + AO353_22025 0.20 +1.0 4,823,685 + -1.3 4,823,686 - AO353_22025 0.20 -2.5 4,824,150 - AO353_22025 0.89 -0.0 4,824,150 - AO353_22025 0.89 +0.7 4,824,150 - AO353_22025 0.89 -2.3 4,824,235 + -0.3 4,824,236 - +0.7 4,824,236 - -0.3 4,824,236 - -2.1 4,824,282 + -0.6 4,824,315 + +0.7 4,824,327 + -1.5 4,824,327 + -0.9 4,824,328 - -1.3 4,824,361 + +0.5 4,824,361 + +0.1 4,824,361 + +1.1 4,824,361 + -0.3 4,824,362 - -0.9 4,824,362 - -0.1 4,824,362 - +0.1 4,824,362 - -0.6 4,824,368 + +0.2 4,824,372 + -1.5 4,824,372 + +0.7 4,824,372 + -0.7 4,824,372 + -0.3 4,824,372 + -0.9 4,824,372 + +1.7 4,824,372 + +2.4 4,824,373 - +1.2 4,824,373 - +0.2 4,824,375 + -2.5 4,824,375 + +2.0 4,824,375 + +0.2 4,824,376 - -0.1 4,824,466 + -0.9 4,824,466 + +0.3 4,824,467 - +0.7
Or see this region's nucleotide sequence