Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20655 and AO353_20660 are separated by 213 nucleotides AO353_20660 and AO353_20665 are separated by 63 nucleotides AO353_20665 and AO353_20670 are separated by 218 nucleotides
AO353_20655: AO353_20655 - (Fe-S)-binding protein, at 4,533,015 to 4,533,674
_20655
AO353_20660: AO353_20660 - pseudouridine synthase, at 4,533,888 to 4,534,712
_20660
AO353_20665: AO353_20665 - N-(5'-phosphoribosyl)anthranilate isomerase, at 4,534,776 to 4,535,399
_20665
AO353_20670: AO353_20670 - acetyl-CoA carboxylase subunit beta, at 4,535,618 to 4,536,538
_20670
Position (kb)
4533
4534
4535 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4532.940 kb on + strand at 4532.941 kb on - strand at 4532.941 kb on - strand at 4532.941 kb on - strand at 4532.960 kb on + strand at 4532.961 kb on - strand at 4533.016 kb on + strand at 4533.016 kb on + strand at 4533.017 kb on - strand at 4533.017 kb on - strand at 4533.017 kb on - strand at 4533.017 kb on - strand at 4533.017 kb on - strand at 4533.017 kb on - strand at 4533.017 kb on - strand at 4533.034 kb on + strand at 4533.034 kb on + strand at 4533.035 kb on - strand at 4533.115 kb on + strand, within AO353_20655 at 4533.116 kb on - strand, within AO353_20655 at 4533.136 kb on + strand, within AO353_20655 at 4533.137 kb on - strand, within AO353_20655 at 4533.137 kb on - strand, within AO353_20655 at 4533.137 kb on - strand, within AO353_20655 at 4533.253 kb on + strand, within AO353_20655 at 4533.254 kb on - strand, within AO353_20655 at 4533.254 kb on - strand, within AO353_20655 at 4533.254 kb on - strand, within AO353_20655 at 4533.254 kb on - strand, within AO353_20655 at 4533.375 kb on + strand, within AO353_20655 at 4533.375 kb on + strand, within AO353_20655 at 4533.375 kb on + strand, within AO353_20655 at 4533.375 kb on + strand, within AO353_20655 at 4533.376 kb on - strand, within AO353_20655 at 4533.376 kb on - strand, within AO353_20655 at 4533.376 kb on - strand, within AO353_20655 at 4533.376 kb on - strand, within AO353_20655 at 4533.376 kb on - strand, within AO353_20655 at 4533.376 kb on - strand, within AO353_20655 at 4533.376 kb on - strand, within AO353_20655 at 4533.376 kb on - strand, within AO353_20655 at 4533.376 kb on - strand, within AO353_20655 at 4533.519 kb on + strand, within AO353_20655 at 4533.519 kb on + strand, within AO353_20655 at 4533.519 kb on + strand, within AO353_20655 at 4533.520 kb on - strand, within AO353_20655 at 4533.637 kb on + strand at 4533.637 kb on + strand at 4533.695 kb on + strand at 4533.696 kb on - strand at 4533.696 kb on - strand at 4533.707 kb on + strand at 4533.708 kb on - strand at 4533.716 kb on - strand at 4533.716 kb on - strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.719 kb on + strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.720 kb on - strand at 4533.721 kb on + strand at 4533.722 kb on - strand at 4533.722 kb on - strand at 4533.723 kb on + strand at 4533.763 kb on + strand at 4533.817 kb on + strand at 4533.817 kb on + strand at 4533.817 kb on + strand at 4533.818 kb on + strand at 4533.818 kb on - strand at 4533.819 kb on + strand at 4533.819 kb on + strand at 4533.819 kb on + strand at 4533.819 kb on + strand at 4533.819 kb on + strand at 4533.819 kb on + strand at 4533.819 kb on + strand at 4533.819 kb on + strand at 4533.819 kb on + strand at 4533.819 kb on + strand at 4533.820 kb on - strand at 4533.820 kb on - strand at 4533.820 kb on - strand at 4533.820 kb on - strand at 4533.820 kb on - strand at 4533.820 kb on - strand at 4533.820 kb on - strand at 4533.820 kb on - strand at 4533.820 kb on - strand at 4533.820 kb on - strand at 4533.820 kb on - strand at 4533.820 kb on - strand at 4533.836 kb on + strand at 4533.836 kb on + strand at 4533.837 kb on - strand at 4533.837 kb on - strand at 4533.866 kb on + strand at 4533.866 kb on + strand at 4533.866 kb on + strand at 4533.867 kb on - strand at 4533.867 kb on - strand at 4533.867 kb on - strand at 4533.867 kb on - strand at 4533.868 kb on + strand at 4533.868 kb on + strand at 4533.868 kb on + strand at 4533.868 kb on + strand at 4533.868 kb on + strand at 4533.869 kb on - strand at 4533.869 kb on - strand at 4533.869 kb on - strand at 4533.869 kb on - strand at 4533.873 kb on - strand at 4533.873 kb on - strand at 4533.930 kb on + strand at 4533.931 kb on - strand at 4533.991 kb on + strand, within AO353_20660 at 4533.992 kb on - strand, within AO353_20660 at 4534.248 kb on + strand, within AO353_20660 at 4534.249 kb on - strand, within AO353_20660 at 4534.249 kb on - strand, within AO353_20660 at 4534.617 kb on + strand, within AO353_20660 at 4534.617 kb on + strand, within AO353_20660 at 4534.618 kb on - strand, within AO353_20660 at 4534.618 kb on - strand, within AO353_20660 at 4534.618 kb on - strand, within AO353_20660 at 4534.618 kb on - strand, within AO353_20660 at 4534.635 kb on + strand at 4534.665 kb on + strand at 4534.665 kb on + strand at 4534.665 kb on + strand at 4534.666 kb on - strand at 4534.666 kb on - strand at 4534.666 kb on - strand at 4534.666 kb on - strand at 4534.666 kb on - strand at 4534.872 kb on + strand, within AO353_20665 at 4534.872 kb on + strand, within AO353_20665 at 4534.872 kb on + strand, within AO353_20665 at 4534.872 kb on + strand, within AO353_20665 at 4534.872 kb on + strand, within AO353_20665 at 4534.873 kb on - strand, within AO353_20665 at 4534.873 kb on - strand, within AO353_20665 at 4534.873 kb on - strand, within AO353_20665 at 4534.873 kb on - strand, within AO353_20665 at 4535.062 kb on - strand, within AO353_20665 at 4535.073 kb on + strand, within AO353_20665 at 4535.073 kb on + strand, within AO353_20665 at 4535.073 kb on + strand, within AO353_20665 at 4535.073 kb on + strand, within AO353_20665 at 4535.073 kb on + strand, within AO353_20665 at 4535.073 kb on + strand, within AO353_20665 at 4535.073 kb on + strand, within AO353_20665 at 4535.074 kb on - strand, within AO353_20665 at 4535.074 kb on - strand, within AO353_20665 at 4535.074 kb on - strand, within AO353_20665 at 4535.074 kb on - strand, within AO353_20665 at 4535.074 kb on - strand, within AO353_20665 at 4535.077 kb on + strand, within AO353_20665 at 4535.077 kb on + strand, within AO353_20665 at 4535.077 kb on + strand, within AO353_20665 at 4535.077 kb on + strand, within AO353_20665 at 4535.077 kb on + strand, within AO353_20665 at 4535.077 kb on + strand, within AO353_20665 at 4535.077 kb on + strand, within AO353_20665 at 4535.078 kb on - strand, within AO353_20665 at 4535.078 kb on - strand, within AO353_20665 at 4535.160 kb on - strand, within AO353_20665 at 4535.160 kb on - strand, within AO353_20665 at 4535.160 kb on - strand, within AO353_20665 at 4535.163 kb on + strand, within AO353_20665 at 4535.163 kb on + strand, within AO353_20665 at 4535.163 kb on + strand, within AO353_20665 at 4535.163 kb on + strand, within AO353_20665 at 4535.163 kb on + strand, within AO353_20665 at 4535.163 kb on + strand, within AO353_20665 at 4535.163 kb on + strand, within AO353_20665 at 4535.163 kb on + strand, within AO353_20665 at 4535.163 kb on + strand, within AO353_20665 at 4535.164 kb on - strand, within AO353_20665 at 4535.164 kb on - strand, within AO353_20665 at 4535.164 kb on - strand, within AO353_20665 at 4535.164 kb on - strand, within AO353_20665 at 4535.164 kb on - strand, within AO353_20665 at 4535.164 kb on - strand, within AO353_20665 at 4535.164 kb on - strand, within AO353_20665 at 4535.164 kb on - strand, within AO353_20665 at 4535.164 kb on - strand, within AO353_20665 at 4535.164 kb on - strand, within AO353_20665 at 4535.326 kb on + strand, within AO353_20665 at 4535.374 kb on + strand at 4535.374 kb on + strand at 4535.374 kb on + strand at 4535.374 kb on + strand at 4535.390 kb on + strand at 4535.390 kb on + strand at 4535.397 kb on + strand at 4535.441 kb on + strand at 4535.454 kb on + strand at 4535.454 kb on + strand at 4535.454 kb on + strand at 4535.454 kb on + strand at 4535.454 kb on + strand at 4535.454 kb on + strand at 4535.454 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 4,532,940 + -0.1 4,532,941 - +0.8 4,532,941 - -0.2 4,532,941 - -0.6 4,532,960 + -1.7 4,532,961 - +0.2 4,533,016 + -0.6 4,533,016 + -1.2 4,533,017 - +0.2 4,533,017 - +0.4 4,533,017 - -2.0 4,533,017 - -0.2 4,533,017 - +1.3 4,533,017 - -0.6 4,533,017 - +0.8 4,533,034 + +0.4 4,533,034 + -0.4 4,533,035 - +0.4 4,533,115 + AO353_20655 0.15 -1.6 4,533,116 - AO353_20655 0.15 +0.3 4,533,136 + AO353_20655 0.18 +0.2 4,533,137 - AO353_20655 0.18 +0.4 4,533,137 - AO353_20655 0.18 -0.2 4,533,137 - AO353_20655 0.18 +0.8 4,533,253 + AO353_20655 0.36 -0.2 4,533,254 - AO353_20655 0.36 +0.0 4,533,254 - AO353_20655 0.36 +0.5 4,533,254 - AO353_20655 0.36 +0.1 4,533,254 - AO353_20655 0.36 +0.4 4,533,375 + AO353_20655 0.55 -0.9 4,533,375 + AO353_20655 0.55 +1.0 4,533,375 + AO353_20655 0.55 +0.9 4,533,375 + AO353_20655 0.55 +0.1 4,533,376 - AO353_20655 0.55 -1.0 4,533,376 - AO353_20655 0.55 -0.1 4,533,376 - AO353_20655 0.55 +0.8 4,533,376 - AO353_20655 0.55 +1.8 4,533,376 - AO353_20655 0.55 +0.6 4,533,376 - AO353_20655 0.55 -0.0 4,533,376 - AO353_20655 0.55 -2.0 4,533,376 - AO353_20655 0.55 -0.8 4,533,376 - AO353_20655 0.55 -0.8 4,533,519 + AO353_20655 0.76 -2.0 4,533,519 + AO353_20655 0.76 -2.4 4,533,519 + AO353_20655 0.76 -0.1 4,533,520 - AO353_20655 0.77 +0.9 4,533,637 + -2.2 4,533,637 + -1.2 4,533,695 + +0.4 4,533,696 - -2.2 4,533,696 - -1.0 4,533,707 + +1.8 4,533,708 - -0.5 4,533,716 - -1.6 4,533,716 - -2.0 4,533,719 + -0.8 4,533,719 + +0.4 4,533,719 + +0.0 4,533,719 + -1.3 4,533,719 + +1.8 4,533,719 + -0.9 4,533,719 + -1.2 4,533,719 + -1.6 4,533,719 + -0.6 4,533,719 + -0.5 4,533,719 + +0.7 4,533,719 + -0.1 4,533,719 + +0.2 4,533,719 + +0.0 4,533,719 + +0.2 4,533,719 + -0.2 4,533,719 + +0.4 4,533,719 + +1.5 4,533,719 + -0.5 4,533,719 + -0.9 4,533,720 - -0.8 4,533,720 - -0.7 4,533,720 - -0.2 4,533,720 - -0.6 4,533,720 - -0.2 4,533,720 - +1.8 4,533,720 - -2.0 4,533,720 - -2.2 4,533,720 - -1.2 4,533,720 - -0.5 4,533,720 - +0.8 4,533,720 - +0.5 4,533,720 - -0.0 4,533,720 - -0.4 4,533,720 - -2.0 4,533,720 - -0.0 4,533,720 - +0.3 4,533,720 - +1.2 4,533,720 - +0.8 4,533,720 - -0.8 4,533,720 - +0.2 4,533,720 - -1.2 4,533,720 - -1.6 4,533,720 - +0.2 4,533,720 - -2.0 4,533,720 - -0.5 4,533,720 - -2.4 4,533,721 + +1.8 4,533,722 - +0.8 4,533,722 - +1.5 4,533,723 + -1.9 4,533,763 + -0.5 4,533,817 + -0.2 4,533,817 + +0.2 4,533,817 + +1.3 4,533,818 + -0.8 4,533,818 - +2.9 4,533,819 + -0.4 4,533,819 + -0.6 4,533,819 + -1.8 4,533,819 + +0.0 4,533,819 + +0.8 4,533,819 + +0.1 4,533,819 + +0.3 4,533,819 + -1.8 4,533,819 + +0.8 4,533,819 + -2.0 4,533,820 - -0.2 4,533,820 - -1.2 4,533,820 - -0.2 4,533,820 - -0.2 4,533,820 - -2.0 4,533,820 - -0.6 4,533,820 - -0.8 4,533,820 - -1.6 4,533,820 - -2.6 4,533,820 - +0.8 4,533,820 - -2.2 4,533,820 - +0.2 4,533,836 + +0.2 4,533,836 + +2.6 4,533,837 - -0.8 4,533,837 - -2.7 4,533,866 + -1.1 4,533,866 + -1.0 4,533,866 + +0.7 4,533,867 - -2.4 4,533,867 - -2.8 4,533,867 - -0.2 4,533,867 - -1.2 4,533,868 + -1.0 4,533,868 + -2.0 4,533,868 + +0.8 4,533,868 + +1.8 4,533,868 + -1.4 4,533,869 - -1.2 4,533,869 - -0.7 4,533,869 - -0.2 4,533,869 - -0.2 4,533,873 - +1.8 4,533,873 - -2.0 4,533,930 + +0.2 4,533,931 - -1.6 4,533,991 + AO353_20660 0.12 -0.7 4,533,992 - AO353_20660 0.13 -1.6 4,534,248 + AO353_20660 0.44 -1.4 4,534,249 - AO353_20660 0.44 -0.2 4,534,249 - AO353_20660 0.44 -0.8 4,534,617 + AO353_20660 0.88 -1.2 4,534,617 + AO353_20660 0.88 -0.8 4,534,618 - AO353_20660 0.88 -1.8 4,534,618 - AO353_20660 0.88 -0.5 4,534,618 - AO353_20660 0.88 -0.9 4,534,618 - AO353_20660 0.88 -1.2 4,534,635 + +0.8 4,534,665 + +0.8 4,534,665 + -2.4 4,534,665 + -0.2 4,534,666 - -0.2 4,534,666 - -3.2 4,534,666 - -2.2 4,534,666 - +0.5 4,534,666 - -0.6 4,534,872 + AO353_20665 0.15 -0.7 4,534,872 + AO353_20665 0.15 -0.8 4,534,872 + AO353_20665 0.15 -1.4 4,534,872 + AO353_20665 0.15 -1.1 4,534,872 + AO353_20665 0.15 -0.5 4,534,873 - AO353_20665 0.16 -0.8 4,534,873 - AO353_20665 0.16 +0.9 4,534,873 - AO353_20665 0.16 -1.0 4,534,873 - AO353_20665 0.16 -1.1 4,535,062 - AO353_20665 0.46 +0.2 4,535,073 + AO353_20665 0.48 +1.3 4,535,073 + AO353_20665 0.48 +1.3 4,535,073 + AO353_20665 0.48 +0.3 4,535,073 + AO353_20665 0.48 -0.9 4,535,073 + AO353_20665 0.48 -0.7 4,535,073 + AO353_20665 0.48 +0.3 4,535,073 + AO353_20665 0.48 -1.8 4,535,074 - AO353_20665 0.48 -0.5 4,535,074 - AO353_20665 0.48 +1.9 4,535,074 - AO353_20665 0.48 -2.2 4,535,074 - AO353_20665 0.48 -2.9 4,535,074 - AO353_20665 0.48 -1.8 4,535,077 + AO353_20665 0.48 -1.0 4,535,077 + AO353_20665 0.48 +1.9 4,535,077 + AO353_20665 0.48 -1.1 4,535,077 + AO353_20665 0.48 -0.7 4,535,077 + AO353_20665 0.48 -1.2 4,535,077 + AO353_20665 0.48 +0.3 4,535,077 + AO353_20665 0.48 -1.8 4,535,078 - AO353_20665 0.48 -2.0 4,535,078 - AO353_20665 0.48 +0.4 4,535,160 - AO353_20665 0.62 +0.8 4,535,160 - AO353_20665 0.62 -0.3 4,535,160 - AO353_20665 0.62 -0.1 4,535,163 + AO353_20665 0.62 -0.2 4,535,163 + AO353_20665 0.62 +0.5 4,535,163 + AO353_20665 0.62 +0.3 4,535,163 + AO353_20665 0.62 +0.0 4,535,163 + AO353_20665 0.62 -0.4 4,535,163 + AO353_20665 0.62 -2.0 4,535,163 + AO353_20665 0.62 -0.8 4,535,163 + AO353_20665 0.62 +0.0 4,535,163 + AO353_20665 0.62 -0.4 4,535,164 - AO353_20665 0.62 +1.5 4,535,164 - AO353_20665 0.62 +1.0 4,535,164 - AO353_20665 0.62 -0.8 4,535,164 - AO353_20665 0.62 +1.1 4,535,164 - AO353_20665 0.62 +0.6 4,535,164 - AO353_20665 0.62 +1.0 4,535,164 - AO353_20665 0.62 -0.3 4,535,164 - AO353_20665 0.62 +1.8 4,535,164 - AO353_20665 0.62 -0.2 4,535,164 - AO353_20665 0.62 -0.2 4,535,326 + AO353_20665 0.88 -0.2 4,535,374 + +1.8 4,535,374 + -0.2 4,535,374 + -1.0 4,535,374 + -1.1 4,535,390 + +0.3 4,535,390 + -0.2 4,535,397 + +0.0 4,535,441 + -1.2 4,535,454 + +0.3 4,535,454 + -0.2 4,535,454 + +1.2 4,535,454 + +0.0 4,535,454 + -0.2 4,535,454 + -1.7 4,535,454 + +0.1
Or see this region's nucleotide sequence