Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_17855 and AO353_17860 overlap by 4 nucleotides AO353_17860 and AO353_17865 are separated by 127 nucleotides
AO353_17855: AO353_17855 - ribonuclease D, at 3,932,561 to 3,933,694
_17855
AO353_17860: AO353_17860 - hypothetical protein, at 3,933,691 to 3,933,984
_17860
AO353_17865: AO353_17865 - hydroxyacid dehydrogenase, at 3,934,112 to 3,935,044
_17865
Position (kb)
3933
3934 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3932.891 kb on + strand, within AO353_17855 at 3932.892 kb on - strand, within AO353_17855 at 3933.018 kb on - strand, within AO353_17855 at 3933.089 kb on + strand, within AO353_17855 at 3933.152 kb on + strand, within AO353_17855 at 3933.603 kb on - strand at 3933.699 kb on + strand at 3933.699 kb on + strand at 3933.699 kb on + strand at 3933.699 kb on + strand at 3933.699 kb on + strand at 3933.700 kb on - strand at 3933.700 kb on - strand at 3933.700 kb on - strand at 3933.700 kb on - strand at 3933.708 kb on + strand at 3933.709 kb on - strand at 3933.709 kb on - strand at 3933.709 kb on - strand at 3933.709 kb on - strand at 3933.712 kb on + strand at 3933.712 kb on + strand at 3933.713 kb on - strand at 3933.713 kb on - strand at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.739 kb on + strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.740 kb on - strand, within AO353_17860 at 3933.745 kb on + strand, within AO353_17860 at 3933.745 kb on + strand, within AO353_17860 at 3933.745 kb on + strand, within AO353_17860 at 3933.745 kb on + strand, within AO353_17860 at 3933.745 kb on + strand, within AO353_17860 at 3933.745 kb on + strand, within AO353_17860 at 3933.745 kb on + strand, within AO353_17860 at 3933.745 kb on + strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.746 kb on - strand, within AO353_17860 at 3933.901 kb on + strand, within AO353_17860 at 3933.901 kb on + strand, within AO353_17860 at 3933.934 kb on + strand, within AO353_17860 at 3933.934 kb on + strand, within AO353_17860 at 3933.935 kb on - strand, within AO353_17860 at 3933.935 kb on - strand, within AO353_17860 at 3933.962 kb on + strand at 3933.962 kb on + strand at 3933.962 kb on + strand at 3933.963 kb on - strand at 3933.963 kb on - strand at 3933.969 kb on + strand at 3933.969 kb on + strand at 3933.969 kb on + strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.970 kb on - strand at 3933.995 kb on + strand at 3933.996 kb on - strand at 3934.036 kb on - strand at 3934.146 kb on + strand at 3934.146 kb on + strand at 3934.146 kb on + strand at 3934.146 kb on + strand at 3934.146 kb on + strand at 3934.146 kb on + strand at 3934.146 kb on + strand at 3934.146 kb on + strand at 3934.146 kb on + strand at 3934.146 kb on + strand at 3934.146 kb on + strand at 3934.146 kb on + strand at 3934.146 kb on + strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.147 kb on - strand at 3934.148 kb on + strand at 3934.148 kb on + strand at 3934.148 kb on + strand at 3934.148 kb on + strand at 3934.148 kb on + strand at 3934.148 kb on + strand at 3934.149 kb on - strand at 3934.149 kb on - strand at 3934.149 kb on - strand at 3934.149 kb on - strand at 3934.149 kb on - strand at 3934.188 kb on + strand at 3934.188 kb on + strand at 3934.188 kb on + strand at 3934.188 kb on + strand at 3934.189 kb on - strand at 3934.327 kb on + strand, within AO353_17865 at 3934.327 kb on + strand, within AO353_17865 at 3934.327 kb on + strand, within AO353_17865 at 3934.327 kb on + strand, within AO353_17865 at 3934.327 kb on + strand, within AO353_17865 at 3934.327 kb on + strand, within AO353_17865 at 3934.327 kb on + strand, within AO353_17865 at 3934.327 kb on + strand, within AO353_17865 at 3934.328 kb on - strand, within AO353_17865 at 3934.328 kb on - strand, within AO353_17865 at 3934.409 kb on + strand, within AO353_17865 at 3934.409 kb on + strand, within AO353_17865 at 3934.409 kb on + strand, within AO353_17865 at 3934.409 kb on + strand, within AO353_17865 at 3934.409 kb on + strand, within AO353_17865 at 3934.409 kb on + strand, within AO353_17865 at 3934.409 kb on + strand, within AO353_17865 at 3934.409 kb on + strand, within AO353_17865 at 3934.409 kb on + strand, within AO353_17865 at 3934.409 kb on + strand, within AO353_17865 at 3934.409 kb on + strand, within AO353_17865 at 3934.409 kb on + strand, within AO353_17865 at 3934.410 kb on - strand, within AO353_17865 at 3934.410 kb on - strand, within AO353_17865 at 3934.410 kb on - strand, within AO353_17865 at 3934.410 kb on - strand, within AO353_17865 at 3934.410 kb on - strand, within AO353_17865 at 3934.410 kb on - strand, within AO353_17865 at 3934.410 kb on - strand, within AO353_17865 at 3934.410 kb on - strand, within AO353_17865 at 3934.421 kb on + strand, within AO353_17865 at 3934.421 kb on + strand, within AO353_17865 at 3934.421 kb on + strand, within AO353_17865 at 3934.421 kb on + strand, within AO353_17865 at 3934.421 kb on + strand, within AO353_17865 at 3934.422 kb on - strand, within AO353_17865 at 3934.422 kb on - strand, within AO353_17865 at 3934.422 kb on - strand, within AO353_17865 at 3934.422 kb on - strand, within AO353_17865 at 3934.422 kb on - strand, within AO353_17865 at 3934.422 kb on - strand, within AO353_17865 at 3934.422 kb on - strand, within AO353_17865 at 3934.422 kb on - strand, within AO353_17865 at 3934.422 kb on - strand, within AO353_17865 at 3934.606 kb on + strand at 3934.682 kb on + strand, within AO353_17865 at 3934.682 kb on + strand, within AO353_17865 at 3934.682 kb on + strand at 3934.682 kb on + strand, within AO353_17865 at 3934.682 kb on + strand, within AO353_17865 at 3934.683 kb on - strand, within AO353_17865 at 3934.683 kb on - strand, within AO353_17865 at 3934.683 kb on - strand, within AO353_17865 at 3934.683 kb on - strand, within AO353_17865 at 3934.683 kb on - strand, within AO353_17865 at 3934.705 kb on + strand, within AO353_17865 at 3934.705 kb on + strand, within AO353_17865 at 3934.705 kb on + strand, within AO353_17865 at 3934.705 kb on + strand, within AO353_17865 at 3934.706 kb on - strand, within AO353_17865 at 3934.727 kb on + strand, within AO353_17865 at 3934.728 kb on - strand, within AO353_17865 at 3934.728 kb on - strand, within AO353_17865 at 3934.728 kb on - strand, within AO353_17865 at 3934.728 kb on - strand, within AO353_17865 at 3934.815 kb on + strand, within AO353_17865 at 3934.942 kb on + strand, within AO353_17865 at 3934.943 kb on - strand, within AO353_17865 at 3934.943 kb on - strand, within AO353_17865 at 3934.943 kb on - strand, within AO353_17865 at 3934.943 kb on - strand, within AO353_17865
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 3,932,891 + AO353_17855 0.29 -1.4 3,932,892 - AO353_17855 0.29 +1.0 3,933,018 - AO353_17855 0.40 -0.8 3,933,089 + AO353_17855 0.47 +0.5 3,933,152 + AO353_17855 0.52 -0.6 3,933,603 - -1.6 3,933,699 + -0.9 3,933,699 + +0.1 3,933,699 + -0.4 3,933,699 + +1.0 3,933,699 + -0.4 3,933,700 - +1.0 3,933,700 - -1.1 3,933,700 - -0.0 3,933,700 - -1.7 3,933,708 + -1.3 3,933,709 - +0.8 3,933,709 - +0.2 3,933,709 - -1.2 3,933,709 - -1.1 3,933,712 + -1.7 3,933,712 + +1.3 3,933,713 - +1.6 3,933,713 - +1.2 3,933,739 + AO353_17860 0.16 +1.2 3,933,739 + AO353_17860 0.16 -0.7 3,933,739 + AO353_17860 0.16 +0.2 3,933,739 + AO353_17860 0.16 -0.4 3,933,739 + AO353_17860 0.16 +0.1 3,933,739 + AO353_17860 0.16 -1.6 3,933,739 + AO353_17860 0.16 +0.2 3,933,739 + AO353_17860 0.16 +1.7 3,933,739 + AO353_17860 0.16 +1.0 3,933,739 + AO353_17860 0.16 -2.4 3,933,739 + AO353_17860 0.16 -0.8 3,933,739 + AO353_17860 0.16 +0.7 3,933,739 + AO353_17860 0.16 +1.6 3,933,739 + AO353_17860 0.16 -0.0 3,933,739 + AO353_17860 0.16 -3.1 3,933,740 - AO353_17860 0.17 -0.2 3,933,740 - AO353_17860 0.17 -1.1 3,933,740 - AO353_17860 0.17 -1.4 3,933,740 - AO353_17860 0.17 +0.7 3,933,740 - AO353_17860 0.17 -1.4 3,933,740 - AO353_17860 0.17 -1.0 3,933,740 - AO353_17860 0.17 +1.0 3,933,740 - AO353_17860 0.17 -1.0 3,933,740 - AO353_17860 0.17 -0.6 3,933,740 - AO353_17860 0.17 -1.4 3,933,740 - AO353_17860 0.17 -1.0 3,933,740 - AO353_17860 0.17 +2.7 3,933,740 - AO353_17860 0.17 +1.0 3,933,740 - AO353_17860 0.17 +0.8 3,933,740 - AO353_17860 0.17 +1.2 3,933,740 - AO353_17860 0.17 +1.0 3,933,740 - AO353_17860 0.17 +0.6 3,933,740 - AO353_17860 0.17 -0.6 3,933,745 + AO353_17860 0.18 -0.4 3,933,745 + AO353_17860 0.18 -2.0 3,933,745 + AO353_17860 0.18 -2.2 3,933,745 + AO353_17860 0.18 +0.6 3,933,745 + AO353_17860 0.18 +0.7 3,933,745 + AO353_17860 0.18 +1.0 3,933,745 + AO353_17860 0.18 +0.6 3,933,745 + AO353_17860 0.18 +1.0 3,933,746 - AO353_17860 0.19 -1.6 3,933,746 - AO353_17860 0.19 +0.9 3,933,746 - AO353_17860 0.19 +0.8 3,933,746 - AO353_17860 0.19 +1.0 3,933,746 - AO353_17860 0.19 -1.0 3,933,746 - AO353_17860 0.19 -0.1 3,933,746 - AO353_17860 0.19 +1.0 3,933,746 - AO353_17860 0.19 -1.8 3,933,746 - AO353_17860 0.19 -0.4 3,933,746 - AO353_17860 0.19 -0.5 3,933,746 - AO353_17860 0.19 +1.2 3,933,746 - AO353_17860 0.19 -1.4 3,933,746 - AO353_17860 0.19 -0.2 3,933,746 - AO353_17860 0.19 +0.2 3,933,901 + AO353_17860 0.71 +1.0 3,933,901 + AO353_17860 0.71 -1.1 3,933,934 + AO353_17860 0.83 +0.6 3,933,934 + AO353_17860 0.83 +0.4 3,933,935 - AO353_17860 0.83 +1.7 3,933,935 - AO353_17860 0.83 +1.0 3,933,962 + -0.5 3,933,962 + +0.6 3,933,962 + -0.6 3,933,963 - -0.0 3,933,963 - -1.8 3,933,969 + -0.4 3,933,969 + -0.9 3,933,969 + +0.4 3,933,970 - -1.8 3,933,970 - -2.2 3,933,970 - -1.4 3,933,970 - -0.6 3,933,970 - +1.0 3,933,970 - +0.7 3,933,970 - +1.3 3,933,970 - +0.2 3,933,970 - +0.2 3,933,970 - -1.3 3,933,970 - -0.6 3,933,970 - -0.6 3,933,970 - +1.0 3,933,970 - -1.2 3,933,970 - +1.0 3,933,970 - -0.4 3,933,970 - -1.0 3,933,995 + -1.3 3,933,996 - +1.4 3,934,036 - -0.3 3,934,146 + +0.0 3,934,146 + +0.6 3,934,146 + -1.5 3,934,146 + -0.9 3,934,146 + -1.0 3,934,146 + -0.0 3,934,146 + -0.5 3,934,146 + -1.4 3,934,146 + -1.8 3,934,146 + +0.3 3,934,146 + -1.5 3,934,146 + -0.1 3,934,146 + -0.4 3,934,147 - -0.2 3,934,147 - -0.0 3,934,147 - -0.0 3,934,147 - +1.2 3,934,147 - +1.3 3,934,147 - -0.4 3,934,147 - +0.6 3,934,147 - -0.8 3,934,147 - -0.8 3,934,147 - +0.5 3,934,147 - +2.0 3,934,147 - +1.1 3,934,147 - -1.4 3,934,147 - +0.2 3,934,147 - -0.5 3,934,147 - -1.4 3,934,147 - -1.2 3,934,147 - +0.6 3,934,147 - -1.8 3,934,148 + -0.9 3,934,148 + -1.4 3,934,148 + +0.2 3,934,148 + -1.0 3,934,148 + -1.2 3,934,148 + +1.0 3,934,149 - -1.5 3,934,149 - -1.6 3,934,149 - +1.6 3,934,149 - +0.4 3,934,149 - -0.2 3,934,188 + -1.4 3,934,188 + -0.2 3,934,188 + -1.2 3,934,188 + +0.1 3,934,189 - -0.4 3,934,327 + AO353_17865 0.23 -0.6 3,934,327 + AO353_17865 0.23 -1.4 3,934,327 + AO353_17865 0.23 -1.8 3,934,327 + AO353_17865 0.23 +0.7 3,934,327 + AO353_17865 0.23 -0.1 3,934,327 + AO353_17865 0.23 -0.8 3,934,327 + AO353_17865 0.23 +0.2 3,934,327 + AO353_17865 0.23 +1.6 3,934,328 - AO353_17865 0.23 -0.6 3,934,328 - AO353_17865 0.23 -1.0 3,934,409 + AO353_17865 0.32 -1.6 3,934,409 + AO353_17865 0.32 -0.4 3,934,409 + AO353_17865 0.32 +1.6 3,934,409 + AO353_17865 0.32 -0.0 3,934,409 + AO353_17865 0.32 +0.4 3,934,409 + AO353_17865 0.32 +1.1 3,934,409 + AO353_17865 0.32 -0.0 3,934,409 + AO353_17865 0.32 -0.0 3,934,409 + AO353_17865 0.32 -0.0 3,934,409 + AO353_17865 0.32 -0.8 3,934,409 + AO353_17865 0.32 +1.2 3,934,409 + AO353_17865 0.32 -1.4 3,934,410 - AO353_17865 0.32 +0.6 3,934,410 - AO353_17865 0.32 -0.4 3,934,410 - AO353_17865 0.32 -0.6 3,934,410 - AO353_17865 0.32 -0.3 3,934,410 - AO353_17865 0.32 +0.6 3,934,410 - AO353_17865 0.32 -1.8 3,934,410 - AO353_17865 0.32 -0.8 3,934,410 - AO353_17865 0.32 -0.0 3,934,421 + AO353_17865 0.33 +1.0 3,934,421 + AO353_17865 0.33 +0.7 3,934,421 + AO353_17865 0.33 +0.5 3,934,421 + AO353_17865 0.33 -0.2 3,934,421 + AO353_17865 0.33 +0.2 3,934,422 - AO353_17865 0.33 -0.6 3,934,422 - AO353_17865 0.33 -0.2 3,934,422 - AO353_17865 0.33 -0.0 3,934,422 - AO353_17865 0.33 +1.4 3,934,422 - AO353_17865 0.33 +0.6 3,934,422 - AO353_17865 0.33 -2.4 3,934,422 - AO353_17865 0.33 +0.1 3,934,422 - AO353_17865 0.33 +0.7 3,934,422 - AO353_17865 0.33 -0.0 3,934,606 + -0.0 3,934,682 + AO353_17865 0.61 +0.6 3,934,682 + AO353_17865 0.61 +1.3 3,934,682 + +2.6 3,934,682 + AO353_17865 0.61 +0.7 3,934,682 + AO353_17865 0.61 -1.4 3,934,683 - AO353_17865 0.61 +0.2 3,934,683 - AO353_17865 0.61 +0.4 3,934,683 - AO353_17865 0.61 +2.8 3,934,683 - AO353_17865 0.61 +0.8 3,934,683 - AO353_17865 0.61 +0.2 3,934,705 + AO353_17865 0.64 +1.4 3,934,705 + AO353_17865 0.64 -0.0 3,934,705 + AO353_17865 0.64 +1.0 3,934,705 + AO353_17865 0.64 -0.8 3,934,706 - AO353_17865 0.64 -1.6 3,934,727 + AO353_17865 0.66 -0.8 3,934,728 - AO353_17865 0.66 -2.0 3,934,728 - AO353_17865 0.66 +0.1 3,934,728 - AO353_17865 0.66 +1.4 3,934,728 - AO353_17865 0.66 -0.0 3,934,815 + AO353_17865 0.75 -0.4 3,934,942 + AO353_17865 0.89 +1.8 3,934,943 - AO353_17865 0.89 -0.3 3,934,943 - AO353_17865 0.89 +0.4 3,934,943 - AO353_17865 0.89 -0.6 3,934,943 - AO353_17865 0.89 -0.0
Or see this region's nucleotide sequence