Experiment: Benzalkonium Chloride 0.012 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16555 and AO353_16560 are separated by 163 nucleotides AO353_16560 and AO353_16565 are separated by 333 nucleotides AO353_16565 and AO353_16570 overlap by 4 nucleotides
AO353_16555: AO353_16555 - 2-dehydro-3-deoxyphosphooctonate aldolase, at 3,678,555 to 3,679,400
_16555
AO353_16560: AO353_16560 - enolase, at 3,679,564 to 3,680,853
_16560
AO353_16565: AO353_16565 - cell division protein FtsB, at 3,681,187 to 3,681,465
_16565
AO353_16570: AO353_16570 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 3,681,462 to 3,682,169
_16570
Position (kb)
3679
3680
3681 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3679.421 kb on + strand at 3679.421 kb on + strand at 3679.466 kb on + strand at 3679.466 kb on + strand at 3679.467 kb on - strand at 3679.528 kb on + strand at 3679.529 kb on - strand at 3680.335 kb on + strand, within AO353_16560 at 3680.776 kb on + strand at 3680.824 kb on + strand at 3680.824 kb on + strand at 3680.824 kb on + strand at 3680.824 kb on + strand at 3680.851 kb on + strand at 3680.861 kb on + strand at 3680.861 kb on + strand at 3680.865 kb on + strand at 3680.912 kb on + strand at 3680.968 kb on + strand at 3680.968 kb on + strand at 3680.968 kb on + strand at 3680.968 kb on + strand at 3680.968 kb on + strand at 3680.968 kb on + strand at 3680.968 kb on + strand at 3680.968 kb on + strand at 3680.968 kb on + strand at 3680.977 kb on + strand at 3680.977 kb on + strand at 3680.977 kb on + strand at 3680.977 kb on + strand at 3680.977 kb on + strand at 3680.977 kb on + strand at 3680.977 kb on + strand at 3680.977 kb on + strand at 3681.002 kb on + strand at 3681.010 kb on + strand at 3681.010 kb on + strand at 3681.010 kb on + strand at 3681.010 kb on + strand at 3681.010 kb on + strand at 3681.047 kb on + strand at 3681.054 kb on + strand at 3681.054 kb on + strand at 3681.082 kb on + strand at 3681.095 kb on + strand at 3681.095 kb on + strand at 3681.095 kb on + strand at 3681.095 kb on + strand at 3681.095 kb on + strand at 3681.095 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.097 kb on + strand at 3681.101 kb on + strand at 3681.130 kb on + strand at 3681.142 kb on + strand at 3681.181 kb on + strand at 3681.470 kb on + strand at 3681.470 kb on + strand at 3681.470 kb on + strand at 3681.470 kb on + strand at 3681.470 kb on + strand at 3681.470 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.012 mg/ml remove 3,679,421 + -0.5 3,679,421 + -1.3 3,679,466 + -1.7 3,679,466 + -0.5 3,679,467 - -0.3 3,679,528 + -2.6 3,679,529 - -1.9 3,680,335 + AO353_16560 0.60 +0.1 3,680,776 + -0.5 3,680,824 + +1.5 3,680,824 + -2.7 3,680,824 + +1.1 3,680,824 + +0.9 3,680,851 + -0.4 3,680,861 + +0.6 3,680,861 + -0.6 3,680,865 + +0.2 3,680,912 + +0.2 3,680,968 + +0.1 3,680,968 + -0.5 3,680,968 + -0.6 3,680,968 + -0.0 3,680,968 + -0.2 3,680,968 + -1.3 3,680,968 + +0.1 3,680,968 + +1.5 3,680,968 + +2.1 3,680,977 + -2.4 3,680,977 + -1.9 3,680,977 + +0.4 3,680,977 + -0.3 3,680,977 + +0.7 3,680,977 + +0.7 3,680,977 + +0.8 3,680,977 + -0.3 3,681,002 + +0.1 3,681,010 + -0.5 3,681,010 + +0.7 3,681,010 + +0.8 3,681,010 + -1.9 3,681,010 + -0.4 3,681,047 + -0.9 3,681,054 + -0.9 3,681,054 + -1.9 3,681,082 + +0.7 3,681,095 + +1.1 3,681,095 + -0.0 3,681,095 + -1.9 3,681,095 + -0.5 3,681,095 + -1.7 3,681,095 + -2.4 3,681,097 + +1.1 3,681,097 + -1.1 3,681,097 + +1.1 3,681,097 + +1.1 3,681,097 + +0.8 3,681,097 + -0.5 3,681,097 + +1.0 3,681,097 + -0.7 3,681,097 + +0.4 3,681,097 + +1.3 3,681,097 + -0.5 3,681,097 + -0.5 3,681,097 + -1.1 3,681,097 + -0.4 3,681,101 + +0.1 3,681,130 + +0.7 3,681,142 + -0.7 3,681,181 + -0.5 3,681,470 + -0.5 3,681,470 + -2.6 3,681,470 + -0.3 3,681,470 + -0.7 3,681,470 + -1.3 3,681,470 + -0.6
Or see this region's nucleotide sequence